RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 ZNF398Q8TD17 642 aa17.02■□□□□ 0.31
LINC00554-201ENST00000564841 GDPD5Q8WTR4 605 aa17.02■□□□□ 0.31
LINC00554-201ENST00000564841 CRYGNQ8WXF5 182 aa17.02■□□□□ 0.31
LINC00554-201ENST00000564841 PAFAH2Q99487 392 aa17.02■□□□□ 0.31
LINC00554-201ENST00000564841 ZNF577Q9BSK1 485 aa17.02■□□□□ 0.31
LINC00554-201ENST00000564841 KLHL4Q9C0H6 718 aa17.02■□□□□ 0.31
LINC00554-201ENST00000564841 RANBP17Q9H2T7 1088 aaKnown RBP17.02■□□□□ 0.31
LINC00554-201ENST00000564841 SUDS3Q9H7L9 328 aaPredicted RBP17.02■□□□□ 0.31
LINC00554-201ENST00000564841 LIN28AQ9H9Z2 209 aaKnown RBP17.02■□□□□ 0.31
LINC00554-201ENST00000564841 UQCRBP14927 111 aa17.01■□□□□ 0.31
LINC00554-201ENST00000564841 C1orf220Q5T0J3 134 aa17.01■□□□□ 0.31
LINC00554-201ENST00000564841 NET1Q7Z628 596 aaPredicted RBP17.01■□□□□ 0.31
LINC00554-201ENST00000564841 ARID3BQ8IVW6 561 aaPredicted RBP17.01■□□□□ 0.31
LINC00554-201ENST00000564841 ZFP28Q8NHY6 868 aa17.01■□□□□ 0.31
LINC00554-201ENST00000564841 SERAC1Q96JX3 654 aa17.01■□□□□ 0.31
LINC00554-201ENST00000564841 RPAP3Q9H6T3 665 aaPredicted RBP17.01■□□□□ 0.31
LINC00554-201ENST00000564841 SAE1Q9UBE0 346 aaPredicted RBP17.01■□□□□ 0.31
LINC00554-201ENST00000564841 RABGEF1Q9UJ41 708 aa17.01■□□□□ 0.31
LINC00554-201ENST00000564841 CAPN8A6NHC0 703 aa17.01■□□□□ 0.31
LINC00554-201ENST00000564841 DNAJC6O75061 913 aa17.01■□□□□ 0.31
LINC00554-201ENST00000564841 ATF7P17544 494 aaPredicted RBP17.01■□□□□ 0.31
LINC00554-201ENST00000564841 GTF2H1P32780 548 aa17.01■□□□□ 0.31
LINC00554-201ENST00000564841 KRT72Q14CN4 511 aa17.01■□□□□ 0.31
LINC00554-201ENST00000564841 PRKD1Q15139 912 aaPredicted RBP17.01■□□□□ 0.31
LINC00554-201ENST00000564841 TRIP10Q15642 601 aa17.01■□□□□ 0.31
LINC00554-201ENST00000564841 TRIM67Q6ZTA4 783 aa17.01■□□□□ 0.31
LINC00554-201ENST00000564841 DHDDSQ86SQ9 333 aa17.01■□□□□ 0.31
LINC00554-201ENST00000564841 TDRPQ86YL5 185 aa17.01■□□□□ 0.31
LINC00554-201ENST00000564841 BANPQ8N9N5 519 aa17.01■□□□□ 0.31
LINC00554-201ENST00000564841 MORC4Q8TE76 937 aa17.01■□□□□ 0.31
LINC00554-201ENST00000564841 DGCR14Q96DF8 476 aaKnown RBP17.01■□□□□ 0.31
LINC00554-201ENST00000564841 HSD17B14Q9BPX1 270 aa17.01■□□□□ 0.31
LINC00554-201ENST00000564841 PLVAPQ9BX97 442 aa17.01■□□□□ 0.31
LINC00554-201ENST00000564841 TOPORSQ9NS56 1045 aaPredicted RBP17.01■□□□□ 0.31
LINC00554-201ENST00000564841 DMAC2Q9NW81 257 aa17.01■□□□□ 0.31
LINC00554-201ENST00000564841 GGA3Q9NZ52 723 aa17.01■□□□□ 0.31
LINC00554-201ENST00000564841 IGLV3-22A0A075B6J6 115 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 F8W8V4 182 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 LPXNO60711 386 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 MAGEC1O60732 1142 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 CYP3A4P08684 503 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 EMP3P54852 163 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 ANKRD22Q5VYY1 191 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 CDHR3Q6ZTQ4 885 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 C3orf62Q6ZUJ4 267 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 SYDE1Q6ZW31 735 aaPredicted RBP17■□□□□ 0.31
LINC00554-201ENST00000564841 DDX51Q8N8A6 666 aaKnown RBP eCLIP17■□□□□ 0.31
LINC00554-201ENST00000564841 FAM172AQ8WUF8 416 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 LXNQ9BS40 222 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 POLR3CQ9BUI4 534 aaPredicted RBP17■□□□□ 0.31
LINC00554-201ENST00000564841 WDR11Q9BZH6 1224 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 S100A14Q9HCY8 104 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 FEM1BQ9UK73 627 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 APPL1Q9UKG1 709 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 ARFGEF1Q9Y6D6 1849 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 C15orf38-AP3S2A0A0A6YYH1 394 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 A0A1B0GTW7 788 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 DENND3A2RUS2 1198 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 CAPN14A8MX76 684 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 DNALI1O14645 258 aaPredicted RBP17■□□□□ 0.31
LINC00554-201ENST00000564841 C6orf222P0C671 652 aaPredicted RBP17■□□□□ 0.31
LINC00554-201ENST00000564841 GZMAP12544 262 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 SLC18A1P54219 525 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 GEMIN4P57678 1058 aaKnown RBP17■□□□□ 0.31
LINC00554-201ENST00000564841 TBL3Q12788 808 aaKnown RBP17■□□□□ 0.31
LINC00554-201ENST00000564841 TCEAL1Q15170 157 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 TRMT5Q32P41 509 aaKnown RBP17■□□□□ 0.31
LINC00554-201ENST00000564841 GRAMD1BQ3KR37 738 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 FNBP1LQ5T0N5 605 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 IYDQ6PHW0 289 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 ARPINQ7Z6K5 226 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 FAM71AQ8IYT1 594 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 ARHGAP24Q8N264 748 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 NAP1L4Q99733 375 aaKnown RBP17■□□□□ 0.31
LINC00554-201ENST00000564841 EBF4Q9BQW3 602 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 WDR83Q9BRX9 315 aaKnown RBP17■□□□□ 0.31
LINC00554-201ENST00000564841 TUBB6Q9BUF5 446 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 CYP4F11Q9HBI6 524 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 OLFML3Q9NRN5 406 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 UBAP1Q9NZ09 502 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 IL1RAPL1Q9NZN1 696 aa17■□□□□ 0.31
LINC00554-201ENST00000564841 A0A088AWK7 358 aa16.99■□□□□ 0.31
LINC00554-201ENST00000564841 CYB561D2O14569 222 aa16.99■□□□□ 0.31
LINC00554-201ENST00000564841 GLRA2P23416 452 aa16.99■□□□□ 0.31
LINC00554-201ENST00000564841 VARSP26640 1264 aaKnown RBP16.99■□□□□ 0.31
LINC00554-201ENST00000564841 PLCB3Q01970 1234 aa16.99■□□□□ 0.31
LINC00554-201ENST00000564841 MTA1Q13330 715 aa16.99■□□□□ 0.31
LINC00554-201ENST00000564841 CCNG2Q16589 344 aa16.99■□□□□ 0.31
LINC00554-201ENST00000564841 CEP55Q53EZ4 464 aa16.99■□□□□ 0.31
LINC00554-201ENST00000564841 C6orf163Q5TEZ5 329 aa16.99■□□□□ 0.31
LINC00554-201ENST00000564841 UGT2A3Q6UWM9 527 aa16.99■□□□□ 0.31
LINC00554-201ENST00000564841 RELL1Q8IUW5 271 aa16.99■□□□□ 0.31
LINC00554-201ENST00000564841 ATG4CQ96DT6 458 aa16.99■□□□□ 0.31
LINC00554-201ENST00000564841 PRICKLE1Q96MT3 831 aaPredicted RBP16.99■□□□□ 0.31
LINC00554-201ENST00000564841 TMEM121Q9BTD3 319 aa16.99■□□□□ 0.31
LINC00554-201ENST00000564841 PGAP2Q9UHJ9 254 aa16.99■□□□□ 0.31
LINC00554-201ENST00000564841 ARHGEF35A5YM69 484 aa16.99■□□□□ 0.31
LINC00554-201ENST00000564841 FAM155BO75949 473 aa16.99■□□□□ 0.31
LINC00554-201ENST00000564841 CFHP08603 1231 aa16.99■□□□□ 0.31
LINC00554-201ENST00000564841 CCDC166P0CW27 439 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms