RNA–Protein interactions for RNA: ENST00000568936.1

CCNDBP1-214, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 2,088 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-214ENST00000568936 TMEM173Q86WV6 379 aaPredicted RBP12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 ACTRT1Q8TDG2 376 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 NDRG1Q92597 394 aaKnown RBP12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 RNPC3Q96LT9 517 aaKnown RBP12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 HERPUD2Q9BSE4 406 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 SELENOOQ9BVL4 669 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 CARD9Q9H257 536 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 SYNCQ9H7C4 482 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 HESX1Q9UBX0 185 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 TCRBV7S2A1N4TA0A589 114 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 NRP1O14786 923 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 UPP2O95045 317 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 SETSIPP0DME0 302 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 SLC11A1P49279 550 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 BCAT1P54687 386 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 GPS2Q13227 327 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 SMC1AQ14683 1233 aaKnown RBP12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 FAM102AQ5T9C2 384 aaPredicted RBP12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 SH3PXD2AQ5TCZ1 1133 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 CLEC20AQ6ZU45 233 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 NPAS4Q8IUM7 802 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 ZMIZ2Q8NF64 920 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 HDAC7Q8WUI4 952 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 HINFPQ9BQA5 517 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.23□□□□□ -0.451e-7■■■■□ 22.8
CCNDBP1-214ENST00000568936 AP1M1Q9BXS5 423 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 DUSP16Q9BY84 665 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 MIS12Q9H081 205 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 PRDM10Q9NQV6 1147 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 MARCH5Q9NX47 278 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 KANSL3Q9P2N6 904 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 IP6K2Q9UHH9 426 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 LRFN2Q9ULH4 789 aa12.23□□□□□ -0.45
CCNDBP1-214ENST00000568936 CCDC66A2RUB6 948 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 NT5C1B-RDH14C9J2C7 533 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 TMEM189-UBE2V1I3L0A0 370 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 CSF2RAP15509 400 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 FLT3P36888 993 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 FAM171BQ6P995 826 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 ADAT2Q7Z6V5 191 aaKnown RBP12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 PIGZQ86VD9 579 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 MYCBPAPQ8TBZ2 947 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 STK32AQ8WU08 396 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 BCL7CQ8WUZ0 217 aaPredicted RBP12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 UBE2Q2Q8WVN8 375 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 B3GALT6Q96L58 329 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 KCNK16Q96T55 309 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 SMOQ99835 787 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 ADAM33Q9BZ11 813 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 GPR62Q9BZJ7 368 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 PRDM5Q9NQX1 630 aaPredicted RBP12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 WDR35Q9P2L0 1181 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 CDH9Q9ULB4 789 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 TTC7AQ9ULT0 858 aaPredicted RBP12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 LAMA2P24043 3122 aaKnown RBP12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 TBKBP1A7MCY6 615 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 PARNO95453 639 aaKnown RBP12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 FGGP02679 453 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 OR4Q2P0C623 313 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 LCP1P13796 627 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 EN2P19622 333 aaPredicted RBP12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 MAN1A1P33908 653 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 SLC1A1P43005 524 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 NDUFV1P49821 464 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 PLCB3Q01970 1234 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 INTS6LQ5JSJ4 861 aaKnown RBP12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 OVOS1Q6IE37 1185 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 CNKSR3Q6P9H4 555 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 GPRIN1Q7Z2K8 1008 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 NECAB2Q7Z6G3 386 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 FAM35AQ86V20 835 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 ABI1Q8IZP0 508 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 UBL4BQ8N7F7 174 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 NIPA2Q8N8Q9 360 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 IPO4Q8TEX9 1081 aaKnown RBP12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 ACBD6Q9BR61 282 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 LRRC1Q9BTT6 524 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 KRT82Q9NSB4 513 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 KLHL11Q9NVR0 708 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 PCDHB8Q9UN66 801 aa12.22□□□□□ -0.45
CCNDBP1-214ENST00000568936 C2CD4BA6NLJ0 364 aa12.21□□□□□ -0.45
CCNDBP1-214ENST00000568936 PGRMC1O00264 195 aaKnown RBP12.21□□□□□ -0.45
CCNDBP1-214ENST00000568936 XPO1O14980 1071 aaKnown RBP12.21□□□□□ -0.45
CCNDBP1-214ENST00000568936 KIAA0355O15063 1070 aa12.21□□□□□ -0.45
CCNDBP1-214ENST00000568936 TIMP1P01033 207 aa12.21□□□□□ -0.45
CCNDBP1-214ENST00000568936 ACRP10323 421 aa12.21□□□□□ -0.45
CCNDBP1-214ENST00000568936 NPR3P17342 541 aa12.21□□□□□ -0.45
CCNDBP1-214ENST00000568936 TFE3P19532 575 aaPredicted RBP12.21□□□□□ -0.45
CCNDBP1-214ENST00000568936 TYMPP19971 482 aa12.21□□□□□ -0.45
CCNDBP1-214ENST00000568936 IL1R2P27930 398 aa12.21□□□□□ -0.45
CCNDBP1-214ENST00000568936 GJC1P36383 396 aa12.21□□□□□ -0.45
CCNDBP1-214ENST00000568936 MAP3K7CLP57077 242 aa12.21□□□□□ -0.45
CCNDBP1-214ENST00000568936 DEFB103AP81534 67 aa12.21□□□□□ -0.45
CCNDBP1-214ENST00000568936 SLC6A3Q01959 620 aa12.21□□□□□ -0.45
CCNDBP1-214ENST00000568936 TAP1Q03518 808 aa12.21□□□□□ -0.45
CCNDBP1-214ENST00000568936 DMTNQ08495 405 aa12.21□□□□□ -0.45
CCNDBP1-214ENST00000568936 ADCY1Q08828 1119 aa12.21□□□□□ -0.45
CCNDBP1-214ENST00000568936 TERF2Q15554 542 aa12.21□□□□□ -0.45
CCNDBP1-214ENST00000568936 UBE2Q1Q7Z7E8 422 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms