RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 HELZP42694 1942 aaKnown RBP12.88□□□□□ -0.35
SF3B3-208ENST00000567250 F8VZ95 297 aa12.88□□□□□ -0.35
SF3B3-208ENST00000567250 NOL4O94818 638 aa12.88□□□□□ -0.35
SF3B3-208ENST00000567250 MICAL2O94851 1124 aa12.88□□□□□ -0.35
SF3B3-208ENST00000567250 SETSIPP0DME0 302 aa12.88□□□□□ -0.35
SF3B3-208ENST00000567250 MYL4P12829 197 aa12.88□□□□□ -0.35
SF3B3-208ENST00000567250 GBP2P32456 591 aaPredicted RBP12.88□□□□□ -0.35
SF3B3-208ENST00000567250 GPR15P49685 360 aa12.88□□□□□ -0.35
SF3B3-208ENST00000567250 MAP3K7CLP57077 242 aa12.88□□□□□ -0.35
SF3B3-208ENST00000567250 POLR2FP61218 127 aaKnown RBP12.88□□□□□ -0.35
SF3B3-208ENST00000567250 APBA1Q02410 837 aa12.88□□□□□ -0.35
SF3B3-208ENST00000567250 BST2Q10589 180 aaKnown RBP12.88□□□□□ -0.35
SF3B3-208ENST00000567250 DRAP1Q14919 205 aaPredicted RBP12.88□□□□□ -0.35
SF3B3-208ENST00000567250 GOLGA7BQ2TAP0 167 aa12.88□□□□□ -0.35
SF3B3-208ENST00000567250 ARHGAP15Q53QZ3 475 aa12.88□□□□□ -0.35
SF3B3-208ENST00000567250 CLEC20AQ6ZU45 233 aa12.88□□□□□ -0.35
SF3B3-208ENST00000567250 PAQR9Q6ZVX9 377 aa12.88□□□□□ -0.35
SF3B3-208ENST00000567250 DNAJB7Q7Z6W7 309 aaPredicted RBP12.88□□□□□ -0.35
SF3B3-208ENST00000567250 ADHFE1Q8IWW8 467 aa12.88□□□□□ -0.35
SF3B3-208ENST00000567250 NUP93Q8N1F7 819 aa12.88□□□□□ -0.35
SF3B3-208ENST00000567250 PDZD8Q8NEN9 1154 aa12.88□□□□□ -0.35
SF3B3-208ENST00000567250 MYRFLQ96LU7 910 aa12.88□□□□□ -0.35
SF3B3-208ENST00000567250 SLITRK1Q96PX8 696 aa12.88□□□□□ -0.35
SF3B3-208ENST00000567250 NAA15Q9BXJ9 866 aaKnown RBP12.88□□□□□ -0.35
SF3B3-208ENST00000567250 DUSP16Q9BY84 665 aa12.88□□□□□ -0.35
SF3B3-208ENST00000567250 FBXO44Q9H4M3 255 aa12.88□□□□□ -0.35
SF3B3-208ENST00000567250 COMMD8Q9NX08 183 aa12.88□□□□□ -0.35
SF3B3-208ENST00000567250 CDH22Q9UJ99 828 aa12.88□□□□□ -0.35
SF3B3-208ENST00000567250 MAGED2Q9UNF1 606 aaPredicted RBP12.88□□□□□ -0.35
SF3B3-208ENST00000567250 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.88□□□□□ -0.35
SF3B3-208ENST00000567250 TCF20Q9UGU0 1960 aaKnown RBP12.88□□□□□ -0.35
SF3B3-208ENST00000567250 DOCK8Q8NF50 2099 aa12.88□□□□□ -0.35
SF3B3-208ENST00000567250 M0QYV0 167 aa12.87□□□□□ -0.35
SF3B3-208ENST00000567250 O00370 1275 aa12.87□□□□□ -0.35
SF3B3-208ENST00000567250 THAP12O43422 761 aa12.87□□□□□ -0.35
SF3B3-208ENST00000567250 CCDC172P0C7W6 258 aa12.87□□□□□ -0.35
SF3B3-208ENST00000567250 BMP1P13497 986 aa12.87□□□□□ -0.35
SF3B3-208ENST00000567250 BRD2P25440 801 aaKnown RBP12.87□□□□□ -0.35
SF3B3-208ENST00000567250 GABRR2P28476 465 aa12.87□□□□□ -0.35
SF3B3-208ENST00000567250 PPP3CCP48454 512 aa12.87□□□□□ -0.35
SF3B3-208ENST00000567250 KLK7P49862 253 aa12.87□□□□□ -0.35
SF3B3-208ENST00000567250 PDE6CP51160 858 aa12.87□□□□□ -0.35
SF3B3-208ENST00000567250 SLC5A3P53794 718 aa12.87□□□□□ -0.35
SF3B3-208ENST00000567250 PRSS36Q5K4E3 855 aa12.87□□□□□ -0.35
SF3B3-208ENST00000567250 LCLAT1Q6UWP7 414 aa12.87□□□□□ -0.35
SF3B3-208ENST00000567250 TMC8Q8IU68 726 aa12.87□□□□□ -0.35
SF3B3-208ENST00000567250 FAM71AQ8IYT1 594 aa12.87□□□□□ -0.35
SF3B3-208ENST00000567250 ANKRD52Q8NB46 1076 aa12.87□□□□□ -0.35
SF3B3-208ENST00000567250 OVCA2Q8WZ82 227 aa12.87□□□□□ -0.35
SF3B3-208ENST00000567250 NUP58Q9BVL2 599 aa12.87□□□□□ -0.35
SF3B3-208ENST00000567250 GPR88Q9GZN0 384 aa12.87□□□□□ -0.35
SF3B3-208ENST00000567250 ATXN3LQ9H3M9 355 aa12.87□□□□□ -0.35
SF3B3-208ENST00000567250 IFNKQ9P0W0 207 aa12.87□□□□□ -0.35
SF3B3-208ENST00000567250 CEP83Q9Y592 693 aa12.87□□□□□ -0.35
SF3B3-208ENST00000567250 DOCK6Q96HP0 2047 aa12.87□□□□□ -0.35
SF3B3-208ENST00000567250 ANAPC1Q9H1A4 1944 aa12.87□□□□□ -0.35
SF3B3-208ENST00000567250 A0A1W2PRU2 124 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 RNF225M0QZC1 329 aaPredicted RBP12.86□□□□□ -0.35
SF3B3-208ENST00000567250 XPO1O14980 1071 aaKnown RBP12.86□□□□□ -0.35
SF3B3-208ENST00000567250 TEX33O43247 280 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 HMGA1P17096 107 aaKnown RBP12.86□□□□□ -0.35
SF3B3-208ENST00000567250 DDX6P26196 483 aaKnown RBP eCLIP12.86□□□□□ -0.35
SF3B3-208ENST00000567250 STAT1P42224 750 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 CACNA2D1P54289 1103 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 NTHL1P78549 312 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 ZP2Q05996 745 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 IFRD2Q12894 506 aaPredicted RBP12.86□□□□□ -0.35
SF3B3-208ENST00000567250 NR1I3Q14994 352 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 CNGA2Q16280 664 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 FIGNQ5HY92 759 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 SDHAF4Q5VUM1 108 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 DPY19L2P1Q6NXN4 242 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 HS6ST3Q8IZP7 471 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 GPR152Q8TDT2 470 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 ADAMTS19Q8TE59 1207 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 MRPS31Q92665 395 aaKnown RBP12.86□□□□□ -0.35
SF3B3-208ENST00000567250 RPGRIP1Q96KN7 1286 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 NAP1L5Q96NT1 182 aaPredicted RBP12.86□□□□□ -0.35
SF3B3-208ENST00000567250 KCNK16Q96T55 309 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 SMOQ99835 787 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 TTLL2Q9BWV7 592 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 UBXN6Q9BZV1 441 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 SLITRK6Q9H5Y7 841 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 NLRC4Q9NPP4 1024 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 GDE1Q9NZC3 331 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 AJAP1Q9UKB5 411 aaPredicted RBP12.86□□□□□ -0.35
SF3B3-208ENST00000567250 CDH7Q9ULB5 785 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 MYO6Q9UM54 1294 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 NCANO14594 1321 aa12.86□□□□□ -0.35
SF3B3-208ENST00000567250 SOBPA7XYQ1 873 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 FOXN3O00409 490 aaPredicted RBP12.85□□□□□ -0.35
SF3B3-208ENST00000567250 EPHB6O15197 1021 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 CYP26A1O43174 497 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 CEBPBP17676 345 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 SP100P23497 879 aaPredicted RBP12.85□□□□□ -0.35
SF3B3-208ENST00000567250 YWHAQP27348 245 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 KRT9P35527 623 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 SOX5P35711 763 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 PLA2G4AP47712 749 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 JAM2P57087 298 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms