RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 LRRC38Q5VT99 294 aa13.12□□□□□ -0.31
TSEN54-204ENST00000577197 KCNT2Q6UVM3 1135 aa13.12□□□□□ -0.31
TSEN54-204ENST00000577197 VSTM1Q6UX27 236 aa13.12□□□□□ -0.31
TSEN54-204ENST00000577197 PAQR9Q6ZVX9 377 aa13.12□□□□□ -0.31
TSEN54-204ENST00000577197 BEND5Q7L4P6 421 aa13.12□□□□□ -0.31
TSEN54-204ENST00000577197 ZNF572Q7Z3I7 529 aaPredicted RBP13.12□□□□□ -0.31
TSEN54-204ENST00000577197 FAM35AQ86V20 835 aa13.12□□□□□ -0.31
TSEN54-204ENST00000577197 PIK3R5Q8WYR1 880 aa13.12□□□□□ -0.31
TSEN54-204ENST00000577197 PCED1BQ96HM7 432 aa13.12□□□□□ -0.31
TSEN54-204ENST00000577197 IGSF21Q96ID5 467 aa13.12□□□□□ -0.31
TSEN54-204ENST00000577197 PBKQ96KB5 322 aa13.12□□□□□ -0.31
TSEN54-204ENST00000577197 TRIM62Q9BVG3 475 aa13.12□□□□□ -0.31
TSEN54-204ENST00000577197 CARD9Q9H257 536 aa13.12□□□□□ -0.31
TSEN54-204ENST00000577197 CHST7Q9NS84 486 aa13.12□□□□□ -0.31
TSEN54-204ENST00000577197 FAM49BQ9NUQ9 324 aa13.12□□□□□ -0.31
TSEN54-204ENST00000577197 CYTH4Q9UIA0 394 aa13.12□□□□□ -0.31
TSEN54-204ENST00000577197 COLQQ9Y215 455 aaPredicted RBP13.12□□□□□ -0.31
TSEN54-204ENST00000577197 PRG3Q9Y2Y8 225 aaPredicted RBP13.12□□□□□ -0.31
TSEN54-204ENST00000577197 PCDHB12Q9Y5F1 795 aa13.12□□□□□ -0.31
TSEN54-204ENST00000577197 VWA8A3KMH1 1905 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 NLRC5Q86WI3 1866 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 LCHNA4D1U4 455 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 LINC01553A4QN01 128 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 CALCAP01258 141 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 CA3P07451 260 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 LINC00271P0C7V0 271 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 KRT3P12035 628 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 DESP17661 470 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 CTNNA2P26232 953 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 TKTP29401 623 aaKnown RBP13.11□□□□□ -0.31
TSEN54-204ENST00000577197 PSMC1P62191 440 aaKnown RBP13.11□□□□□ -0.31
TSEN54-204ENST00000577197 ORC1Q13415 861 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 RPS6KA1Q15418 735 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 MDH1BQ5I0G3 518 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 RAB41Q5JT25 222 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 VARS2Q5ST30 1063 aaKnown RBP13.11□□□□□ -0.31
TSEN54-204ENST00000577197 KIAA0319Q5VV43 1072 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 PMF1Q6P1K2 205 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 CLEC20AQ6ZU45 233 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 SLC26A9Q7LBE3 791 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 SLC39A11Q8N1S5 342 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 UBL4BQ8N7F7 174 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 COLGALT1Q8NBJ5 622 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 IRGQQ8WZA9 623 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 ZNF592Q92610 1267 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 CD101Q93033 1021 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 TTPALQ9BTX7 342 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 SELENOOQ9BVL4 669 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 HERC2P3Q9BVR0 1158 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 PLVAPQ9BX97 442 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 B3GNT5Q9BYG0 378 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 DMAP1Q9NPF5 467 aaPredicted RBP13.11□□□□□ -0.31
TSEN54-204ENST00000577197 CNGB3Q9NQW8 809 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 CACNG4Q9UBN1 327 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 ANAPC7Q9UJX3 599 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 TTC7AQ9ULT0 858 aaPredicted RBP13.11□□□□□ -0.31
TSEN54-204ENST00000577197 SSX2IPQ9Y2D8 614 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 ALG6Q9Y672 507 aa13.11□□□□□ -0.31
TSEN54-204ENST00000577197 COL4A4P53420 1690 aaPredicted RBP13.1□□□□□ -0.31
TSEN54-204ENST00000577197 MYBPHLA2RUH7 354 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 DPYSL4O14531 572 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 PSTPIP1O43586 416 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 C1RP00736 705 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 SOD2P04179 222 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 ATP1A1P05023 1023 aaKnown RBP13.1□□□□□ -0.31
TSEN54-204ENST00000577197 RB1P06400 928 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 CCDC130P13994 396 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 IGFBP6P24592 240 aaPredicted RBP13.1□□□□□ -0.31
TSEN54-204ENST00000577197 CTNNA1P35221 906 aaKnown RBP13.1□□□□□ -0.31
TSEN54-204ENST00000577197 BMPR1AP36894 532 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 SLC6A3Q01959 620 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 CKAP4Q07065 602 aaKnown RBP13.1□□□□□ -0.31
TSEN54-204ENST00000577197 GPR17Q13304 367 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 EFHC1Q5JVL4 640 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 FAM171A1Q5VUB5 890 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 SLC8B1Q6J4K2 584 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 DCUN1D2Q6PH85 259 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 OLFML1Q6UWY5 402 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 POLNQ7Z5Q5 900 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 DDX53Q86TM3 631 aaKnown RBP13.1□□□□□ -0.31
TSEN54-204ENST00000577197 CEP112Q8N8E3 955 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 MNS1Q8NEH6 495 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 OR10T2Q8NGX3 314 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 SPPL2BQ8TCT7 592 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 MYLPFQ96A32 169 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 TMEM169Q96HH4 297 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 TGS1Q96RS0 853 aaKnown RBP13.1□□□□□ -0.31
TSEN54-204ENST00000577197 GPR62Q9BZJ7 368 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 SLC28A3Q9HAS3 691 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.1□□□□□ -0.31
TSEN54-204ENST00000577197 KRT82Q9NSB4 513 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 COMMD8Q9NX08 183 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 SPG21Q9NZD8 308 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 HCSTQ9UBK5 93 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 MTRRQ9UBK8 725 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 TMEM59LQ9UK28 342 aa13.1□□□□□ -0.31
TSEN54-204ENST00000577197 YBX2Q9Y2T7 364 aaKnown RBP13.1□□□□□ -0.31
TSEN54-204ENST00000577197 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.1□□□□□ -0.31
TSEN54-204ENST00000577197 TNRC18O15417 2968 aaPredicted RBP13.1□□□□□ -0.31
TSEN54-204ENST00000577197 E5RJQ4 531 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms