RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 BEST1O76090 585 aa21.11■□□□□ 0.97
TSPAN3-210ENST00000561277 PRAMEF12O95522 483 aa21.11■□□□□ 0.97
TSPAN3-210ENST00000561277 RAD23BP54727 409 aa21.11■□□□□ 0.97
TSPAN3-210ENST00000561277 YWHAEP62258 255 aaKnown RBP21.11■□□□□ 0.97
TSPAN3-210ENST00000561277 STX1AQ16623 288 aa21.11■□□□□ 0.97
TSPAN3-210ENST00000561277 CT47A1Q5JQC4 288 aaPredicted RBP21.11■□□□□ 0.97
TSPAN3-210ENST00000561277 PPP1R26Q5T8A7 1209 aaPredicted RBP21.11■□□□□ 0.97
TSPAN3-210ENST00000561277 C11orf57Q6ZUT1 292 aaPredicted RBP21.11■□□□□ 0.97
TSPAN3-210ENST00000561277 RRAGAQ7L523 313 aa21.11■□□□□ 0.97
TSPAN3-210ENST00000561277 ARHGEF19Q8IW93 802 aa21.11■□□□□ 0.97
TSPAN3-210ENST00000561277 SIX5Q8N196 739 aa21.11■□□□□ 0.97
TSPAN3-210ENST00000561277 NUP93Q8N1F7 819 aa21.11■□□□□ 0.97
TSPAN3-210ENST00000561277 EHBP1Q8NDI1 1231 aa21.11■□□□□ 0.97
TSPAN3-210ENST00000561277 JAKMIP2Q96AA8 810 aa21.11■□□□□ 0.97
TSPAN3-210ENST00000561277 RSPRY1Q96DX4 576 aa21.11■□□□□ 0.97
TSPAN3-210ENST00000561277 HNRNPABQ99729 332 aaKnown RBP21.11■□□□□ 0.97
TSPAN3-210ENST00000561277 SAMSN1Q9NSI8 373 aaKnown RBP21.11■□□□□ 0.97
TSPAN3-210ENST00000561277 EHD2Q9NZN4 543 aa21.11■□□□□ 0.97
TSPAN3-210ENST00000561277 NFE2L3Q9Y4A8 694 aa21.11■□□□□ 0.97
TSPAN3-210ENST00000561277 NUP210Q8TEM1 1887 aaPredicted RBP21.11■□□□□ 0.97
TSPAN3-210ENST00000561277 HEPACAM2A8MVW5 462 aa21.1■□□□□ 0.97
TSPAN3-210ENST00000561277 DPYSL4O14531 572 aa21.1■□□□□ 0.97
TSPAN3-210ENST00000561277 AVPR1AP37288 418 aa21.1■□□□□ 0.97
TSPAN3-210ENST00000561277 SLC5A3P53794 718 aa21.1■□□□□ 0.97
TSPAN3-210ENST00000561277 ZMIZ2Q8NF64 920 aa21.1■□□□□ 0.97
TSPAN3-210ENST00000561277 TTLL2Q9BWV7 592 aa21.1■□□□□ 0.97
TSPAN3-210ENST00000561277 MFSD1Q9H3U5 465 aa21.1■□□□□ 0.97
TSPAN3-210ENST00000561277 FAM124BQ9H5Z6 455 aaPredicted RBP21.1■□□□□ 0.97
TSPAN3-210ENST00000561277 SLC2A4RGQ9NR83 387 aa21.1■□□□□ 0.97
TSPAN3-210ENST00000561277 DENND4CQ5VZ89 1909 aa21.1■□□□□ 0.97
TSPAN3-210ENST00000561277 MYH10P35580 1976 aa21.1■□□□□ 0.97
TSPAN3-210ENST00000561277 PRKCSHP14314 528 aaPredicted RBP21.1■□□□□ 0.97
TSPAN3-210ENST00000561277 DDX6P26196 483 aaKnown RBP eCLIP21.1■□□□□ 0.972e-10■■□□□ 13.4
TSPAN3-210ENST00000561277 MAN2A1Q16706 1144 aa21.1■□□□□ 0.97
TSPAN3-210ENST00000561277 CMTM8Q8IZV2 173 aa21.1■□□□□ 0.97
TSPAN3-210ENST00000561277 SCAMP5Q8TAC9 235 aa21.1■□□□□ 0.97
TSPAN3-210ENST00000561277 CSNK1G1Q9HCP0 422 aa21.1■□□□□ 0.97
TSPAN3-210ENST00000561277 KCNJ18B7U540 433 aa21.09■□□□□ 0.97
TSPAN3-210ENST00000561277 ABL1P00519 1130 aa21.09■□□□□ 0.97
TSPAN3-210ENST00000561277 PSMC3P17980 439 aa21.09■□□□□ 0.97
TSPAN3-210ENST00000561277 YWHAQP27348 245 aa21.09■□□□□ 0.97
TSPAN3-210ENST00000561277 TAF10Q12962 218 aa21.09■□□□□ 0.97
TSPAN3-210ENST00000561277 KCNJ12Q14500 433 aa21.09■□□□□ 0.97
TSPAN3-210ENST00000561277 TMEM270Q6UE05 265 aa21.09■□□□□ 0.97
TSPAN3-210ENST00000561277 CLEC20AQ6ZU45 233 aa21.09■□□□□ 0.97
TSPAN3-210ENST00000561277 MON1AQ86VX9 555 aa21.09■□□□□ 0.97
TSPAN3-210ENST00000561277 UBR7Q8N806 425 aa21.09■□□□□ 0.97
TSPAN3-210ENST00000561277 ENOX1Q8TC92 643 aaKnown RBP21.09■□□□□ 0.97
TSPAN3-210ENST00000561277 DEPDC1BQ8WUY9 529 aa21.09■□□□□ 0.97
TSPAN3-210ENST00000561277 SLITRK1Q96PX8 696 aa21.09■□□□□ 0.97
TSPAN3-210ENST00000561277 TUBGCP2Q9BSJ2 902 aa21.09■□□□□ 0.97
TSPAN3-210ENST00000561277 TRMT61BQ9BVS5 477 aaKnown RBP21.09■□□□□ 0.97
TSPAN3-210ENST00000561277 BRD9Q9H8M2 597 aa21.09■□□□□ 0.97
TSPAN3-210ENST00000561277 TRPM5Q9NZQ8 1165 aa21.09■□□□□ 0.97
TSPAN3-210ENST00000561277 WNT16Q9UBV4 365 aa21.09■□□□□ 0.97
TSPAN3-210ENST00000561277 PCDHB4Q9Y5E5 795 aa21.09■□□□□ 0.97
TSPAN3-210ENST00000561277 KRBA1A5PL33 1030 aa21.08■□□□□ 0.97
TSPAN3-210ENST00000561277 C2orf78A6NCI8 922 aa21.08■□□□□ 0.97
TSPAN3-210ENST00000561277 PES1O00541 588 aaKnown RBP21.08■□□□□ 0.97
TSPAN3-210ENST00000561277 TNFRSF10BO14763 440 aa21.08■□□□□ 0.97
TSPAN3-210ENST00000561277 RTN3O95197 1032 aaPredicted RBP21.08■□□□□ 0.97
TSPAN3-210ENST00000561277 CKMP06732 381 aa21.08■□□□□ 0.97
TSPAN3-210ENST00000561277 CD19P15391 556 aa21.08■□□□□ 0.97
TSPAN3-210ENST00000561277 NPR3P17342 541 aa21.08■□□□□ 0.97
TSPAN3-210ENST00000561277 GDI1P31150 447 aa21.08■□□□□ 0.97
TSPAN3-210ENST00000561277 TYRO3Q06418 890 aa21.08■□□□□ 0.97
TSPAN3-210ENST00000561277 IER5LQ5T953 404 aa21.08■□□□□ 0.97
TSPAN3-210ENST00000561277 BMP8AQ7Z5Y6 402 aa21.08■□□□□ 0.97
TSPAN3-210ENST00000561277 MFSD6LQ8IWD5 586 aa21.08■□□□□ 0.97
TSPAN3-210ENST00000561277 SUGP1Q8IWZ8 645 aaKnown RBP21.08■□□□□ 0.97
TSPAN3-210ENST00000561277 YAF2Q8IY57 180 aa21.08■□□□□ 0.97
TSPAN3-210ENST00000561277 TTC16Q8NEE8 873 aa21.08■□□□□ 0.97
TSPAN3-210ENST00000561277 FLCNQ8NFG4 579 aa21.08■□□□□ 0.97
TSPAN3-210ENST00000561277 FBXO32Q969P5 355 aa21.08■□□□□ 0.97
TSPAN3-210ENST00000561277 E2F7Q96AV8 911 aa21.08■□□□□ 0.97
TSPAN3-210ENST00000561277 ARHGEF3Q9NR81 526 aa21.08■□□□□ 0.97
TSPAN3-210ENST00000561277 ZMYM5Q9UJ78 669 aa21.08■□□□□ 0.97
TSPAN3-210ENST00000561277 ZNF638Q14966 1978 aaKnown RBP21.08■□□□□ 0.96
TSPAN3-210ENST00000561277 SLC9A1P19634 815 aa21.07■□□□□ 0.96
TSPAN3-210ENST00000561277 PFKPQ01813 784 aa21.07■□□□□ 0.96
TSPAN3-210ENST00000561277 GCNT1Q02742 428 aa21.07■□□□□ 0.96
TSPAN3-210ENST00000561277 PHLDB3Q6NSJ2 640 aa21.07■□□□□ 0.96
TSPAN3-210ENST00000561277 TRIM65Q6PJ69 517 aa21.07■□□□□ 0.96
TSPAN3-210ENST00000561277 GBP6Q6ZN66 633 aa21.07■□□□□ 0.96
TSPAN3-210ENST00000561277 GPRIN1Q7Z2K8 1008 aa21.07■□□□□ 0.96
TSPAN3-210ENST00000561277 SLC22A12Q96S37 553 aa21.07■□□□□ 0.96
TSPAN3-210ENST00000561277 CYP2S1Q96SQ9 504 aa21.07■□□□□ 0.96
TSPAN3-210ENST00000561277 CCL26Q9Y258 94 aa21.07■□□□□ 0.96
TSPAN3-210ENST00000561277 TRAV19A0A0A6YYK7 116 aa21.06■□□□□ 0.96
TSPAN3-210ENST00000561277 ZNF840PA6NDX5 716 aa21.06■□□□□ 0.96
TSPAN3-210ENST00000561277 ACO1P21399 889 aaKnown RBP21.06■□□□□ 0.96
TSPAN3-210ENST00000561277 RFX1P22670 979 aa21.06■□□□□ 0.96
TSPAN3-210ENST00000561277 APBA1Q02410 837 aa21.06■□□□□ 0.96
TSPAN3-210ENST00000561277 EXOC3L4Q17RC7 722 aa21.06■□□□□ 0.96
TSPAN3-210ENST00000561277 GOLGA7BQ2TAP0 167 aa21.06■□□□□ 0.96
TSPAN3-210ENST00000561277 VWA3BQ502W6 1294 aa21.06■□□□□ 0.96
TSPAN3-210ENST00000561277 TCP11X2Q5H9J9 407 aa21.06■□□□□ 0.96
TSPAN3-210ENST00000561277 FBXL6Q8N531 539 aa21.06■□□□□ 0.96
TSPAN3-210ENST00000561277 ARL14EPQ8N8R7 260 aaPredicted RBP21.06■□□□□ 0.96
TSPAN3-210ENST00000561277 USP13Q92995 863 aaPredicted RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms