RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 KIAA1958Q8N8K9 716 aa15.19■□□□□ 0.02
COMMD4-216ENST00000567023 ARL14EPQ8N8R7 260 aaPredicted RBP15.19■□□□□ 0.02
COMMD4-216ENST00000567023 B3GALNT2Q8NCR0 500 aa15.19■□□□□ 0.02
COMMD4-216ENST00000567023 OSCP1Q8WVF1 389 aa15.19■□□□□ 0.02
COMMD4-216ENST00000567023 HINFPQ9BQA5 517 aa15.19■□□□□ 0.02
COMMD4-216ENST00000567023 ELOVL4Q9GZR5 314 aa15.19■□□□□ 0.02
COMMD4-216ENST00000567023 ARHGAP26Q9UNA1 814 aa15.19■□□□□ 0.02
COMMD4-216ENST00000567023 C2orf78A6NCI8 922 aa15.18■□□□□ 0.02
COMMD4-216ENST00000567023 F8VP50 259 aa15.18■□□□□ 0.02
COMMD4-216ENST00000567023 IKBKBO14920 756 aa15.18■□□□□ 0.02
COMMD4-216ENST00000567023 PHACTR2O75167 634 aa15.18■□□□□ 0.02
COMMD4-216ENST00000567023 RPN1P04843 607 aaKnown RBP15.18■□□□□ 0.02
COMMD4-216ENST00000567023 ARSAP15289 507 aa15.18■□□□□ 0.02
COMMD4-216ENST00000567023 HDCP19113 662 aa15.18■□□□□ 0.02
COMMD4-216ENST00000567023 ANXA13P27216 316 aa15.18■□□□□ 0.02
COMMD4-216ENST00000567023 SYKP43405 635 aa15.18■□□□□ 0.02
COMMD4-216ENST00000567023 GRSF1Q12849 480 aaKnown RBP eCLIP15.18■□□□□ 0.02
COMMD4-216ENST00000567023 USP4Q13107 963 aa15.18■□□□□ 0.02
COMMD4-216ENST00000567023 NCOA4Q13772 614 aa15.18■□□□□ 0.02
COMMD4-216ENST00000567023 SECISBP2LQ93073 1101 aaKnown RBP15.18■□□□□ 0.02
COMMD4-216ENST00000567023 SCAND2PQ9GZW5 306 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-216ENST00000567023 DPEP3Q9H4B8 488 aa15.18■□□□□ 0.02
COMMD4-216ENST00000567023 ECT2Q9H8V3 914 aa15.18■□□□□ 0.02
COMMD4-216ENST00000567023 TRPC7Q9HCX4 862 aa15.18■□□□□ 0.02
COMMD4-216ENST00000567023 DUS2Q9NX74 493 aaKnown RBP15.18■□□□□ 0.02
COMMD4-216ENST00000567023 TRPM5Q9NZQ8 1165 aa15.18■□□□□ 0.02
COMMD4-216ENST00000567023 NCDNQ9UBB6 729 aa15.18■□□□□ 0.02
COMMD4-216ENST00000567023 NXF1Q9UBU9 619 aaKnown RBP15.18■□□□□ 0.02
COMMD4-216ENST00000567023 TRAF3IP3Q9Y228 551 aa15.18■□□□□ 0.02
COMMD4-216ENST00000567023 ATP6V1DQ9Y5K8 247 aa15.18■□□□□ 0.02
COMMD4-216ENST00000567023 ZNF840PA6NDX5 716 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 A8MXQ7 604 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 MAPK13O15264 365 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 RHOBTB3O94955 611 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 KIF20AO95235 890 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 VNN1O95497 513 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 OLFM2O95897 454 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 NR3C1P04150 777 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 DRD1P21728 446 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 TGM1P22735 817 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 GJA4P35212 333 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 NDUFA8P51970 172 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 CACNA2D1P54289 1103 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 ZXDBP98169 803 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 BIRC3Q13489 604 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 KCNB1Q14721 858 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 NFIL3Q16649 462 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 SGSM1Q2NKQ1 1148 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 ZNF699Q32M78 642 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 EML3Q32P44 896 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 ZACNQ401N2 412 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 FSTL4Q6MZW2 842 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 LONP2Q86WA8 852 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 TMC2Q8TDI7 906 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 ATP2A3Q93084 1043 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 EXOC4Q96A65 974 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 RMDN1Q96DB5 314 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 B3GNT5Q9BYG0 378 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 FBRSL1Q9HCM7 1045 aaKnown RBP15.17■□□□□ 0.02
COMMD4-216ENST00000567023 TMEM30AQ9NV96 361 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 C2orf42Q9NWW7 574 aa15.17■□□□□ 0.02
COMMD4-216ENST00000567023 CCDC163A0A0D9SF12 145 aa15.16■□□□□ 0.02
COMMD4-216ENST00000567023 A0A1W2PQ27 194 aa15.16■□□□□ 0.02
COMMD4-216ENST00000567023 A0A1W2PQ64 194 aa15.16■□□□□ 0.02
COMMD4-216ENST00000567023 A0A1W2PQD8 194 aa15.16■□□□□ 0.02
COMMD4-216ENST00000567023 CHURC1-FNTBB4DL54 471 aa15.16■□□□□ 0.02
COMMD4-216ENST00000567023 HRO43593 1189 aa15.16■□□□□ 0.02
COMMD4-216ENST00000567023 ATG13O75143 517 aa15.16■□□□□ 0.02
COMMD4-216ENST00000567023 GALK1P51570 392 aa15.16■□□□□ 0.02
COMMD4-216ENST00000567023 CDH8P55286 799 aa15.16■□□□□ 0.02
COMMD4-216ENST00000567023 DLG4P78352 724 aa15.16■□□□□ 0.02
COMMD4-216ENST00000567023 SLC7A9P82251 487 aa15.16■□□□□ 0.02
COMMD4-216ENST00000567023 DMWDQ09019 674 aa15.16■□□□□ 0.02
COMMD4-216ENST00000567023 DPYDQ12882 1025 aa15.16■□□□□ 0.02
COMMD4-216ENST00000567023 BECN1Q14457 450 aa15.16■□□□□ 0.02
COMMD4-216ENST00000567023 FBXO43Q4G163 708 aa15.16■□□□□ 0.02
COMMD4-216ENST00000567023 ZNF667Q5HYK9 610 aa15.16■□□□□ 0.02
COMMD4-216ENST00000567023 NUP93Q8N1F7 819 aa15.16■□□□□ 0.02
COMMD4-216ENST00000567023 CPA6Q8N4T0 437 aa15.16■□□□□ 0.02
COMMD4-216ENST00000567023 SH3RF2Q8TEC5 729 aa15.16■□□□□ 0.02
COMMD4-216ENST00000567023 TAF4BQ92750 862 aa15.16■□□□□ 0.02
COMMD4-216ENST00000567023 CHAMP1Q96JM3 812 aa15.16■□□□□ 0.02
COMMD4-216ENST00000567023 TNIP3Q96KP6 325 aa15.16■□□□□ 0.02
COMMD4-216ENST00000567023 ZNF518BQ9C0D4 1074 aa15.16■□□□□ 0.02
COMMD4-216ENST00000567023 DLL3Q9NYJ7 618 aa15.16■□□□□ 0.02
COMMD4-216ENST00000567023 CLDN5O00501 218 aa15.15■□□□□ 0.02
COMMD4-216ENST00000567023 CALUO43852 315 aaPredicted RBP15.15■□□□□ 0.02
COMMD4-216ENST00000567023 OAS1P00973 400 aaKnown RBP15.15■□□□□ 0.02
COMMD4-216ENST00000567023 IFNAR2P48551 515 aa15.15■□□□□ 0.02
COMMD4-216ENST00000567023 FNTBP49356 437 aa15.15■□□□□ 0.02
COMMD4-216ENST00000567023 MCCD1P59942 119 aaPredicted RBP15.15■□□□□ 0.02
COMMD4-216ENST00000567023 ENPEPQ07075 957 aa15.15■□□□□ 0.02
COMMD4-216ENST00000567023 TAF10Q12962 218 aa15.15■□□□□ 0.02
COMMD4-216ENST00000567023 PUM1Q14671 1186 aaKnown RBP eCLIP15.15■□□□□ 0.02
COMMD4-216ENST00000567023 C1orf220Q5T0J3 134 aa15.15■□□□□ 0.02
COMMD4-216ENST00000567023 LAIR1Q6GTX8 287 aa15.15■□□□□ 0.02
COMMD4-216ENST00000567023 PAQR9Q6ZVX9 377 aa15.15■□□□□ 0.02
COMMD4-216ENST00000567023 SV2AQ7L0J3 742 aa15.15■□□□□ 0.02
COMMD4-216ENST00000567023 WDR5BQ86VZ2 330 aa15.15■□□□□ 0.02
COMMD4-216ENST00000567023 OVCA2Q8WZ82 227 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms