RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 SOX5P35711 763 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 ADKP55263 362 aaKnown RBP12.34□□□□□ -0.43
HERC1-214ENST00000561400 TRIM14Q14142 442 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 PLPP4Q5VZY2 271 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 PDXDC1Q6P996 788 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 LRRTM3Q86VH5 581 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 GLYCTKQ8IVS8 523 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 CRYBG2Q8N1P7 616 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 TTC39CQ8N584 583 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 C12orf29Q8N999 325 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 TMEM176AQ96HP8 235 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 CRTAC1Q9NQ79 661 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 ENTPD7Q9NQZ7 604 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 SPATA7Q9P0W8 599 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 GTF3C4Q9UKN8 822 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 TMEM98Q9Y2Y6 226 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 CDY1Q9Y6F8 540 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 PLXNA3P51805 1871 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 MYBPHLA2RUH7 354 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 H7C4K7 107 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 FSCN2O14926 492 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 POLR3GO15318 223 aaPredicted RBP12.33□□□□□ -0.44
HERC1-214ENST00000561400 H2AFXP16104 143 aaPredicted RBP12.33□□□□□ -0.44
HERC1-214ENST00000561400 PTPN1P18031 435 aaKnown RBP12.33□□□□□ -0.44
HERC1-214ENST00000561400 PCSK1P29120 753 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 OR1D2P34982 312 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 STAT1P42224 750 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 DEUP1Q05D60 604 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 GPR65Q8IYL9 337 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 MRPL43Q8N983 215 aaKnown RBP12.33□□□□□ -0.44
HERC1-214ENST00000561400 B3GALNT2Q8NCR0 500 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 PKMYT1Q99640 499 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 SYT15Q9BQS2 421 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 ZSWIM1Q9BR11 485 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 TMLHEQ9NVH6 421 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 CDH9Q9ULB4 789 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 MYO6Q9UM54 1294 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 BACE2Q9Y5Z0 518 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 IRAK3Q9Y616 596 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 PRRC2BQ5JSZ5 2229 aaKnown RBP12.33□□□□□ -0.44
HERC1-214ENST00000561400 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.33□□□□□ -0.44
HERC1-214ENST00000561400 C2orf71A6NGG8 1288 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 MFAP3LO75121 409 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 CNPP09543 421 aaKnown RBP12.33□□□□□ -0.44
HERC1-214ENST00000561400 CCDC175P0C221 793 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 CA8P35219 290 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 ARID5AQ03989 594 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 INTS6LQ5JSJ4 861 aaKnown RBP12.33□□□□□ -0.44
HERC1-214ENST00000561400 SLC8B1Q6J4K2 584 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 FAM171BQ6P995 826 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 IRF2BP2Q7Z5L9 587 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 SLC47A2Q86VL8 602 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 TFAP2BQ92481 460 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 DHRS1Q96LJ7 313 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 RMDN2Q96LZ7 410 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 ZCWPW1Q9H0M4 648 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 RXFP1Q9HBX9 757 aa12.33□□□□□ -0.44
HERC1-214ENST00000561400 OR6C75A6NL08 312 aa12.32□□□□□ -0.44
HERC1-214ENST00000561400 TEX28O15482 410 aa12.32□□□□□ -0.44
HERC1-214ENST00000561400 ARPP19P56211 112 aa12.32□□□□□ -0.44
HERC1-214ENST00000561400 TMED1Q13445 227 aa12.32□□□□□ -0.44
HERC1-214ENST00000561400 SMC1AQ14683 1233 aaKnown RBP12.32□□□□□ -0.44
HERC1-214ENST00000561400 GRIN2CQ14957 1233 aa12.32□□□□□ -0.44
HERC1-214ENST00000561400 TC2NQ8N9U0 490 aa12.32□□□□□ -0.44
HERC1-214ENST00000561400 TNIP3Q96KP6 325 aa12.32□□□□□ -0.44
HERC1-214ENST00000561400 HEXIM2Q96MH2 286 aaKnown RBP12.32□□□□□ -0.44
HERC1-214ENST00000561400 NGRNQ9NPE2 291 aaKnown RBP12.32□□□□□ -0.44
HERC1-214ENST00000561400 AIPL1Q9NZN9 384 aa12.32□□□□□ -0.44
HERC1-214ENST00000561400 FNIP2Q9P278 1114 aa12.32□□□□□ -0.44
HERC1-214ENST00000561400 MTCL1Q9Y4B5 1905 aaKnown RBP12.32□□□□□ -0.44
HERC1-214ENST00000561400 TMEM265A0A087WTH1 108 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 WDR27A2RRH5 827 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 AKR1B15C9JRZ8 316 aaPredicted RBP12.31□□□□□ -0.44
HERC1-214ENST00000561400 PAEPP09466 180 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 VDRP11473 427 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 STIP1P31948 543 aaKnown RBP12.31□□□□□ -0.44
HERC1-214ENST00000561400 SESN3P58005 492 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 TSPY1Q01534 308 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 ROR1Q01973 937 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 ARID5BQ14865 1188 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 MDH1BQ5I0G3 518 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 PCED1BQ96HM7 432 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 DNAJC7Q99615 494 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 NACA2Q9H009 215 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 PRDM12Q9H4Q4 367 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 TRPV5Q9NQA5 729 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.31□□□□□ -0.44
HERC1-214ENST00000561400 FAM49BQ9NUQ9 324 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 IMPACTQ9P2X3 320 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 SSX2IPQ9Y2D8 614 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 VNN2O95498 520 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 CCDC130P13994 396 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 CPB1P15086 417 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 CD19P15391 556 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 GNA15P30679 374 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 PTK2Q05397 1052 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 USP4Q13107 963 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 SLC39A12Q504Y0 691 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 PPP1R26Q5T8A7 1209 aaPredicted RBP12.31□□□□□ -0.44
HERC1-214ENST00000561400 SMYD5Q6GMV2 418 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms