RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 MAPRE1Q15691 268 aaKnown RBP9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 CFAP221Q4G0U5 840 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 GJB7Q6PEY0 223 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 SASS6Q6UVJ0 657 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 VITQ6UXI7 678 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 CLEC17AQ6ZS10 378 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 PAQR9Q6ZVX9 377 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 TMEM150AQ86TG1 271 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 ARHGEF19Q8IW93 802 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 SUGP1Q8IWZ8 645 aaKnown RBP9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 FUKQ8N0W3 1084 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 ARL14EPQ8N8R7 260 aaPredicted RBP9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 MLKLQ8NB16 471 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 LEMD2Q8NC56 503 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 SCAMP5Q8TAC9 235 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 SPATA18Q8TC71 538 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 WHAMMQ8TF30 809 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 MRPS31Q92665 395 aaKnown RBP9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 ASIC4Q96FT7 647 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 LRRC3BQ96PB8 259 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 SLC22A12Q96S37 553 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 NT5C1AQ9BXI3 368 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 BCO2Q9BYV7 579 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 FOXQ1Q9C009 403 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 AVENQ9NQS1 362 aaPredicted RBP9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 HEBP1Q9NRV9 189 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 CISHQ9NSE2 258 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 GDE1Q9NZC3 331 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 CCL26Q9Y258 94 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 PCDHB4Q9Y5E5 795 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 ZFP37Q9Y6Q3 630 aaPredicted RBP9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 PTPRDP23468 1912 aa9.58□□□□□ -0.88
GTF3C1-210ENST00000569394 ATP8B3O60423 1300 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 TICRRQ7Z2Z1 1910 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 HAX1O00165 279 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 PIK3R2O00459 728 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 PI15O43692 258 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 TADA3O75528 432 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 NOL4O94818 638 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 FGFR1OPO95684 399 aaKnown RBP9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 F11P03951 625 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 CKMP06732 381 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 SRFP11831 508 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 AVPR1AP37288 418 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 SOX9P48436 509 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 TAF10Q12962 218 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 CUL2Q13617 745 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 ARHGAP44Q17R89 818 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 PPP1R26Q5T8A7 1209 aaPredicted RBP9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 TRIM68Q6AZZ1 485 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 CAVIN1Q6NZI2 390 aaKnown RBP9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 VSTM1Q6UX27 236 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 NUP93Q8N1F7 819 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 UBA3Q8TBC4 463 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 ELSPBP1Q96BH3 223 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 SMARCD1Q96GM5 515 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 FUBP3Q96I24 572 aaKnown RBP eCLIP9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 NT5C1BQ96P26 610 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 SMOQ99835 787 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 TRMT61BQ9BVS5 477 aaKnown RBP9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 KDM4CQ9H3R0 1056 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 TASP1Q9H6P5 420 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 CYP3A43Q9HB55 503 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 ABCB6Q9NP58 842 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 SAMSN1Q9NSI8 373 aaKnown RBP9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 SMPD4Q9NXE4 827 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 HSFX1Q9UBD0 423 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 NDRG2Q9UN36 371 aaKnown RBP9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 OBSL1O75147 1896 aa9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 KIF26AQ9ULI4 1882 aaPredicted RBP9.57□□□□□ -0.88
GTF3C1-210ENST00000569394 GREB1Q4ZG55 1949 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 ZNF263O14978 683 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 CILPO75339 1184 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 ECI2O75521 394 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 GNA14O95837 355 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 DCNP07585 359 aaKnown RBP9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 FAM200BP0CF97 657 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 IRF1P10914 325 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 KRT5P13647 590 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 PSMC3P17980 439 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 TRIM21P19474 475 aaKnown RBP9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 SLC9A1P19634 815 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 YWHAQP27348 245 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 USP8P40818 1118 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 MAGEA11P43364 429 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 CLCN6P51797 869 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 SLC5A3P53794 718 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 RAD23BP54727 409 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 TNK2Q07912 1038 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 CETN1Q12798 172 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 UBXN2BQ14CS0 331 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 GOLGA7BQ2TAP0 167 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 SLC44A4Q53GD3 710 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 TMEM270Q6UE05 265 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 TPRG1Q6ZUI0 275 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 C11orf57Q6ZUT1 292 aaPredicted RBP9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 GPRIN1Q7Z2K8 1008 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 UNC93AQ86WB7 457 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 TRIM59Q8IWR1 403 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 CMTM8Q8IZV2 173 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms