RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 KAT6AQ92794 2004 aa7.65□□□□□ -1.19
HERPUD1-209ENST00000564678 A0A087WZ62 844 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 CCL15-CCL14A0A0B4J2E2 113 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 RRN3P2A6NIE6 340 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 LACTBL1A8MY62 500 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 B4GALT5O43286 388 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 SNAI1O95863 264 aaPredicted RBP7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 GJB1P08034 283 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 WEE2P0C1S8 567 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 IQCF3P0C7M6 154 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 CXCL8P10145 99 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 PTPN7P35236 360 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 MDH1P40925 334 aaKnown RBP7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 KCNJ1P48048 391 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 CDR1P51861 262 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 PTK6Q13882 451 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 GRB14Q14449 540 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 ACAP1Q15027 740 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 CCL15Q16663 113 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 INO80DQ53TQ3 878 aaPredicted RBP7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 TMEM63BQ5T3F8 832 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 C6orf118Q5T5N4 469 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 DENND2CQ68D51 928 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 ASTLQ6HA08 431 aaPredicted RBP7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 DNAJC24Q6P3W2 148 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 DCUN1D2Q6PH85 259 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 CEP128Q6ZU80 1094 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 TRMT10CQ7L0Y3 403 aaKnown RBP7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 POLNQ7Z5Q5 900 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 DPP9Q86TI2 863 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 WDTC1Q8N5D0 677 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 CEP120Q8N960 986 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 CCDC89Q8N998 374 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 C1orf127Q8N9H9 656 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 CCHCR1Q8TD31 782 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 AFG1LQ8WV93 481 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 PGM2Q96G03 612 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 FDXACB1Q9BRP7 624 aaPredicted RBP7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 ADPGKQ9BRR6 497 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 C2orf49Q9BVC5 232 aaPredicted RBP7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 ASPSCR1Q9BZE9 553 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 FOXP3Q9BZS1 431 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 ROPN1BQ9BZX4 212 aaPredicted RBP7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 ROPN1Q9HAT0 212 aaPredicted RBP7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 SLC5A4Q9NY91 659 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 SIX4Q9UIU6 781 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 KIAA1257Q9ULG3 409 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 AKT3Q9Y243 479 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 ZSWIM8A7E2V4 1837 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 A0A1B0GUA9 196 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 SIGLEC16A6NMB1 481 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 NDC80O14777 642 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 AKAP10O43572 662 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 TJP3O95049 919 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 CCNYL3P0C7X3 344 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 RALAP11233 206 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 MYCLP1P12525 358 aaPredicted RBP7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 CD58P19256 250 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 IVDP26440 423 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 RAB15P59190 212 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 TAS2R40P59535 323 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 KRT17Q04695 432 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 ADCY2Q08462 1091 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 ZNF268Q14587 947 aaPredicted RBP7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 ZRSR2Q15696 482 aaKnown RBP7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 DGKDQ16760 1214 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 FAM110CQ1W6H9 321 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 WDR72Q3MJ13 1102 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 KRT71Q3SY84 523 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 C2CD6Q53TS8 623 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 C1orf53Q5VUE5 145 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 SCARA3Q6AZY7 606 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 SPATC1Q76KD6 591 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 GPR142Q7Z601 462 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 CCDC50Q8IVM0 306 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 SH2D3CQ8N5H7 860 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 CXorf38Q8TB03 319 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 BCAS4Q8TDM0 211 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 C1orf54Q8WWF1 131 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 SNF8Q96H20 258 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 MIS12Q9H081 205 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 EPB41L4BQ9H329 900 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 PDZD7Q9H5P4 517 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 CNOT10Q9H9A5 744 aaKnown RBP7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 PLEKHA5Q9HAU0 1116 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 EVA1BQ9NVM1 165 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 UBP1Q9NZI7 540 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 ITGA11Q9UKX5 1188 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 PPT2Q9UMR5 302 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 LZTS1Q9Y250 596 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 DRG1Q9Y295 367 aaKnown RBP7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 PTPN22Q9Y2R2 807 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 PLXNB2O15031 1838 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 GRIN2DO15399 1336 aa7.64□□□□□ -1.19
HERPUD1-209ENST00000564678 KRT19P08727 400 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 VDRP11473 427 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 ARF4P18085 180 aaPredicted RBP7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 ADCYAP1R1P41586 468 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 GABRB2P47870 512 aa7.63□□□□□ -1.19
HERPUD1-209ENST00000564678 RAD23BP54727 409 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms