RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 ACOT2P49753 483 aa10.65□□□□□ -0.7
TPM1-225ENST00000560679 TSPY1Q01534 308 aa10.65□□□□□ -0.7
TPM1-225ENST00000560679 GFPT1Q06210 699 aaPredicted RBP10.65□□□□□ -0.7
TPM1-225ENST00000560679 NR1H3Q13133 447 aa10.65□□□□□ -0.7
TPM1-225ENST00000560679 KCNB1Q14721 858 aa10.65□□□□□ -0.7
TPM1-225ENST00000560679 NFE2Q16621 373 aaPredicted RBP10.65□□□□□ -0.7
TPM1-225ENST00000560679 DUOXA1Q1HG43 343 aa10.65□□□□□ -0.7
TPM1-225ENST00000560679 EMC10Q5UCC4 262 aa10.65□□□□□ -0.7
TPM1-225ENST00000560679 LMBRD2Q68DH5 695 aaPredicted RBP10.65□□□□□ -0.7
TPM1-225ENST00000560679 HSCBQ8IWL3 235 aa10.65□□□□□ -0.7
TPM1-225ENST00000560679 CD302Q8IX05 232 aa10.65□□□□□ -0.7
TPM1-225ENST00000560679 PDCL2Q8N4E4 241 aa10.65□□□□□ -0.7
TPM1-225ENST00000560679 PNPLA1Q8N8W4 532 aa10.65□□□□□ -0.7
TPM1-225ENST00000560679 SYT2Q8N9I0 419 aaPredicted RBP10.65□□□□□ -0.7
TPM1-225ENST00000560679 HNRNPLLQ8WVV9 542 aaKnown RBP10.65□□□□□ -0.7
TPM1-225ENST00000560679 SNX21Q969T3 373 aa10.65□□□□□ -0.7
TPM1-225ENST00000560679 C8orf76Q96K31 380 aa10.65□□□□□ -0.7
TPM1-225ENST00000560679 CCDC86Q9H6F5 360 aaKnown RBP10.65□□□□□ -0.7
TPM1-225ENST00000560679 DPP3Q9NY33 737 aa10.65□□□□□ -0.7
TPM1-225ENST00000560679 CACNA2D2Q9NY47 1150 aa10.65□□□□□ -0.7
TPM1-225ENST00000560679 BCCIPQ9P287 314 aaKnown RBP eCLIP10.65□□□□□ -0.7
TPM1-225ENST00000560679 L1RE1Q9UN81 338 aa10.65□□□□□ -0.7
TPM1-225ENST00000560679 STK24Q9Y6E0 443 aa10.65□□□□□ -0.7
TPM1-225ENST00000560679 MYOFQ9NZM1 2061 aa10.65□□□□□ -0.7
TPM1-225ENST00000560679 KPNA7A9QM74 516 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 ANKRD63C9JTQ0 380 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 H0YCG3 227 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 K7ENM7 598 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 ARHGAP33O14559 1287 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 KAT7O95251 611 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 PLA2G4BP0C869 781 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 DPP6P42658 865 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 ATXN3P54252 364 aaPredicted RBP10.64□□□□□ -0.71
TPM1-225ENST00000560679 WNT7BP56706 349 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 RPL10AP62906 217 aaKnown RBP10.64□□□□□ -0.71
TPM1-225ENST00000560679 RPL6Q02878 288 aaKnown RBP10.64□□□□□ -0.71
TPM1-225ENST00000560679 KDSRQ06136 332 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 ZRSR1Q15695 479 aaKnown RBP10.64□□□□□ -0.71
TPM1-225ENST00000560679 SV2CQ496J9 727 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 HSF5Q4G112 596 aaPredicted RBP10.64□□□□□ -0.71
TPM1-225ENST00000560679 INTS6LQ5JSJ4 861 aaKnown RBP10.64□□□□□ -0.71
TPM1-225ENST00000560679 FILIP1Q7Z7B0 1213 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 OSTM1Q86WC4 334 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 SLC41A1Q8IVJ1 513 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 CEP76Q8TAP6 659 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 SPATA18Q8TC71 538 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 CRELD1Q96HD1 420 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 FIZ1Q96SL8 496 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 PLIN2Q99541 437 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 REEP2Q9BRK0 252 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 RAB34Q9BZG1 259 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 IKZF4Q9H2S9 585 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 ASB7Q9H672 318 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 SCUBE2Q9NQ36 999 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 LARSQ9P2J5 1176 aaKnown RBP10.64□□□□□ -0.71
TPM1-225ENST00000560679 KCNG1Q9UIX4 513 aa10.64□□□□□ -0.71
TPM1-225ENST00000560679 MYO18AQ92614 2054 aaKnown RBP10.63□□□□□ -0.71
TPM1-225ENST00000560679 IGHV1OR15-9A0A0B4J2B8 117 aa10.63□□□□□ -0.71
TPM1-225ENST00000560679 AP5Z1O43299 807 aa10.63□□□□□ -0.71
TPM1-225ENST00000560679 GABRG2P18507 467 aa10.63□□□□□ -0.71
TPM1-225ENST00000560679 HDCP19113 662 aa10.63□□□□□ -0.71
TPM1-225ENST00000560679 RDXP35241 583 aaKnown RBP10.63□□□□□ -0.71
TPM1-225ENST00000560679 EIF2DP41214 584 aaKnown RBP10.63□□□□□ -0.71
TPM1-225ENST00000560679 ZNF131P52739 623 aa10.63□□□□□ -0.71
TPM1-225ENST00000560679 ANAPC15P60006 121 aa10.63□□□□□ -0.71
TPM1-225ENST00000560679 USP46P62068 366 aa10.63□□□□□ -0.71
TPM1-225ENST00000560679 RESTQ13127 1097 aa10.63□□□□□ -0.71
TPM1-225ENST00000560679 HNRNPDQ14103 355 aaKnown RBP10.63□□□□□ -0.71
TPM1-225ENST00000560679 DHCR24Q15392 516 aa10.63□□□□□ -0.71
TPM1-225ENST00000560679 TRIP6Q15654 476 aaKnown RBP10.63□□□□□ -0.71
TPM1-225ENST00000560679 CFAP221Q4G0U5 840 aa10.63□□□□□ -0.71
TPM1-225ENST00000560679 TMEM119Q4V9L6 283 aa10.63□□□□□ -0.71
TPM1-225ENST00000560679 EOGTQ5NDL2 527 aa10.63□□□□□ -0.71
TPM1-225ENST00000560679 CRELD2Q6UXH1 353 aaPredicted RBP10.63□□□□□ -0.71
TPM1-225ENST00000560679 NAXDQ8IW45 347 aa10.63□□□□□ -0.71
TPM1-225ENST00000560679 FBXO18Q8NFZ0 1043 aa10.63□□□□□ -0.71
TPM1-225ENST00000560679 CXorf38Q8TB03 319 aa10.63□□□□□ -0.71
TPM1-225ENST00000560679 LRIG1Q96JA1 1093 aa10.63□□□□□ -0.71
TPM1-225ENST00000560679 FAM84AQ96KN4 292 aa10.63□□□□□ -0.71
TPM1-225ENST00000560679 PNKPQ96T60 521 aa10.63□□□□□ -0.71
TPM1-225ENST00000560679 ACBD6Q9BR61 282 aa10.63□□□□□ -0.71
TPM1-225ENST00000560679 CD248Q9HCU0 757 aa10.63□□□□□ -0.71
TPM1-225ENST00000560679 POLMQ9NP87 494 aaPredicted RBP10.63□□□□□ -0.71
TPM1-225ENST00000560679 DDX43Q9NXZ2 648 aaKnown RBP10.63□□□□□ -0.71
TPM1-225ENST00000560679 KCND2Q9NZV8 630 aa10.63□□□□□ -0.71
TPM1-225ENST00000560679 CALCOCO1Q9P1Z2 691 aa10.63□□□□□ -0.71
TPM1-225ENST00000560679 GTF3C4Q9UKN8 822 aa10.63□□□□□ -0.71
TPM1-225ENST00000560679 HCN2Q9UL51 889 aa10.63□□□□□ -0.71
TPM1-225ENST00000560679 A0A0A0MRY4 1105 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 CBFA2T3O75081 653 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 C1QL1O75973 258 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 OLFM2O95897 454 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 APODP05090 189 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 POLR2BP30876 1174 aaKnown RBP10.62□□□□□ -0.71
TPM1-225ENST00000560679 PRPHP41219 470 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 SLC7A9P82251 487 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 ATP2C1P98194 919 aaPredicted RBP10.62□□□□□ -0.71
TPM1-225ENST00000560679 ZNF33AQ06730 810 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 NFKBIBQ15653 356 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 RHBDF2Q6PJF5 856 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms