RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 GPNMBQ14956 572 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 CNGA2Q16280 664 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 LONRF2Q1L5Z9 754 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 KIAA0319Q5VV43 1072 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 WSCD1Q658N2 575 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 C11orf63Q6NUN7 778 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 CC2D1AQ6P1N0 951 aaPredicted RBP6.57□□□□□ -1.36
CHD9-217ENST00000565832 ZNF572Q7Z3I7 529 aaPredicted RBP6.57□□□□□ -1.36
CHD9-217ENST00000565832 APBB1IPQ7Z5R6 666 aaPredicted RBP6.57□□□□□ -1.36
CHD9-217ENST00000565832 RPAINQ86UA6 219 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 OSTM1Q86WC4 334 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 TTC30AQ86WT1 665 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 NT5DC4Q86YG4 428 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 CCDC116Q8IYX3 515 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 MMGT1Q8N4V1 131 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 ARFGAP1Q8N6T3 406 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 ACTRT1Q8TDG2 376 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 NDRG1Q92597 394 aaKnown RBP6.57□□□□□ -1.36
CHD9-217ENST00000565832 PBKQ96KB5 322 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 FAM118BQ9BPY3 351 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 HEMGNQ9BXL5 484 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.57□□□□□ -1.361e-6■■■■■ 28.4
CHD9-217ENST00000565832 RNF208Q9H0X6 261 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 CYP3A43Q9HB55 503 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 AMACRQ9UHK6 382 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 TMEM59LQ9UK28 342 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 A0A0U1RQF3 1178 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 PI4K2BG5E9Z4 385 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 CLDN5O00501 218 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 CYB561D2O14569 222 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 SART1O43290 800 aaKnown RBP6.57□□□□□ -1.36
CHD9-217ENST00000565832 RAD51CO43502 376 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 LILRA1O75019 489 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 BEST1O76090 585 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 GNRH1P01148 92 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 CD4P01730 458 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 THP07101 528 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 VDRP11473 427 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 ADORA2BP29275 332 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 WEE1P30291 646 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 SLC19A1P41440 591 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 YWHAEP62258 255 aaKnown RBP6.57□□□□□ -1.36
CHD9-217ENST00000565832 ADCY2Q08462 1091 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 DSC3Q14574 896 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 TCTN1Q2MV58 587 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 GOLGA7BQ2TAP0 167 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 SGO2Q562F6 1265 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 FAM182AQ5T1J6 154 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 LIN9Q5TKA1 542 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 DCUN1D2Q6PH85 259 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 TRIM72Q6ZMU5 477 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 CAPN12Q6ZSI9 719 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 DDX42Q86XP3 938 aaKnown RBP eCLIP6.57□□□□□ -1.36
CHD9-217ENST00000565832 ZNF280BQ86YH2 543 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 RASGEF1CQ8N431 466 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 LRRC52Q8N7C0 313 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 APPL2Q8NEU8 664 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 FEZF2Q8TBJ5 459 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 CLEC4CQ8WTT0 213 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 C18orf8Q96DM3 657 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 VCPIP1Q96JH7 1222 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 RPS6KC1Q96S38 1066 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 SELENOOQ9BVL4 669 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 LHX5Q9H2C1 402 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 SYNCQ9H7C4 482 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 AVENQ9NQS1 362 aaPredicted RBP6.57□□□□□ -1.36
CHD9-217ENST00000565832 CHST12Q9NRB3 414 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 PARVAQ9NVD7 372 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 RAB21Q9UL25 225 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 PCDHA3Q9Y5H8 950 aa6.57□□□□□ -1.36
CHD9-217ENST00000565832 E5RJQ4 531 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 ARVCFO00192 962 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 PGRMC1O00264 195 aaKnown RBP6.56□□□□□ -1.36
CHD9-217ENST00000565832 MED7O43513 233 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 PQBP1O60828 265 aaKnown RBP6.56□□□□□ -1.36
CHD9-217ENST00000565832 B3GAT3O94766 335 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 PROSCO94903 275 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 LSM8O95777 96 aaKnown RBP6.56□□□□□ -1.36
CHD9-217ENST00000565832 MYBL1P10243 752 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 KRT3P12035 628 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 TKTP29401 623 aaKnown RBP6.56□□□□□ -1.36
CHD9-217ENST00000565832 CDH5P33151 784 aaPredicted RBP6.56□□□□□ -1.36
CHD9-217ENST00000565832 CTNNA1P35221 906 aaKnown RBP6.56□□□□□ -1.36
CHD9-217ENST00000565832 KCNJ1P48048 391 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 TAF6P49848 677 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 GDF10P55107 478 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 GUCY2DQ02846 1103 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 PDCLQ13371 301 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 KCNT1Q5JUK3 1230 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 BEND6Q5SZJ8 279 aaPredicted RBP6.56□□□□□ -1.36
CHD9-217ENST00000565832 TRNP1Q6NT89 227 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 DNAJC24Q6P3W2 148 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 LCLAT1Q6UWP7 414 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 CCNI2Q6ZMN8 369 aaPredicted RBP6.56□□□□□ -1.36
CHD9-217ENST00000565832 XYLT1Q86Y38 959 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 SLC43A3Q8NBI5 491 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 SLC2A14Q8TDB8 520 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 LINC01599Q8WXQ3 324 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 IFT81Q8WYA0 676 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 SENP8Q96LD8 212 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms