RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 HOXD13P35453 343 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 GNL1P36915 607 aaPredicted RBP14.01□□□□□ -0.17
SPG7-221ENST00000569720 PPP3CCP48454 512 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 CYP2J2P51589 502 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 TNNC1P63316 161 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 TRPC3Q13507 836 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 PSMD6Q15008 389 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 PKN3Q6P5Z2 889 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 UNC13DQ70J99 1090 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 OR6B3Q8NGW1 331 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 MYCBPAPQ8TBZ2 947 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 SH3RF2Q8TEC5 729 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 ACDQ96AP0 544 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 CHFRQ96EP1 664 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 LOXL4Q96JB6 756 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 SLC22A12Q96S37 553 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 CGRRF1Q99675 332 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 CRTAC1Q9NQ79 661 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 FAM13BQ9NYF5 915 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 GCNT4Q9P109 453 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 CFAP45Q9UL16 551 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 WNT6Q9Y6F9 365 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 EML5Q05BV3 1969 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 SDK1Q7Z5N4 2213 aa14□□□□□ -0.17
SPG7-221ENST00000569720 KIAA1549LQ6ZVL6 1849 aa14□□□□□ -0.17
SPG7-221ENST00000569720 SLC30A4O14863 429 aa14□□□□□ -0.17
SPG7-221ENST00000569720 CLIC2O15247 247 aa14□□□□□ -0.17
SPG7-221ENST00000569720 POLR2DO15514 142 aaKnown RBP14□□□□□ -0.17
SPG7-221ENST00000569720 TGFB1I1O43294 461 aa14□□□□□ -0.17
SPG7-221ENST00000569720 AKAP3O75969 853 aa14□□□□□ -0.17
SPG7-221ENST00000569720 PXNP49023 591 aaPredicted RBP14□□□□□ -0.17
SPG7-221ENST00000569720 CYP24A1Q07973 514 aa14□□□□□ -0.17
SPG7-221ENST00000569720 PSMD2Q13200 908 aa14□□□□□ -0.17
SPG7-221ENST00000569720 EML3Q32P44 896 aa14□□□□□ -0.17
SPG7-221ENST00000569720 WDR72Q3MJ13 1102 aa14□□□□□ -0.17
SPG7-221ENST00000569720 MDH1BQ5I0G3 518 aa14□□□□□ -0.17
SPG7-221ENST00000569720 SHC4Q6S5L8 630 aa14□□□□□ -0.17
SPG7-221ENST00000569720 NELFCDQ8IXH7 590 aa14□□□□□ -0.17
SPG7-221ENST00000569720 CCDC127Q96BQ5 260 aa14□□□□□ -0.17
SPG7-221ENST00000569720 PCED1BQ96HM7 432 aa14□□□□□ -0.17
SPG7-221ENST00000569720 FBRSL1Q9HCM7 1045 aaKnown RBP14□□□□□ -0.17
SPG7-221ENST00000569720 ARHGAP26Q9UNA1 814 aa14□□□□□ -0.17
SPG7-221ENST00000569720 AXIN1O15169 862 aa13.99□□□□□ -0.17
SPG7-221ENST00000569720 PHACTR2O75167 634 aa13.99□□□□□ -0.17
SPG7-221ENST00000569720 CLSTN1O94985 981 aa13.99□□□□□ -0.17
SPG7-221ENST00000569720 CST3P01034 146 aaPredicted RBP13.99□□□□□ -0.17
SPG7-221ENST00000569720 PTPN1P18031 435 aaKnown RBP13.99□□□□□ -0.17
SPG7-221ENST00000569720 ATICP31939 592 aa13.99□□□□□ -0.17
SPG7-221ENST00000569720 ME1P48163 572 aa13.99□□□□□ -0.17
SPG7-221ENST00000569720 NOP14P78316 857 aaKnown RBP13.99□□□□□ -0.17
SPG7-221ENST00000569720 AASDHQ4L235 1098 aaPredicted RBP13.99□□□□□ -0.17
SPG7-221ENST00000569720 FOXD4L5Q5VV16 416 aaPredicted RBP13.99□□□□□ -0.17
SPG7-221ENST00000569720 TDRD10Q5VZ19 366 aaKnown RBP13.99□□□□□ -0.17
SPG7-221ENST00000569720 SYT13Q7L8C5 426 aa13.99□□□□□ -0.17
SPG7-221ENST00000569720 C12orf50Q8NA57 414 aaPredicted RBP13.99□□□□□ -0.17
SPG7-221ENST00000569720 RPLP0P6Q8NHW5 317 aa13.99□□□□□ -0.17
SPG7-221ENST00000569720 SCFD1Q8WVM8 642 aa13.99□□□□□ -0.17
SPG7-221ENST00000569720 FOXD4L4Q8WXT5 416 aaPredicted RBP13.99□□□□□ -0.17
SPG7-221ENST00000569720 SYAP1Q96A49 352 aaPredicted RBP13.99□□□□□ -0.17
SPG7-221ENST00000569720 C8orf48Q96LL4 319 aa13.99□□□□□ -0.17
SPG7-221ENST00000569720 MRPL45Q9BRJ2 306 aaKnown RBP13.99□□□□□ -0.17
SPG7-221ENST00000569720 TTLL2Q9BWV7 592 aa13.99□□□□□ -0.17
SPG7-221ENST00000569720 ELOVL4Q9GZR5 314 aa13.99□□□□□ -0.17
SPG7-221ENST00000569720 ARRDC1-AS1Q9H2J1 176 aa13.99□□□□□ -0.17
SPG7-221ENST00000569720 ATP8B3O60423 1300 aa13.98□□□□□ -0.17
SPG7-221ENST00000569720 PVALEFA0A1B0GWK0 134 aa13.98□□□□□ -0.17
SPG7-221ENST00000569720 A8MXQ7 604 aa13.98□□□□□ -0.17
SPG7-221ENST00000569720 F8VP50 259 aa13.98□□□□□ -0.17
SPG7-221ENST00000569720 EXOC3O60645 756 aa13.98□□□□□ -0.17
SPG7-221ENST00000569720 EPN2O95208 641 aa13.98□□□□□ -0.17
SPG7-221ENST00000569720 STAU1O95793 577 aaKnown RBP13.98□□□□□ -0.17
SPG7-221ENST00000569720 ABL1P00519 1130 aa13.98□□□□□ -0.17
SPG7-221ENST00000569720 HOXC13P31276 330 aa13.98□□□□□ -0.17
SPG7-221ENST00000569720 USP46P62068 366 aa13.98□□□□□ -0.17
SPG7-221ENST00000569720 BMT2Q1RMZ1 405 aa13.98□□□□□ -0.17
SPG7-221ENST00000569720 FOXD4L6Q3SYB3 417 aaPredicted RBP13.98□□□□□ -0.17
SPG7-221ENST00000569720 FOXD4L3Q6VB84 417 aaPredicted RBP13.98□□□□□ -0.17
SPG7-221ENST00000569720 CLEC17AQ6ZS10 378 aa13.98□□□□□ -0.17
SPG7-221ENST00000569720 CEP57L1Q8IYX8 460 aa13.98□□□□□ -0.17
SPG7-221ENST00000569720 KIAA1958Q8N8K9 716 aa13.98□□□□□ -0.17
SPG7-221ENST00000569720 GOLGA5Q8TBA6 731 aa13.98□□□□□ -0.17
SPG7-221ENST00000569720 DDX1Q92499 740 aaKnown RBP13.98□□□□□ -0.17
SPG7-221ENST00000569720 SLITRK1Q96PX8 696 aa13.98□□□□□ -0.17
SPG7-221ENST00000569720 HHIPQ96QV1 700 aa13.98□□□□□ -0.17
SPG7-221ENST00000569720 BLZF1Q9H2G9 400 aa13.98□□□□□ -0.17
SPG7-221ENST00000569720 LINC00597Q9H2U6 94 aa13.98□□□□□ -0.17
SPG7-221ENST00000569720 SLC39A2Q9NP94 309 aa13.98□□□□□ -0.17
SPG7-221ENST00000569720 NXF1Q9UBU9 619 aaKnown RBP13.98□□□□□ -0.17
SPG7-221ENST00000569720 MYH10P35580 1976 aa13.98□□□□□ -0.17
SPG7-221ENST00000569720 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.97□□□□□ -0.17
SPG7-221ENST00000569720 ZNF840PA6NDX5 716 aa13.97□□□□□ -0.17
SPG7-221ENST00000569720 LEFTY2O00292 366 aa13.97□□□□□ -0.17
SPG7-221ENST00000569720 SLC9A3R1O14745 358 aaPredicted RBP13.97□□□□□ -0.17
SPG7-221ENST00000569720 GDF9O60383 454 aa13.97□□□□□ -0.17
SPG7-221ENST00000569720 APBB3O95704 486 aa13.97□□□□□ -0.17
SPG7-221ENST00000569720 ZNF806P0C7X5 589 aa13.97□□□□□ -0.17
SPG7-221ENST00000569720 AFMP43652 599 aa13.97□□□□□ -0.17
SPG7-221ENST00000569720 RAP1GAPP47736 663 aa13.97□□□□□ -0.17
SPG7-221ENST00000569720 AP3M2P53677 418 aa13.97□□□□□ -0.17
SPG7-221ENST00000569720 SLC7A9P82251 487 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms