RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 NUBP1P53384 320 aa28.03■■■□□ 2.08
PPP4R1-204ENST00000577393 SLC2A14Q8TDB8 520 aa28.03■■■□□ 2.08
PPP4R1-204ENST00000577393 WHAMMQ8TF30 809 aa28.03■■■□□ 2.08
PPP4R1-204ENST00000577393 SMARCD1Q96GM5 515 aa28.03■■■□□ 2.08
PPP4R1-204ENST00000577393 DDX23Q9BUQ8 820 aaKnown RBP28.03■■■□□ 2.08
PPP4R1-204ENST00000577393 SRRTQ9BXP5 876 aaKnown RBP28.03■■■□□ 2.08
PPP4R1-204ENST00000577393 FOXQ1Q9C009 403 aa28.03■■■□□ 2.08
PPP4R1-204ENST00000577393 TRPV5Q9NQA5 729 aa28.03■■■□□ 2.08
PPP4R1-204ENST00000577393 FAM49BQ9NUQ9 324 aa28.03■■■□□ 2.08
PPP4R1-204ENST00000577393 EHD2Q9NZN4 543 aa28.03■■■□□ 2.08
PPP4R1-204ENST00000577393 COL4A3Q01955 1670 aa28.03■■■□□ 2.08
PPP4R1-204ENST00000577393 AP1G2O75843 785 aa28.02■■■□□ 2.08
PPP4R1-204ENST00000577393 TPRG1Q6ZUI0 275 aa28.02■■■□□ 2.08
PPP4R1-204ENST00000577393 CELF5Q8N6W0 485 aaKnown RBP28.02■■■□□ 2.08
PPP4R1-204ENST00000577393 BPIFB1Q8TDL5 484 aa28.02■■■□□ 2.08
PPP4R1-204ENST00000577393 USP13Q92995 863 aaPredicted RBP28.02■■■□□ 2.08
PPP4R1-204ENST00000577393 TRPC7Q9HCX4 862 aa28.02■■■□□ 2.08
PPP4R1-204ENST00000577393 KRT82Q9NSB4 513 aa28.02■■■□□ 2.08
PPP4R1-204ENST00000577393 KANSL1LA0AUZ9 987 aa28.01■■■□□ 2.07
PPP4R1-204ENST00000577393 ARNTLO00327 626 aa28.01■■■□□ 2.07
PPP4R1-204ENST00000577393 CHADO15335 359 aa28.01■■■□□ 2.07
PPP4R1-204ENST00000577393 TRIM21P19474 475 aaKnown RBP28.01■■■□□ 2.07
PPP4R1-204ENST00000577393 FMO5P49326 533 aa28.01■■■□□ 2.07
PPP4R1-204ENST00000577393 NUP93Q8N1F7 819 aa28.01■■■□□ 2.07
PPP4R1-204ENST00000577393 GBP4Q96PP9 640 aa28.01■■■□□ 2.07
PPP4R1-204ENST00000577393 ARID3AQ99856 593 aa28.01■■■□□ 2.07
PPP4R1-204ENST00000577393 DMAP1Q9NPF5 467 aaPredicted RBP28.01■■■□□ 2.07
PPP4R1-204ENST00000577393 TDP1Q9NUW8 608 aa28.01■■■□□ 2.07
PPP4R1-204ENST00000577393 RWDD2AQ9UIY3 292 aa28.01■■■□□ 2.07
PPP4R1-204ENST00000577393 CCL26Q9Y258 94 aa28.01■■■□□ 2.07
PPP4R1-204ENST00000577393 SIT1Q9Y3P8 196 aa28.01■■■□□ 2.07
PPP4R1-204ENST00000577393 GALR2O43603 387 aaPredicted RBP28■■■□□ 2.07
PPP4R1-204ENST00000577393 GNA14O95837 355 aa28■■■□□ 2.07
PPP4R1-204ENST00000577393 CD72P21854 359 aa28■■■□□ 2.07
PPP4R1-204ENST00000577393 ZFYVE19Q96K21 471 aa28■■■□□ 2.07
PPP4R1-204ENST00000577393 SLC22A12Q96S37 553 aa28■■■□□ 2.07
PPP4R1-204ENST00000577393 CYP2S1Q96SQ9 504 aa28■■■□□ 2.07
PPP4R1-204ENST00000577393 SMOQ99835 787 aa28■■■□□ 2.07
PPP4R1-204ENST00000577393 NUP62CLQ9H1M0 184 aa28■■■□□ 2.07
PPP4R1-204ENST00000577393 CISHQ9NSE2 258 aa28■■■□□ 2.07
PPP4R1-204ENST00000577393 TRPM5Q9NZQ8 1165 aa28■■■□□ 2.07
PPP4R1-204ENST00000577393 ZNF638Q14966 1978 aaKnown RBP27.99■■■□□ 2.07
PPP4R1-204ENST00000577393 ANAPC1Q9H1A4 1944 aa27.99■■■□□ 2.07
PPP4R1-204ENST00000577393 TRAV19A0A0A6YYK7 116 aa27.99■■■□□ 2.07
PPP4R1-204ENST00000577393 C2orf78A6NCI8 922 aa27.99■■■□□ 2.07
PPP4R1-204ENST00000577393 DCNP07585 359 aaKnown RBP27.99■■■□□ 2.07
PPP4R1-204ENST00000577393 ADORA2BP29275 332 aa27.99■■■□□ 2.07
PPP4R1-204ENST00000577393 TCF15Q12870 199 aa27.99■■■□□ 2.07
PPP4R1-204ENST00000577393 IFRD2Q12894 506 aaPredicted RBP27.99■■■□□ 2.07
PPP4R1-204ENST00000577393 TAF10Q12962 218 aa27.99■■■□□ 2.07
PPP4R1-204ENST00000577393 ARHGAP29Q52LW3 1261 aa27.99■■■□□ 2.07
PPP4R1-204ENST00000577393 ZNF394Q53GI3 561 aa27.99■■■□□ 2.07
PPP4R1-204ENST00000577393 TTC39CQ8N584 583 aa27.99■■■□□ 2.07
PPP4R1-204ENST00000577393 MLKLQ8NB16 471 aa27.99■■■□□ 2.07
PPP4R1-204ENST00000577393 ZMIZ2Q8NF64 920 aa27.99■■■□□ 2.07
PPP4R1-204ENST00000577393 PJA1Q8NG27 643 aa27.99■■■□□ 2.07
PPP4R1-204ENST00000577393 CYFIP2Q96F07 1278 aa27.99■■■□□ 2.07
PPP4R1-204ENST00000577393 HNRNPABQ99729 332 aaKnown RBP27.99■■■□□ 2.07
PPP4R1-204ENST00000577393 GCNT4Q9P109 453 aa27.99■■■□□ 2.07
PPP4R1-204ENST00000577393 ZNF840PA6NDX5 716 aa27.98■■■□□ 2.07
PPP4R1-204ENST00000577393 SHISA7A6NL88 538 aa27.98■■■□□ 2.07
PPP4R1-204ENST00000577393 TNFRSF10BO14763 440 aa27.98■■■□□ 2.07
PPP4R1-204ENST00000577393 PMM2O15305 246 aa27.98■■■□□ 2.07
PPP4R1-204ENST00000577393 BEST1O76090 585 aa27.98■■■□□ 2.07
PPP4R1-204ENST00000577393 RTN3O95197 1032 aaPredicted RBP27.98■■■□□ 2.07
PPP4R1-204ENST00000577393 FGFR1OPO95684 399 aaKnown RBP27.98■■■□□ 2.07
PPP4R1-204ENST00000577393 MARSP56192 900 aaKnown RBP27.98■■■□□ 2.07
PPP4R1-204ENST00000577393 ZNF268Q14587 947 aaPredicted RBP27.98■■■□□ 2.07
PPP4R1-204ENST00000577393 UBXN2BQ14CS0 331 aa27.98■■■□□ 2.07
PPP4R1-204ENST00000577393 TRIM59Q8IWR1 403 aa27.98■■■□□ 2.07
PPP4R1-204ENST00000577393 ARL14EPQ8N8R7 260 aaPredicted RBP27.98■■■□□ 2.07
PPP4R1-204ENST00000577393 SCAMP5Q8TAC9 235 aa27.98■■■□□ 2.07
PPP4R1-204ENST00000577393 CSGALNACT1Q8TDX6 532 aa27.98■■■□□ 2.07
PPP4R1-204ENST00000577393 MED15Q96RN5 788 aa27.98■■■□□ 2.07
PPP4R1-204ENST00000577393 DNAI2Q9GZS0 605 aa27.98■■■□□ 2.07
PPP4R1-204ENST00000577393 KIF9Q9HAQ2 790 aa27.98■■■□□ 2.07
PPP4R1-204ENST00000577393 CSNK1G1Q9HCP0 422 aa27.98■■■□□ 2.07
PPP4R1-204ENST00000577393 LTB4R2Q9NPC1 389 aa27.98■■■□□ 2.07
PPP4R1-204ENST00000577393 THG1LQ9NWX6 298 aaKnown RBP27.98■■■□□ 2.07
PPP4R1-204ENST00000577393 MTF2Q9Y483 593 aaPredicted RBP27.98■■■□□ 2.07
PPP4R1-204ENST00000577393 TICRRQ7Z2Z1 1910 aa27.97■■■□□ 2.07
PPP4R1-204ENST00000577393 CKMP06732 381 aa27.97■■■□□ 2.07
PPP4R1-204ENST00000577393 USP17L7P0C7H9 530 aa27.97■■■□□ 2.07
PPP4R1-204ENST00000577393 FAM200BP0CF97 657 aa27.97■■■□□ 2.07
PPP4R1-204ENST00000577393 YWHAQP27348 245 aa27.97■■■□□ 2.07
PPP4R1-204ENST00000577393 PPP3CCP48454 512 aa27.97■■■□□ 2.07
PPP4R1-204ENST00000577393 SLC5A3P53794 718 aa27.97■■■□□ 2.07
PPP4R1-204ENST00000577393 PTPN5P54829 565 aa27.97■■■□□ 2.07
PPP4R1-204ENST00000577393 MAP3K7CLP57077 242 aa27.97■■■□□ 2.07
PPP4R1-204ENST00000577393 LRMPQ12912 555 aa27.97■■■□□ 2.07
PPP4R1-204ENST00000577393 ZNF852Q6ZMS4 543 aa27.97■■■□□ 2.07
PPP4R1-204ENST00000577393 CCDC105Q8IYK2 499 aa27.97■■■□□ 2.07
PPP4R1-204ENST00000577393 DTWD2Q8NBA8 298 aa27.97■■■□□ 2.07
PPP4R1-204ENST00000577393 FAM122AQ96E09 287 aa27.97■■■□□ 2.07
PPP4R1-204ENST00000577393 SLITRK1Q96PX8 696 aa27.97■■■□□ 2.07
PPP4R1-204ENST00000577393 FAM124BQ9H5Z6 455 aaPredicted RBP27.97■■■□□ 2.07
PPP4R1-204ENST00000577393 PIAS3Q9Y6X2 628 aa27.97■■■□□ 2.07
PPP4R1-204ENST00000577393 F5P12259 2224 aa27.96■■■□□ 2.07
PPP4R1-204ENST00000577393 COL4A2P08572 1712 aa27.96■■■□□ 2.07
PPP4R1-204ENST00000577393 FAM170BA6NMN3 283 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms