RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 SIMC1Q8NDZ2 872 aa5.04□□□□□ -1.6
NUP88-202ENST00000570937 PLBD2Q8NHP8 589 aa5.04□□□□□ -1.6
NUP88-202ENST00000570937 SLC30A5Q8TAD4 765 aa5.04□□□□□ -1.6
NUP88-202ENST00000570937 LPIN2Q92539 896 aa5.04□□□□□ -1.6
NUP88-202ENST00000570937 PGBD1Q96JS3 809 aa5.04□□□□□ -1.6
NUP88-202ENST00000570937 RSAD1Q9HA92 442 aa5.04□□□□□ -1.6
NUP88-202ENST00000570937 ANLNQ9NQW6 1124 aa5.04□□□□□ -1.6
NUP88-202ENST00000570937 MRPS18AQ9NVS2 196 aaKnown RBP5.04□□□□□ -1.6
NUP88-202ENST00000570937 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.04□□□□□ -1.6
NUP88-202ENST00000570937 USP6P35125 1406 aa5.04□□□□□ -1.6
NUP88-202ENST00000570937 TTC21BQ7Z4L5 1316 aa5.03□□□□□ -1.6
NUP88-202ENST00000570937 KIAA0355O15063 1070 aa5.03□□□□□ -1.6
NUP88-202ENST00000570937 YY2O15391 372 aa5.03□□□□□ -1.6
NUP88-202ENST00000570937 UBXN7O94888 489 aa5.03□□□□□ -1.6
NUP88-202ENST00000570937 KIF20AO95235 890 aa5.03□□□□□ -1.6
NUP88-202ENST00000570937 NANOS3P60323 173 aaKnown RBP5.03□□□□□ -1.6
NUP88-202ENST00000570937 RAB1AP62820 205 aa5.03□□□□□ -1.6
NUP88-202ENST00000570937 MRPS35P82673 323 aaKnown RBP5.03□□□□□ -1.6
NUP88-202ENST00000570937 EXOSC9Q06265 439 aaKnown RBP5.03□□□□□ -1.6
NUP88-202ENST00000570937 FAM102BQ5T8I3 360 aa5.03□□□□□ -1.6
NUP88-202ENST00000570937 FAM160B1Q5W0V3 765 aa5.03□□□□□ -1.6
NUP88-202ENST00000570937 NXNQ6DKJ4 435 aa5.03□□□□□ -1.6
NUP88-202ENST00000570937 TAF2Q6P1X5 1199 aa5.03□□□□□ -1.6
NUP88-202ENST00000570937 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.03□□□□□ -1.6
NUP88-202ENST00000570937 CAMKK1Q8N5S9 505 aa5.03□□□□□ -1.6
NUP88-202ENST00000570937 CAGE1Q8TC20 777 aa5.03□□□□□ -1.6
NUP88-202ENST00000570937 ACTRT2Q8TDY3 377 aa5.03□□□□□ -1.6
NUP88-202ENST00000570937 COG3Q96JB2 828 aa5.03□□□□□ -1.6
NUP88-202ENST00000570937 ACO2Q99798 780 aaKnown RBP5.03□□□□□ -1.6
NUP88-202ENST00000570937 HEPHQ9BQS7 1158 aa5.03□□□□□ -1.6
NUP88-202ENST00000570937 LRFN3Q9BTN0 628 aa5.03□□□□□ -1.6
NUP88-202ENST00000570937 SARS2Q9NP81 518 aaKnown RBP5.03□□□□□ -1.6
NUP88-202ENST00000570937 LRIT1Q9P2V4 623 aa5.03□□□□□ -1.6
NUP88-202ENST00000570937 ZNHIT2Q9UHR6 403 aa5.03□□□□□ -1.6
NUP88-202ENST00000570937 CPSF1Q10570 1443 aaKnown RBP5.03□□□□□ -1.6
NUP88-202ENST00000570937 COL11A2P13942 1736 aaPredicted RBP5.03□□□□□ -1.6
NUP88-202ENST00000570937 KIAA0232Q92628 1395 aa5.03□□□□□ -1.6
NUP88-202ENST00000570937 USP19O94966 1318 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 BCL9LQ86UU0 1499 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 CDK12Q9NYV4 1490 aaPredicted RBP5.02□□□□□ -1.61
NUP88-202ENST00000570937 A0A0B4J269 797 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 CCDC151A5D8V7 595 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 TRIAP1O43715 76 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 DNAJB5O75953 348 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 NUDT3O95989 172 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 PIM1P11309 404 aaPredicted RBP5.02□□□□□ -1.61
NUP88-202ENST00000570937 PPP3CBP16298 524 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 HDCP19113 662 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 HTR1BP28222 390 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 PLA2G5P39877 138 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 NDUFV1P49821 464 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 AGFG1P52594 562 aaKnown RBP5.02□□□□□ -1.61
NUP88-202ENST00000570937 SOX8P57073 446 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 NXPH1P58417 271 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 ITIH3Q06033 890 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 TUBB3Q13509 450 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 FGL2Q14314 439 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 KHDC1LQ5JSQ8 128 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 SLC30A10Q6XR72 485 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 DNAJC10Q8IXB1 793 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 TCEAL8Q8IYN2 117 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 CHPFQ8IZ52 775 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 FAM109AQ8N4B1 249 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 MYCBPAPQ8TBZ2 947 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 RUNDC1Q96C34 613 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 MRGPRX1Q96LB2 322 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 POLR3GLQ9BT43 218 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 PRDM13Q9H4Q3 707 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 RIOX1Q9H6W3 641 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 PCDHA6Q9UN73 950 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 MED16Q9Y2X0 877 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 INSL6Q9Y581 213 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 EDC4Q6P2E9 1401 aaKnown RBP5.02□□□□□ -1.61
NUP88-202ENST00000570937 CPDO75976 1380 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 TOPAZ1Q8N9V7 1692 aa5.02□□□□□ -1.61
NUP88-202ENST00000570937 TRPM3Q9HCF6 1732 aaPredicted RBP5.01□□□□□ -1.61
NUP88-202ENST00000570937 ATRNO75882 1429 aa5.01□□□□□ -1.61
NUP88-202ENST00000570937 SSH2Q76I76 1423 aa5.01□□□□□ -1.61
NUP88-202ENST00000570937 WDR27A2RRH5 827 aa5.01□□□□□ -1.61
NUP88-202ENST00000570937 F5H697 171 aa5.01□□□□□ -1.61
NUP88-202ENST00000570937 M0QYG6 137 aa5.01□□□□□ -1.61
NUP88-202ENST00000570937 TUSC2O75896 110 aa5.01□□□□□ -1.61
NUP88-202ENST00000570937 SCGB1D2O95969 90 aa5.01□□□□□ -1.61
NUP88-202ENST00000570937 HSPA5P11021 654 aaKnown RBP5.01□□□□□ -1.61
NUP88-202ENST00000570937 ITGALP20701 1170 aa5.01□□□□□ -1.61
NUP88-202ENST00000570937 GCLCP48506 637 aaPredicted RBP5.01□□□□□ -1.61
NUP88-202ENST00000570937 PPP2R5AQ15172 486 aa5.01□□□□□ -1.61
NUP88-202ENST00000570937 STRIP1Q5VSL9 837 aa5.01□□□□□ -1.61
NUP88-202ENST00000570937 FAM98AQ8NCA5 519 aaKnown RBP5.01□□□□□ -1.61
NUP88-202ENST00000570937 LRGUKQ96M69 825 aa5.01□□□□□ -1.61
NUP88-202ENST00000570937 DUSP26Q9BV47 211 aa5.01□□□□□ -1.61
NUP88-202ENST00000570937 AMBRA1Q9C0C7 1298 aa5.01□□□□□ -1.61
NUP88-202ENST00000570937 SMOC2Q9H3U7 446 aa5.01□□□□□ -1.61
NUP88-202ENST00000570937 HESX1Q9UBX0 185 aa5.01□□□□□ -1.61
NUP88-202ENST00000570937 TLK1Q9UKI8 766 aa5.01□□□□□ -1.61
NUP88-202ENST00000570937 PLEKHM1Q9Y4G2 1056 aa5.01□□□□□ -1.61
NUP88-202ENST00000570937 RAD54BQ9Y620 910 aa5.01□□□□□ -1.61
NUP88-202ENST00000570937 SLIT2O94813 1529 aa5.01□□□□□ -1.61
NUP88-202ENST00000570937 A0A1W2PP64 1363 aa5.01□□□□□ -1.61
NUP88-202ENST00000570937 ANKRD36BQ8N2N9 1353 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms