RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 GPR15P49685 360 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 TFAMQ00059 246 aaKnown RBP11.48□□□□□ -0.57
TPM1-227ENST00000560970 AMPD2Q01433 879 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 MTF1Q14872 753 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 PDGFRLQ15198 375 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 NFKBIBQ15653 356 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 INTS6LQ5JSJ4 861 aaKnown RBP11.48□□□□□ -0.57
TPM1-227ENST00000560970 IL31Q6EBC2 164 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 ISM2Q6H9L7 571 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 CACNA2D4Q7Z3S7 1137 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 LRRTM3Q86VH5 581 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 ELOA2Q8IYF1 753 aaPredicted RBP11.48□□□□□ -0.57
TPM1-227ENST00000560970 PDCL2Q8N4E4 241 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 LRRC52Q8N7C0 313 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 RIN3Q8TB24 985 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 SPATA18Q8TC71 538 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 SMARCE1Q969G3 411 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 EXOC4Q96A65 974 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 CCDC34Q96HJ3 373 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 GSDMAQ96QA5 445 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 GKN1Q9NS71 199 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 CGNQ9P2M7 1197 aaKnown RBP11.48□□□□□ -0.57
TPM1-227ENST00000560970 SIX4Q9UIU6 781 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 MAGED2Q9UNF1 606 aaPredicted RBP11.48□□□□□ -0.57
TPM1-227ENST00000560970 SLC8A2Q9UPR5 921 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 TRAF3IP3Q9Y228 551 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 PCDHGA5Q9Y5G8 931 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 CNOT1A5YKK6 2376 aaKnown RBP11.48□□□□□ -0.57
TPM1-227ENST00000560970 OTOL1A6NHN0 477 aaPredicted RBP11.47□□□□□ -0.57
TPM1-227ENST00000560970 PDXKO00764 312 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 SMC2O95347 1197 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 EGFP01133 1207 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 CKMP06732 381 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 ARSAP15289 507 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 CD44P16070 742 aaKnown RBP11.47□□□□□ -0.57
TPM1-227ENST00000560970 DRD1P21728 446 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 BMP6P22004 513 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 HOXC13P31276 330 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 RAP1GAPP47736 663 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 PMS1P54277 932 aaKnown RBP11.47□□□□□ -0.57
TPM1-227ENST00000560970 RPL10AP62906 217 aaKnown RBP11.47□□□□□ -0.57
TPM1-227ENST00000560970 MYL7Q01449 175 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 PSMD6Q15008 389 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 SF3A2Q15428 464 aaKnown RBP11.47□□□□□ -0.57
TPM1-227ENST00000560970 ZNF77Q15935 545 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 ST3GAL2Q16842 350 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 FBXO43Q4G163 708 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 COBLL1Q53SF7 1204 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 ZNF658Q5TYW1 1059 aaPredicted RBP11.47□□□□□ -0.57
TPM1-227ENST00000560970 TXNDC8Q6A555 127 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 KBTBD6Q86V97 674 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 MON1AQ86VX9 555 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 SLC9A9Q8IVB4 645 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 ADGRF2Q8IZF7 708 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 TMEM86AQ8N2M4 240 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 GOLGA5Q8TBA6 731 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 TMEM174Q8WUU8 243 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 ATP2A3Q93084 1043 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 ACDQ96AP0 544 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 HHIPQ96QV1 700 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 CGRRF1Q99675 332 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 PI4K2AQ9BTU6 479 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 ARRDC1-AS1Q9H2J1 176 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 KIAA1586Q9HCI6 787 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 LMBRD1Q9NUN5 540 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 TMLHEQ9NVH6 421 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 INTS13Q9NVM9 706 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 RMND1Q9NWS8 449 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 DDX43Q9NXZ2 648 aaKnown RBP11.47□□□□□ -0.57
TPM1-227ENST00000560970 ITGA11Q9UKX5 1188 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 L1RE1Q9UN81 338 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 MYOFQ9NZM1 2061 aa11.47□□□□□ -0.57
TPM1-227ENST00000560970 FRYQ5TBA9 3013 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 CEP295Q9C0D2 2601 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 TRAV19A0A0A6YYK7 116 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 TRIM49BA6NDI0 452 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 LRRIQ3A6PVS8 624 aaPredicted RBP11.46□□□□□ -0.57
TPM1-227ENST00000560970 EXOC3O60645 756 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 HUS1O60921 280 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 KRT37O76014 449 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 TMEM191BP0C7N4 346 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 ZNF806P0C7X5 589 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 DLATP10515 647 aaKnown RBP11.46□□□□□ -0.57
TPM1-227ENST00000560970 ACAT1P24752 427 aaKnown RBP11.46□□□□□ -0.57
TPM1-227ENST00000560970 MPLP40238 635 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 IFNAR2P48551 515 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 PXNP49023 591 aaPredicted RBP11.46□□□□□ -0.57
TPM1-227ENST00000560970 CCDC6Q16204 474 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 CAMK4Q16566 473 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 NFIL3Q16649 462 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 CFAP221Q4G0U5 840 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 WDR49Q8IV35 697 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 CAMKK1Q8N5S9 505 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 ZNF516Q92618 1163 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 CCDC127Q96BQ5 260 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 FUBP3Q96I24 572 aaKnown RBP eCLIP11.46□□□□□ -0.57
TPM1-227ENST00000560970 ANKRD36BP1Q96IX9 119 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 MYRFLQ96LU7 910 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 PKMYT1Q99640 499 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 P2RY13Q9BPV8 354 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms