RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 ARIH1Q9Y4X5 557 aaPredicted RBP30.05■■■□□ 2.4
NME3-203ENST00000563367 SOBPA7XYQ1 873 aa30.04■■■□□ 2.4
NME3-203ENST00000563367 DPYSL4O14531 572 aa30.04■■■□□ 2.4
NME3-203ENST00000563367 FCHO2Q0JRZ9 810 aa30.04■■■□□ 2.4
NME3-203ENST00000563367 PRSS33Q8NF86 280 aa30.04■■■□□ 2.4
NME3-203ENST00000563367 DNASE1L2Q92874 299 aa30.04■■■□□ 2.4
NME3-203ENST00000563367 SMARCD1Q96GM5 515 aa30.04■■■□□ 2.4
NME3-203ENST00000563367 FAXDC2Q96IV6 333 aa30.04■■■□□ 2.4
NME3-203ENST00000563367 GBP4Q96PP9 640 aa30.04■■■□□ 2.4
NME3-203ENST00000563367 SLC22A12Q96S37 553 aa30.04■■■□□ 2.4
NME3-203ENST00000563367 NUP62CLQ9H1M0 184 aa30.04■■■□□ 2.4
NME3-203ENST00000563367 KRT82Q9NSB4 513 aa30.04■■■□□ 2.4
NME3-203ENST00000563367 OBP2AQ9NY56 170 aa30.04■■■□□ 2.4
NME3-203ENST00000563367 RWDD2AQ9UIY3 292 aa30.04■■■□□ 2.4
NME3-203ENST00000563367 CCL26Q9Y258 94 aa30.04■■■□□ 2.4
NME3-203ENST00000563367 F5P12259 2224 aa30.03■■■□□ 2.4
NME3-203ENST00000563367 ARNTLO00327 626 aa30.03■■■□□ 2.4
NME3-203ENST00000563367 ZNF263O14978 683 aa30.03■■■□□ 2.4
NME3-203ENST00000563367 AP1G2O75843 785 aa30.03■■■□□ 2.4
NME3-203ENST00000563367 BEST1O76090 585 aa30.03■■■□□ 2.4
NME3-203ENST00000563367 YAF2Q8IY57 180 aa30.03■■■□□ 2.4
NME3-203ENST00000563367 ZMIZ2Q8NF64 920 aa30.03■■■□□ 2.4
NME3-203ENST00000563367 IRF7Q92985 503 aa30.03■■■□□ 2.4
NME3-203ENST00000563367 USP13Q92995 863 aaPredicted RBP30.03■■■□□ 2.4
NME3-203ENST00000563367 SHDQ96IW2 340 aa30.03■■■□□ 2.4
NME3-203ENST00000563367 CYP2S1Q96SQ9 504 aa30.03■■■□□ 2.4
NME3-203ENST00000563367 SMOQ99835 787 aa30.03■■■□□ 2.4
NME3-203ENST00000563367 DDX23Q9BUQ8 820 aaKnown RBP30.03■■■□□ 2.4
NME3-203ENST00000563367 FOXQ1Q9C009 403 aa30.03■■■□□ 2.4
NME3-203ENST00000563367 KCNH6Q9H252 994 aa30.03■■■□□ 2.4
NME3-203ENST00000563367 TRPC7Q9HCX4 862 aa30.03■■■□□ 2.4
NME3-203ENST00000563367 RFX1P22670 979 aa30.02■■■□□ 2.4
NME3-203ENST00000563367 AVPR1AP37288 418 aa30.02■■■□□ 2.4
NME3-203ENST00000563367 PRKCQQ04759 706 aa30.02■■■□□ 2.4
NME3-203ENST00000563367 TRIM59Q8IWR1 403 aa30.02■■■□□ 2.4
NME3-203ENST00000563367 CELF5Q8N6W0 485 aaKnown RBP30.02■■■□□ 2.4
NME3-203ENST00000563367 DMAP1Q9NPF5 467 aaPredicted RBP30.02■■■□□ 2.4
NME3-203ENST00000563367 TRPV5Q9NQA5 729 aa30.02■■■□□ 2.4
NME3-203ENST00000563367 CISHQ9NSE2 258 aa30.02■■■□□ 2.4
NME3-203ENST00000563367 C2orf78A6NCI8 922 aa30.01■■■□□ 2.39
NME3-203ENST00000563367 SHISA7A6NL88 538 aa30.01■■■□□ 2.39
NME3-203ENST00000563367 CHADO15335 359 aa30.01■■■□□ 2.39
NME3-203ENST00000563367 GNA14O95837 355 aa30.01■■■□□ 2.39
NME3-203ENST00000563367 CD72P21854 359 aa30.01■■■□□ 2.39
NME3-203ENST00000563367 ADORA2BP29275 332 aa30.01■■■□□ 2.39
NME3-203ENST00000563367 MARSP56192 900 aaKnown RBP30.01■■■□□ 2.39
NME3-203ENST00000563367 TAF10Q12962 218 aa30.01■■■□□ 2.39
NME3-203ENST00000563367 ZNF394Q53GI3 561 aa30.01■■■□□ 2.39
NME3-203ENST00000563367 TPRG1Q6ZUI0 275 aa30.01■■■□□ 2.39
NME3-203ENST00000563367 NUP93Q8N1F7 819 aa30.01■■■□□ 2.39
NME3-203ENST00000563367 MLKLQ8NB16 471 aa30.01■■■□□ 2.39
NME3-203ENST00000563367 RIN3Q8TB24 985 aa30.01■■■□□ 2.39
NME3-203ENST00000563367 GPT2Q8TD30 523 aa30.01■■■□□ 2.39
NME3-203ENST00000563367 BPIFB1Q8TDL5 484 aa30.01■■■□□ 2.39
NME3-203ENST00000563367 CYFIP2Q96F07 1278 aa30.01■■■□□ 2.39
NME3-203ENST00000563367 ZFYVE19Q96K21 471 aa30.01■■■□□ 2.39
NME3-203ENST00000563367 HNRNPABQ99729 332 aaKnown RBP30.01■■■□□ 2.39
NME3-203ENST00000563367 TDP1Q9NUW8 608 aa30.01■■■□□ 2.39
NME3-203ENST00000563367 EHD2Q9NZN4 543 aa30.01■■■□□ 2.39
NME3-203ENST00000563367 GCNT4Q9P109 453 aa30.01■■■□□ 2.39
NME3-203ENST00000563367 MYO16Q9Y6X6 1858 aa30■■■□□ 2.39
NME3-203ENST00000563367 TNFRSF10BO14763 440 aa30■■■□□ 2.39
NME3-203ENST00000563367 PMM2O15305 246 aa30■■■□□ 2.39
NME3-203ENST00000563367 IFRD2Q12894 506 aaPredicted RBP30■■■□□ 2.39
NME3-203ENST00000563367 LRMPQ12912 555 aa30■■■□□ 2.39
NME3-203ENST00000563367 SCAMP5Q8TAC9 235 aa30■■■□□ 2.39
NME3-203ENST00000563367 CSNK1G1Q9HCP0 422 aa30■■■□□ 2.39
NME3-203ENST00000563367 TRPM5Q9NZQ8 1165 aa30■■■□□ 2.39
NME3-203ENST00000563367 MTF2Q9Y483 593 aaPredicted RBP30■■■□□ 2.39
NME3-203ENST00000563367 KANSL1LA0AUZ9 987 aa29.99■■■□□ 2.39
NME3-203ENST00000563367 ZNF840PA6NDX5 716 aa29.99■■■□□ 2.39
NME3-203ENST00000563367 MAP3K7CLP57077 242 aa29.99■■■□□ 2.39
NME3-203ENST00000563367 TCF15Q12870 199 aa29.99■■■□□ 2.39
NME3-203ENST00000563367 CUL2Q13617 745 aa29.99■■■□□ 2.39
NME3-203ENST00000563367 ARL14EPQ8N8R7 260 aaPredicted RBP29.99■■■□□ 2.39
NME3-203ENST00000563367 PJA1Q8NG27 643 aa29.99■■■□□ 2.39
NME3-203ENST00000563367 SIT1Q9Y3P8 196 aa29.99■■■□□ 2.39
NME3-203ENST00000563367 TRAV19A0A0A6YYK7 116 aa29.98■■■□□ 2.39
NME3-203ENST00000563367 DCNP07585 359 aaKnown RBP29.98■■■□□ 2.39
NME3-203ENST00000563367 YWHAQP27348 245 aa29.98■■■□□ 2.39
NME3-203ENST00000563367 RAD23BP54727 409 aa29.98■■■□□ 2.39
NME3-203ENST00000563367 KCNH2Q12809 1159 aa29.98■■■□□ 2.39
NME3-203ENST00000563367 DPCR1Q3MIW9 517 aa29.98■■■□□ 2.39
NME3-203ENST00000563367 ARHGAP29Q52LW3 1261 aa29.98■■■□□ 2.39
NME3-203ENST00000563367 SLC4A11Q8NBS3 891 aa29.98■■■□□ 2.39
NME3-203ENST00000563367 LMO3Q8TAP4 145 aa29.98■■■□□ 2.39
NME3-203ENST00000563367 IL37Q9NZH6 218 aa29.98■■■□□ 2.39
NME3-203ENST00000563367 GALR2O43603 387 aaPredicted RBP29.97■■■□□ 2.39
NME3-203ENST00000563367 RTN3O95197 1032 aaPredicted RBP29.97■■■□□ 2.39
NME3-203ENST00000563367 FGFR1OPO95684 399 aaKnown RBP29.97■■■□□ 2.39
NME3-203ENST00000563367 USP17L7P0C7H9 530 aa29.97■■■□□ 2.39
NME3-203ENST00000563367 FAM200BP0CF97 657 aa29.97■■■□□ 2.39
NME3-203ENST00000563367 TRIM21P19474 475 aaKnown RBP29.97■■■□□ 2.39
NME3-203ENST00000563367 NUBP1P53384 320 aa29.97■■■□□ 2.39
NME3-203ENST00000563367 SLC5A3P53794 718 aa29.97■■■□□ 2.39
NME3-203ENST00000563367 ZNF268Q14587 947 aaPredicted RBP29.97■■■□□ 2.39
NME3-203ENST00000563367 PPP1R26Q5T8A7 1209 aaPredicted RBP29.97■■■□□ 2.39
NME3-203ENST00000563367 CLEC20AQ6ZU45 233 aa29.97■■■□□ 2.39
NME3-203ENST00000563367 TTC39CQ8N584 583 aa29.97■■■□□ 2.39
NME3-203ENST00000563367 TMEM176AQ96HP8 235 aa29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms