RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 MYO1AQ9UBC5 1043 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 CNOT8Q9UFF9 292 aaKnown RBP16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 STRIP2Q9ULQ0 834 aa16.28■□□□□ 0.2
HERPUD1-219ENST00000570273 SZT2Q5T011 3432 aa16.27■□□□□ 0.2
HERPUD1-219ENST00000570273 GBF1Q92538 1859 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 WDR27A2RRH5 827 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 BEST1O76090 585 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 CXCL14O95715 111 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 ERBB2P04626 1255 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 RRM1P23921 792 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 CYP2F1P24903 491 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 NDUFV1P49821 464 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 SNX16P57768 344 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 PTP4A2Q12974 167 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 GPM6BQ13491 265 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 SMC1AQ14683 1233 aaKnown RBP16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 HABP4Q5JVS0 413 aaKnown RBP16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 PHLDB2Q86SQ0 1253 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 PIGZQ86VD9 579 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 SCN4BQ8IWT1 228 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 ATAD1Q8NBU5 361 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 SPPL2BQ8TCT7 592 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 STK32AQ8WU08 396 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 C2orf15Q8WU43 125 aaKnown RBP16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 RFFLQ8WZ73 363 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 VCPIP1Q96JH7 1222 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 SLC4A5Q9BY07 1137 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 MIS12Q9H081 205 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 CERS4Q9HA82 394 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 RXFP1Q9HBX9 757 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 TMEM30AQ9NV96 361 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 FNIP2Q9P278 1114 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 TJP2Q9UDY2 1190 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 GUCA1BQ9UMX6 200 aa16.27■□□□□ 0.19
HERPUD1-219ENST00000570273 MACROD2A1Z1Q3 448 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 ESPNB1AK53 854 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 E5RJQ4 531 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 F8VP50 259 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 PIK3R2O00459 728 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 GRM6O15303 877 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 LPXNO60711 386 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 LILRB3O75022 631 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 CYP1A2P05177 515 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 DNAJB1P25685 340 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 GRIK1P39086 918 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 MAGEA11P43364 429 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 ACADSBP45954 432 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 ERVFC1P60507 584 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 LRIT3Q3SXY7 679 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 LLGL2Q6P1M3 1020 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 DNAJC24Q6P3W2 148 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 VSTM1Q6UX27 236 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 ZNF662Q6ZS27 426 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 ZMIZ2Q8NF64 920 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 C18orf8Q96DM3 657 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 HSFY1Q96LI6 401 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 SEPT5Q99719 369 aaPredicted RBP16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 SLC28A3Q9HAS3 691 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 LRRC4Q9HBW1 653 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 CSNK1G1Q9HCP0 422 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 CYLDQ9NQC7 956 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 AVENQ9NQS1 362 aaPredicted RBP16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 CTTNBP2NLQ9P2B4 639 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 AFF4Q9UHB7 1163 aaKnown RBP16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 CHORDC1Q9UHD1 332 aaPredicted RBP16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 PLXNA4Q9HCM2 1894 aa16.26■□□□□ 0.19
HERPUD1-219ENST00000570273 CHD9Q3L8U1 2897 aa16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 A0A0A6YYK5 440 aaPredicted RBP16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 BTNL10A8MVZ5 291 aa16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 H3BNC9 293 aa16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 GOLGA8SH3BPF8 625 aa16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 TRIM66O15016 1216 aa16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 TEX28O15482 410 aa16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 VNN2O95498 520 aa16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 LCP1P13796 627 aa16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 NAP1L1P55209 391 aaKnown RBP16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 ADCY1Q08828 1119 aa16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 RAB33AQ14088 237 aa16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 TPGS2Q68CL5 300 aa16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 OR6B2Q6IFH4 312 aa16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 XYLT1Q86Y38 959 aa16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 RHOT2Q8IXI1 618 aa16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 SIX6OS1Q8N1H7 587 aa16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 TTC9BQ8N6N2 239 aa16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 MICAL1Q8TDZ2 1067 aa16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 ARNTL2Q8WYA1 636 aa16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 KCTD13Q8WZ19 329 aa16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 KCNK16Q96T55 309 aa16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 EMILIN2Q9BXX0 1053 aa16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 NGRNQ9NPE2 291 aaKnown RBP16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 WDR35Q9P2L0 1181 aa16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 SCINQ9Y6U3 715 aa16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 DUSP10Q9Y6W6 482 aa16.25■□□□□ 0.19
HERPUD1-219ENST00000570273 FSCN2O14926 492 aa16.24■□□□□ 0.19
HERPUD1-219ENST00000570273 BUB1O43683 1085 aa16.24■□□□□ 0.19
HERPUD1-219ENST00000570273 ABL1P00519 1130 aa16.24■□□□□ 0.19
HERPUD1-219ENST00000570273 ADH1AP07327 375 aa16.24■□□□□ 0.19
HERPUD1-219ENST00000570273 CNPP09543 421 aaKnown RBP16.24■□□□□ 0.19
HERPUD1-219ENST00000570273 HAPLN1P10915 354 aaPredicted RBP16.24■□□□□ 0.19
HERPUD1-219ENST00000570273 NOP2P46087 812 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms