RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 HUS1O60921 280 aa13.08□□□□□ -0.32
PRPF8-208ENST00000573716 PIGRP01833 764 aa13.08□□□□□ -0.32
PRPF8-208ENST00000573716 CYP17A1P05093 508 aa13.08□□□□□ -0.32
PRPF8-208ENST00000573716 MYL7Q01449 175 aa13.08□□□□□ -0.32
PRPF8-208ENST00000573716 RESTQ13127 1097 aa13.08□□□□□ -0.32
PRPF8-208ENST00000573716 INTS6LQ5JSJ4 861 aaKnown RBP13.08□□□□□ -0.32
PRPF8-208ENST00000573716 EOGTQ5NDL2 527 aa13.08□□□□□ -0.32
PRPF8-208ENST00000573716 RAB44Q7Z6P3 723 aaPredicted RBP13.08□□□□□ -0.32
PRPF8-208ENST00000573716 PDCL2Q8N4E4 241 aa13.08□□□□□ -0.32
PRPF8-208ENST00000573716 MINDY1Q8N5J2 469 aa13.08□□□□□ -0.32
PRPF8-208ENST00000573716 PNPLA1Q8N8W4 532 aa13.08□□□□□ -0.32
PRPF8-208ENST00000573716 HNRNPLLQ8WVV9 542 aaKnown RBP13.08□□□□□ -0.32
PRPF8-208ENST00000573716 COL26A1Q96A83 441 aa13.08□□□□□ -0.32
PRPF8-208ENST00000573716 CAMK1GQ96NX5 476 aa13.08□□□□□ -0.32
PRPF8-208ENST00000573716 PNKPQ96T60 521 aa13.08□□□□□ -0.32
PRPF8-208ENST00000573716 CCSER1Q9C0I3 900 aa13.08□□□□□ -0.32
PRPF8-208ENST00000573716 ABCB6Q9NP58 842 aa13.08□□□□□ -0.32
PRPF8-208ENST00000573716 SMPD4Q9NXE4 827 aa13.08□□□□□ -0.32
PRPF8-208ENST00000573716 KCND2Q9NZV8 630 aa13.08□□□□□ -0.32
PRPF8-208ENST00000573716 AGO2Q9UKV8 859 aaKnown RBP13.08□□□□□ -0.32
PRPF8-208ENST00000573716 L1RE1Q9UN81 338 aa13.08□□□□□ -0.32
PRPF8-208ENST00000573716 ARHGAP26Q9UNA1 814 aa13.08□□□□□ -0.32
PRPF8-208ENST00000573716 PCDHB9Q9Y5E1 797 aa13.08□□□□□ -0.32
PRPF8-208ENST00000573716 VWA3AA6NCI4 1184 aa13.07□□□□□ -0.32
PRPF8-208ENST00000573716 UPK3BL1B0FP48 263 aa13.07□□□□□ -0.32
PRPF8-208ENST00000573716 UPK3BL2E5RIL1 263 aa13.07□□□□□ -0.32
PRPF8-208ENST00000573716 AP5Z1O43299 807 aa13.07□□□□□ -0.32
PRPF8-208ENST00000573716 KAT7O95251 611 aa13.07□□□□□ -0.32
PRPF8-208ENST00000573716 ABL1P00519 1130 aa13.07□□□□□ -0.32
PRPF8-208ENST00000573716 SERPINF2P08697 491 aa13.07□□□□□ -0.32
PRPF8-208ENST00000573716 POLR2BP30876 1174 aaKnown RBP13.07□□□□□ -0.32
PRPF8-208ENST00000573716 PRPHP41219 470 aa13.07□□□□□ -0.32
PRPF8-208ENST00000573716 ATP2C1P98194 919 aaPredicted RBP13.07□□□□□ -0.32
PRPF8-208ENST00000573716 TFAMQ00059 246 aaKnown RBP13.07□□□□□ -0.32
PRPF8-208ENST00000573716 MESP2Q0VG99 397 aa13.07□□□□□ -0.32
PRPF8-208ENST00000573716 GAB4Q2WGN9 574 aa13.07□□□□□ -0.32
PRPF8-208ENST00000573716 MAP7D1Q3KQU3 841 aa13.07□□□□□ -0.32
PRPF8-208ENST00000573716 CEP76Q8TAP6 659 aa13.07□□□□□ -0.32
PRPF8-208ENST00000573716 LEO1Q8WVC0 666 aaPredicted RBP13.07□□□□□ -0.32
PRPF8-208ENST00000573716 ERLEC1Q96DZ1 483 aa13.07□□□□□ -0.32
PRPF8-208ENST00000573716 MYRFLQ96LU7 910 aa13.07□□□□□ -0.32
PRPF8-208ENST00000573716 CCDC86Q9H6F5 360 aaKnown RBP13.07□□□□□ -0.32
PRPF8-208ENST00000573716 PARVGQ9HBI0 331 aa13.07□□□□□ -0.32
PRPF8-208ENST00000573716 ARHGEF4Q9NR80 690 aa13.07□□□□□ -0.32
PRPF8-208ENST00000573716 ODF2LQ9ULJ1 636 aa13.07□□□□□ -0.32
PRPF8-208ENST00000573716 AGAP1Q9UPQ3 857 aa13.07□□□□□ -0.32
PRPF8-208ENST00000573716 MYO18AQ92614 2054 aaKnown RBP13.06□□□□□ -0.32
PRPF8-208ENST00000573716 HCRTO43612 131 aa13.06□□□□□ -0.32
PRPF8-208ENST00000573716 SH3BP5O60239 455 aa13.06□□□□□ -0.32
PRPF8-208ENST00000573716 TRAK2O60296 914 aa13.06□□□□□ -0.32
PRPF8-208ENST00000573716 TBCAO75347 108 aaKnown RBP13.06□□□□□ -0.32
PRPF8-208ENST00000573716 ITGB3P05106 788 aa13.06□□□□□ -0.32
PRPF8-208ENST00000573716 CD59P13987 128 aa13.06□□□□□ -0.32
PRPF8-208ENST00000573716 HOXD12P35452 270 aa13.06□□□□□ -0.32
PRPF8-208ENST00000573716 PNPLA4P41247 253 aa13.06□□□□□ -0.32
PRPF8-208ENST00000573716 VASPP50552 380 aaPredicted RBP13.06□□□□□ -0.32
PRPF8-208ENST00000573716 PDE6CP51160 858 aa13.06□□□□□ -0.32
PRPF8-208ENST00000573716 DHCR24Q15392 516 aa13.06□□□□□ -0.32
PRPF8-208ENST00000573716 TRIP6Q15654 476 aaKnown RBP13.06□□□□□ -0.32
PRPF8-208ENST00000573716 HYIQ5T013 277 aa13.06□□□□□ -0.32
PRPF8-208ENST00000573716 MDM1Q8TC05 714 aa13.06□□□□□ -0.32
PRPF8-208ENST00000573716 NOC3LQ8WTT2 800 aaKnown RBP13.06□□□□□ -0.32
PRPF8-208ENST00000573716 POMGNT1Q8WZA1 660 aa13.06□□□□□ -0.32
PRPF8-208ENST00000573716 LRIG1Q96JA1 1093 aa13.06□□□□□ -0.32
PRPF8-208ENST00000573716 ACBD6Q9BR61 282 aa13.06□□□□□ -0.32
PRPF8-208ENST00000573716 TRPM5Q9NZQ8 1165 aa13.06□□□□□ -0.32
PRPF8-208ENST00000573716 PCDH15Q96QU1 1955 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 FAM221BA6H8Z2 402 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 ARHGAP33O14559 1287 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 ADAM23O75077 832 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 IL18RAPO95256 599 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 ADH1CP00326 375 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 KRT19P08727 400 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 FTH1P19P0C7X4 201 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 WASP42768 502 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 ZXDBP98169 803 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 ZNF33AQ06730 810 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 HNRNPDQ14103 355 aaKnown RBP13.05□□□□□ -0.32
PRPF8-208ENST00000573716 TMEM119Q4V9L6 283 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 SPDYCQ5MJ68 293 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 MCTP1Q6DN14 999 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 SLFN12LQ6IEE8 588 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 SLC36A4Q6YBV0 504 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 RABEPKQ7Z6M1 372 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 OSTM1Q86WC4 334 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 C12orf40Q86WS4 652 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 ADGRF2Q8IZF7 708 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 RGL4Q8IZJ4 473 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 RASSF8Q8NHQ8 419 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 FAM84AQ96KN4 292 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 LLPHQ9BRT6 129 aaKnown RBP13.05□□□□□ -0.32
PRPF8-208ENST00000573716 IKZF4Q9H2S9 585 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 CAPN10Q9HC96 672 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.05□□□□□ -0.32
PRPF8-208ENST00000573716 CFAP97Q9P2B7 532 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 LIMCH1Q9UPQ0 1083 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 RAXQ9Y2V3 346 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 SNX9Q9Y5X1 595 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 CPQQ9Y646 472 aa13.05□□□□□ -0.32
PRPF8-208ENST00000573716 ACACAQ13085 2346 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms