RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	SIX4	Q9UIU6	781 aa		13.27	□□□□□ -0.29
PKM-222	ENST00000568883	CFAP69	A5D8W1	941 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	GOLGA8M	H3BSY2	632 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	HNRNPCL1	O60812	293 aa	Known RBP	13.26	□□□□□ -0.29
PKM-222	ENST00000568883	ARIH2	O95376	493 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	STAU1	O95793	577 aa	Known RBP	13.26	□□□□□ -0.29
PKM-222	ENST00000568883	ITGB3	P05106	788 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	STAG3L1	P0CL83	205 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	ALAD	P13716	330 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	GPD1	P21695	349 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	CCND1	P24385	295 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	IL1R2	P27930	398 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	RPA3	P35244	121 aa	Predicted RBP	13.26	□□□□□ -0.29
PKM-222	ENST00000568883	RAP1GAP	P47736	663 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	GPX6	P59796	221 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	KCNT1	Q5JUK3	1230 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.26	□□□□□ -0.29
PKM-222	ENST00000568883	EEF1DP3	Q658K8	133 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	SCARA3	Q6AZY7	606 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	ASRGL1	Q7L266	308 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	FAM228A	Q86W67	206 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	ECHDC2	Q86YB7	292 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.26	□□□□□ -0.29
PKM-222	ENST00000568883	C4orf33	Q8N1A6	199 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	ARFGAP1	Q8N6T3	406 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	FBXO36	Q8NEA4	188 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.26	□□□□□ -0.29
PKM-222	ENST00000568883	RMDN2	Q96LZ7	410 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	PAFAH2	Q99487	392 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	MMP19	Q99542	508 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	DHRS4	Q9BTZ2	278 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	CALN1	Q9BXU9	219 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	CYTH4	Q9UIA0	394 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	GGT7	Q9UJ14	662 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	ITGA11	Q9UKX5	1188 aa		13.26	□□□□□ -0.29
PKM-222	ENST00000568883	ASB14	A6NK59	587 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	LACTBL1	A8MY62	500 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	B4GALT5	O43286	388 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	PRPSAP2	O60256	369 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	WFS1	O76024	890 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	NFIC	P08651	508 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	TXN	P10599	105 aa	Known RBP	13.25	□□□□□ -0.29
PKM-222	ENST00000568883	RBP3	P10745	1247 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	KRT4	P19013	534 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	BASP1	P80723	227 aa	Known RBP	13.25	□□□□□ -0.29
PKM-222	ENST00000568883	PDK2	Q15119	407 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	BBS9	Q3SYG4	887 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	13.25	□□□□□ -0.29
PKM-222	ENST00000568883	DARS2	Q6PI48	645 aa	Known RBP	13.25	□□□□□ -0.29
PKM-222	ENST00000568883	C4orf22	Q6V702	233 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	AGGF1	Q8N302	714 aa	eCLIP	13.25	□□□□□ -0.29
PKM-222	ENST00000568883	SPATA18	Q8TC71	538 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	HSPH1	Q92598	858 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	INPP5D	Q92835	1189 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	HEXIM2	Q96MH2	286 aa	Known RBP	13.25	□□□□□ -0.29
PKM-222	ENST00000568883	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.25	□□□□□ -0.29
PKM-222	ENST00000568883	MROH8	Q9H579	483 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	SMYD3	Q9H7B4	428 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	PCSK1N	Q9UHG2	260 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	BARX2	Q9UMQ3	279 aa	Predicted RBP	13.25	□□□□□ -0.29
PKM-222	ENST00000568883	CLUH	O75153	1309 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	WDR90	Q96KV7	1748 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	CHAD	O15335	359 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	OSBP	P22059	807 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	GPD2	P43304	727 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	CLCN3	P51790	818 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	GDF10	P55107	478 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	KCNJ2	P63252	427 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	RBP5	P82980	135 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	CBLB	Q13191	982 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	MOGS	Q13724	837 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	DPYSL3	Q14195	570 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	TMEM132D	Q14C87	1099 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	NOMO1	Q15155	1222 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	PARP6	Q2NL67	630 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	JADE1	Q6IE81	842 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	CCDC62	Q6P9F0	684 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	LVRN	Q6Q4G3	990 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.25	□□□□□ -0.29
PKM-222	ENST00000568883	ERO1B	Q86YB8	467 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	SULF1	Q8IWU6	871 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	EMC1	Q8N766	993 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	CEP120	Q8N960	986 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	FAM71D	Q8N9W8	422 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	AFG1L	Q8WV93	481 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	APBB2	Q92870	758 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	DCPS	Q96C86	337 aa	Known RBP	13.25	□□□□□ -0.29
PKM-222	ENST00000568883	HPDL	Q96IR7	371 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	MYCBP	Q99417	103 aa	Predicted RBP	13.25	□□□□□ -0.29
PKM-222	ENST00000568883	ELOVL4	Q9GZR5	314 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	VPS11	Q9H270	941 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	IFT122	Q9HBG6	1241 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	PAK5	Q9P286	719 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	MCM8	Q9UJA3	840 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	C2CD2	Q9Y426	696 aa		13.25	□□□□□ -0.29
PKM-222	ENST00000568883	BRCA1	P38398	1863 aa	Known RBP	13.24	□□□□□ -0.29
PKM-222	ENST00000568883	DNAJC25-GNG10	A0A024R161	153 aa		13.24	□□□□□ -0.29
PKM-222	ENST00000568883	CNMD	O75829	334 aa		13.24	□□□□□ -0.29
PKM-222	ENST00000568883	C22orf31	O95567	290 aa		13.24	□□□□□ -0.29
PKM-222	ENST00000568883	MT-ND3	P03897	115 aa		13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms