RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 EHHADHQ08426 723 aa17.83■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 MAPRE1Q15691 268 aaKnown RBP17.83■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 MDH1BQ5I0G3 518 aa17.83■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 SYT13Q7L8C5 426 aa17.83■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 SCFD1Q8WVM8 642 aa17.83■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 LOXL4Q96JB6 756 aa17.83■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 CEP295NLQ96MC4 621 aa17.83■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 CGRRF1Q99675 332 aa17.83■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 C7orf25Q9BPX7 421 aa17.83■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 TTLL2Q9BWV7 592 aa17.83■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 DPEP3Q9H4B8 488 aa17.83■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 RXFP3Q9NSD7 469 aa17.83■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 TMEM30AQ9NV96 361 aa17.83■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 ZFHX4Q86UP3 3567 aa17.83■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 ATG2BQ96BY7 2078 aa17.83■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 F8VP50 259 aa17.82■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 CUTAO60888 179 aa17.82■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 TACC1O75410 805 aa17.82■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 AKAP3O75969 853 aa17.82■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 YEATS4O95619 227 aa17.82■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 TNNI1P19237 187 aa17.82■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 ANXA13P27216 316 aa17.82■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 CYP2J2P51589 502 aa17.82■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 CACNA2D1P54289 1103 aa17.82■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 NOP14P78316 857 aaKnown RBP17.82■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 PSMD6Q15008 389 aa17.82■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 NELFCDQ8IXH7 590 aa17.82■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 IQUBQ8NA54 791 aa17.82■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 ZNF516Q92618 1163 aa17.82■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 EXOC4Q96A65 974 aa17.82■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 CCDC127Q96BQ5 260 aa17.82■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 ZC3H10Q96K80 434 aaKnown RBP17.82■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 UBE4BO95155 1302 aa17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 ZNF840PA6NDX5 716 aa17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 ANTXRLA6NF34 631 aa17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 LEFTY2O00292 366 aa17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 TRIM66O15016 1216 aa17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 OLFM2O95897 454 aa17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 ZNF806P0C7X5 589 aa17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 GNL1P36915 607 aaPredicted RBP17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 PDE6CP51160 858 aa17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 PSMD2Q13200 908 aa17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 DMC1Q14565 340 aa17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 GAB4Q2WGN9 574 aa17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 WDR72Q3MJ13 1102 aa17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 AASDHQ4L235 1098 aaPredicted RBP17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 PLA2G2CQ5R387 149 aa17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 UNC13DQ70J99 1090 aa17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 HS2ST1Q7LGA3 356 aa17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 XXYLT1Q8NBI6 393 aa17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 OR6B3Q8NGW1 331 aa17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 C8orf48Q96LL4 319 aa17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 ZNF396Q96N95 335 aaPredicted RBP17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 FNBP1Q96RU3 617 aa17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 RNF38Q9H0F5 515 aa17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 BLZF1Q9H2G9 400 aa17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 SNX25Q9H3E2 840 aa17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 SMOC1Q9H4F8 434 aa17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 TRPM5Q9NZQ8 1165 aa17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 KMT2BQ9UMN6 2715 aaPredicted RBP17.81■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 POLR2DO15514 142 aaKnown RBP17.8■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 NFATC1O95644 943 aa17.8■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 PFKLP17858 780 aa17.8■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 OPRD1P41143 372 aa17.8■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 LIMK1P53667 647 aa17.8■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 SLC7A9P82251 487 aa17.8■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 NR1H3Q13133 447 aa17.8■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 BMT2Q1RMZ1 405 aa17.8■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 PLK5Q496M5 336 aa17.8■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 C12orf50Q8NA57 414 aaPredicted RBP17.8■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 ACDQ96AP0 544 aa17.8■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 BACH2Q9BYV9 841 aa17.8■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 ZNF518BQ9C0D4 1074 aa17.8■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 XYLT2Q9H1B5 865 aa17.8■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 DUSP15Q9H1R2 295 aaPredicted RBP17.8■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 EBF1Q9UH73 591 aa17.8■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 SPTBN2O15020 2390 aa17.8■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 K7EQS6 105 aa17.79■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 DCLK1O15075 740 aa17.79■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 APBB3O95704 486 aa17.79■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 OAS1P00973 400 aaKnown RBP17.79■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 PTPN1P18031 435 aaKnown RBP17.79■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 MPLP40238 635 aa17.79■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 MYL6P60660 151 aa17.79■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 SNRPFP62306 86 aaKnown RBP17.79■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 TNNC1P63316 161 aa17.79■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 TAF10Q12962 218 aa17.79■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 FOXD4L5Q5VV16 416 aaPredicted RBP17.79■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 FILIP1Q7Z7B0 1213 aa17.79■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 PLEKHO2Q8TD55 490 aa17.79■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 FOXD4L4Q8WXT5 416 aaPredicted RBP17.79■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 MAGEF1Q9HAY2 307 aa17.79■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 SLC39A2Q9NP94 309 aa17.79■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 EHD2Q9NZN4 543 aa17.79■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 PCDHGA5Q9Y5G8 931 aa17.79■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 CPQQ9Y646 472 aa17.79■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 SPAG17Q6Q759 2223 aa17.79■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 CLDN5O00501 218 aa17.78■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 SCAMP3O14828 347 aaKnown RBP17.78■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 TM4SF5O14894 197 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms