RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 MRPS17Q9Y2R5 130 aaKnown RBP18.45■□□□□ 0.54
SMG6-212ENST00000573153 OTOGLQ3ZCN5 2332 aa18.45■□□□□ 0.54
SMG6-212ENST00000573153 RIF1Q5UIP0 2472 aaKnown RBP18.45■□□□□ 0.54
SMG6-212ENST00000573153 FAM186AA6NE01 2351 aa18.45■□□□□ 0.54
SMG6-212ENST00000573153 TNFRSF10BO14763 440 aa18.44■□□□□ 0.54
SMG6-212ENST00000573153 PMS1P54277 932 aaKnown RBP18.44■□□□□ 0.54
SMG6-212ENST00000573153 PLCB2Q00722 1185 aa18.44■□□□□ 0.54
SMG6-212ENST00000573153 CYP27A1Q02318 531 aa18.44■□□□□ 0.54
SMG6-212ENST00000573153 BIRC3Q13489 604 aa18.44■□□□□ 0.54
SMG6-212ENST00000573153 CCINQ13939 588 aa18.44■□□□□ 0.54
SMG6-212ENST00000573153 TAF12Q16514 161 aa18.44■□□□□ 0.54
SMG6-212ENST00000573153 EDRF1Q3B7T1 1238 aa18.44■□□□□ 0.54
SMG6-212ENST00000573153 ZNF667Q5HYK9 610 aa18.44■□□□□ 0.54
SMG6-212ENST00000573153 CEP135Q66GS9 1140 aa18.44■□□□□ 0.54
SMG6-212ENST00000573153 NAIF1Q69YI7 327 aaPredicted RBP18.44■□□□□ 0.54
SMG6-212ENST00000573153 TSSK4Q6SA08 328 aa18.44■□□□□ 0.54
SMG6-212ENST00000573153 SCARA5Q6ZMJ2 495 aa18.44■□□□□ 0.54
SMG6-212ENST00000573153 Q6ZS52 159 aa18.44■□□□□ 0.54
SMG6-212ENST00000573153 DENND5BQ6ZUT9 1274 aa18.44■□□□□ 0.54
SMG6-212ENST00000573153 FAM35AQ86V20 835 aa18.44■□□□□ 0.54
SMG6-212ENST00000573153 RALGPS2Q86X27 583 aaPredicted RBP18.44■□□□□ 0.54
SMG6-212ENST00000573153 YAF2Q8IY57 180 aa18.44■□□□□ 0.54
SMG6-212ENST00000573153 SUMF1Q8NBK3 374 aa18.44■□□□□ 0.54
SMG6-212ENST00000573153 TAS1R2Q8TE23 839 aa18.44■□□□□ 0.54
SMG6-212ENST00000573153 ERCC4Q92889 916 aaPredicted RBP18.44■□□□□ 0.54
SMG6-212ENST00000573153 TWNKQ96RR1 684 aa18.44■□□□□ 0.54
SMG6-212ENST00000573153 GTPBP4Q9BZE4 634 aaKnown RBP18.44■□□□□ 0.54
SMG6-212ENST00000573153 SNX25Q9H3E2 840 aa18.44■□□□□ 0.54
SMG6-212ENST00000573153 KIF9Q9HAQ2 790 aa18.44■□□□□ 0.54
SMG6-212ENST00000573153 LMAN1LQ9HAT1 526 aa18.44■□□□□ 0.54
SMG6-212ENST00000573153 GKN1Q9NS71 199 aa18.44■□□□□ 0.54
SMG6-212ENST00000573153 RMND1Q9NWS8 449 aa18.44■□□□□ 0.54
SMG6-212ENST00000573153 IL37Q9NZH6 218 aa18.44■□□□□ 0.54
SMG6-212ENST00000573153 A8MXQ7 604 aa18.43■□□□□ 0.54
SMG6-212ENST00000573153 DPYSL4O14531 572 aa18.43■□□□□ 0.54
SMG6-212ENST00000573153 HLA-DRAP01903 254 aa18.43■□□□□ 0.54
SMG6-212ENST00000573153 ARSAP15289 507 aa18.43■□□□□ 0.54
SMG6-212ENST00000573153 RPL13P26373 211 aaKnown RBP18.43■□□□□ 0.54
SMG6-212ENST00000573153 AVPR1AP37288 418 aa18.43■□□□□ 0.54
SMG6-212ENST00000573153 VAMP7P51809 220 aa18.43■□□□□ 0.54
SMG6-212ENST00000573153 FUKQ8N0W3 1084 aa18.43■□□□□ 0.54
SMG6-212ENST00000573153 ARL14EPQ8N8R7 260 aaPredicted RBP18.43■□□□□ 0.54
SMG6-212ENST00000573153 EZH1Q92800 747 aaPredicted RBP18.43■□□□□ 0.54
SMG6-212ENST00000573153 ELOVL4Q9GZR5 314 aa18.43■□□□□ 0.54
SMG6-212ENST00000573153 DCHS1Q96JQ0 3298 aa18.43■□□□□ 0.54
SMG6-212ENST00000573153 FAM92AA1XBS5 289 aa18.42■□□□□ 0.54
SMG6-212ENST00000573153 ZNF840PA6NDX5 716 aa18.42■□□□□ 0.54
SMG6-212ENST00000573153 TRIM66O15016 1216 aa18.42■□□□□ 0.54
SMG6-212ENST00000573153 LAMTOR5O43504 91 aa18.42■□□□□ 0.54
SMG6-212ENST00000573153 PHACTR2O75167 634 aa18.42■□□□□ 0.54
SMG6-212ENST00000573153 OAS1P00973 400 aaKnown RBP18.42■□□□□ 0.54
SMG6-212ENST00000573153 GRIK1P39086 918 aa18.42■□□□□ 0.54
SMG6-212ENST00000573153 PRCPP42785 496 aa18.42■□□□□ 0.54
SMG6-212ENST00000573153 GCLMP48507 274 aa18.42■□□□□ 0.54
SMG6-212ENST00000573153 INCA1Q0VD86 236 aa18.42■□□□□ 0.54
SMG6-212ENST00000573153 MTF1Q14872 753 aa18.42■□□□□ 0.54
SMG6-212ENST00000573153 GAB4Q2WGN9 574 aa18.42■□□□□ 0.54
SMG6-212ENST00000573153 PKN3Q6P5Z2 889 aa18.42■□□□□ 0.54
SMG6-212ENST00000573153 INTS8Q75QN2 995 aaKnown RBP18.42■□□□□ 0.54
SMG6-212ENST00000573153 CRYBG2Q8N1P7 616 aa18.42■□□□□ 0.54
SMG6-212ENST00000573153 CSGALNACT1Q8TDX6 532 aa18.42■□□□□ 0.54
SMG6-212ENST00000573153 WHAMMQ8TF30 809 aa18.42■□□□□ 0.54
SMG6-212ENST00000573153 TAF4BQ92750 862 aa18.42■□□□□ 0.54
SMG6-212ENST00000573153 KCNK16Q96T55 309 aa18.42■□□□□ 0.54
SMG6-212ENST00000573153 IER2Q9BTL4 223 aa18.42■□□□□ 0.54
SMG6-212ENST00000573153 RNF38Q9H0F5 515 aa18.42■□□□□ 0.54
SMG6-212ENST00000573153 EBF3Q9H4W6 596 aa18.42■□□□□ 0.54
SMG6-212ENST00000573153 FBRSL1Q9HCM7 1045 aaKnown RBP18.42■□□□□ 0.54
SMG6-212ENST00000573153 ARHGAP26Q9UNA1 814 aa18.42■□□□□ 0.54
SMG6-212ENST00000573153 FRYLO94915 3013 aa18.42■□□□□ 0.54
SMG6-212ENST00000573153 ZNF292O60281 2723 aa18.42■□□□□ 0.54
SMG6-212ENST00000573153 KIAA1549LQ6ZVL6 1849 aa18.42■□□□□ 0.54
SMG6-212ENST00000573153 K7ESF4 209 aa18.41■□□□□ 0.54
SMG6-212ENST00000573153 NCAM2O15394 837 aa18.41■□□□□ 0.54
SMG6-212ENST00000573153 BEST1O76090 585 aa18.41■□□□□ 0.54
SMG6-212ENST00000573153 PGFP49763 221 aa18.41■□□□□ 0.54
SMG6-212ENST00000573153 SATB1Q01826 763 aa18.41■□□□□ 0.54
SMG6-212ENST00000573153 CSTF1Q05048 431 aaKnown RBP18.41■□□□□ 0.54
SMG6-212ENST00000573153 ORC1Q13415 861 aa18.41■□□□□ 0.54
SMG6-212ENST00000573153 RUNX3Q13761 415 aa18.41■□□□□ 0.54
SMG6-212ENST00000573153 PON2Q15165 354 aa18.41■□□□□ 0.54
SMG6-212ENST00000573153 SGSM1Q2NKQ1 1148 aa18.41■□□□□ 0.54
SMG6-212ENST00000573153 ITPRIPL2Q3MIP1 535 aa18.41■□□□□ 0.54
SMG6-212ENST00000573153 TMEM196Q5HYL7 178 aa18.41■□□□□ 0.54
SMG6-212ENST00000573153 ZNF658Q5TYW1 1059 aaPredicted RBP18.41■□□□□ 0.54
SMG6-212ENST00000573153 FSTL4Q6MZW2 842 aa18.41■□□□□ 0.54
SMG6-212ENST00000573153 FAM186BQ8IYM0 893 aa18.41■□□□□ 0.54
SMG6-212ENST00000573153 SEMA4DQ92854 862 aa18.41■□□□□ 0.54
SMG6-212ENST00000573153 EEF2KMTQ96G04 330 aa18.41■□□□□ 0.54
SMG6-212ENST00000573153 SMOQ99835 787 aa18.41■□□□□ 0.54
SMG6-212ENST00000573153 SEMA4AQ9H3S1 761 aa18.41■□□□□ 0.54
SMG6-212ENST00000573153 CSNK1G1Q9HCP0 422 aa18.41■□□□□ 0.54
SMG6-212ENST00000573153 TRPC7Q9HCX4 862 aa18.41■□□□□ 0.54
SMG6-212ENST00000573153 PCDHA5Q9Y5H7 936 aa18.41■□□□□ 0.54
SMG6-212ENST00000573153 PAPSS2O95340 614 aaPredicted RBP18.4■□□□□ 0.54
SMG6-212ENST00000573153 SMC2O95347 1197 aa18.4■□□□□ 0.54
SMG6-212ENST00000573153 CHRM1P11229 460 aaPredicted RBP18.4■□□□□ 0.54
SMG6-212ENST00000573153 CCDC130P13994 396 aa18.4■□□□□ 0.54
SMG6-212ENST00000573153 PSMC2P35998 433 aaKnown RBP18.4■□□□□ 0.54
SMG6-212ENST00000573153 KPNA1P52294 538 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms