RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 WARSP23381 471 aaKnown RBP11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 PRMT2P55345 433 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 DYNLT1P63172 113 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 DR1Q01658 176 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 BST2Q10589 180 aaKnown RBP11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 PIGHQ14442 188 aaPredicted RBP11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 CASP8Q14790 479 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 SCYL2Q6P3W7 929 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 OLFML1Q6UWY5 402 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 LIMS2Q7Z4I7 341 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 CCDC105Q8IYK2 499 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 TTC39CQ8N584 583 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 KHSRPQ92945 711 aaKnown RBP eCLIP11.44□□□□□ -0.581e-8■■■□□ 16
SNRPA1-211ENST00000560433 PCED1BQ96HM7 432 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 TNIP3Q96KP6 325 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 NAP1L3Q99457 506 aaPredicted RBP11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 ADAM33Q9BZ11 813 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 GDF3Q9NR23 364 aa11.44□□□□□ -0.58
SNRPA1-211ENST00000560433 GABRDO14764 452 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 PSTPIP1O43586 416 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 MIPP30301 263 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 PLA2G4AP47712 749 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 OR1G1P47890 313 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 RNASELQ05823 741 aaKnown RBP11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 GLE1Q53GS7 698 aaKnown RBP11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 ODF2Q5BJF6 829 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 ARHGAP17Q68EM7 881 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 PIGZQ86VD9 579 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 IFT20Q8IY31 132 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 PEBP4Q96S96 227 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 SYT15Q9BQS2 421 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 TRAIPQ9BWF2 469 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 SLC4A5Q9BY07 1137 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 OSBPL8Q9BZF1 889 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 NGRNQ9NPE2 291 aaKnown RBP11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 SYNJ2BP-COX16A0A087WUM0 186 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 PHF2O75151 1096 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 OR4Q2P0C623 313 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 CYP2C18P33260 490 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 BCAT1P54687 386 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 FAM193AP78312 1265 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 SLC25A11Q02978 314 aaKnown RBP11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 ADIGQ0VDE8 80 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 GRIK3Q13003 919 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 TUSC3Q13454 348 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 CCDC14Q49A88 953 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 B4GALNT4Q76KP1 1039 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 MTERF4Q7Z6M4 381 aaKnown RBP11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 TMEM110Q86TL2 294 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 CCDC26Q8TAB7 109 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 B3GALT6Q96L58 329 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 SLITRK1Q96PX8 696 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 RTP3Q9BQQ7 232 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 C10orf88Q9H8K7 445 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 KRT82Q9NSB4 513 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 TMLHEQ9NVH6 421 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 GPATCH2LQ9NWQ4 482 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 COX16Q9P0S2 106 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 WDR35Q9P2L0 1181 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 SNX24Q9Y343 169 aa11.43□□□□□ -0.58
SNRPA1-211ENST00000560433 C2CD4BA6NLJ0 364 aa11.42□□□□□ -0.58
SNRPA1-211ENST00000560433 NT5C1B-RDH14C9J2C7 533 aa11.42□□□□□ -0.58
SNRPA1-211ENST00000560433 FSCN2O14926 492 aa11.42□□□□□ -0.58
SNRPA1-211ENST00000560433 GPD1P21695 349 aa11.42□□□□□ -0.58
SNRPA1-211ENST00000560433 VPS41P49754 854 aa11.42□□□□□ -0.58
SNRPA1-211ENST00000560433 SLC6A3Q01959 620 aa11.42□□□□□ -0.58
SNRPA1-211ENST00000560433 STILQ15468 1287 aa11.42□□□□□ -0.58
SNRPA1-211ENST00000560433 TRIM60Q495X7 471 aa11.42□□□□□ -0.58
SNRPA1-211ENST00000560433 GLB1LQ6UWU2 654 aa11.42□□□□□ -0.58
SNRPA1-211ENST00000560433 CLEC20AQ6ZU45 233 aa11.42□□□□□ -0.58
SNRPA1-211ENST00000560433 GPRIN1Q7Z2K8 1008 aa11.42□□□□□ -0.58
SNRPA1-211ENST00000560433 JAMLQ86YT9 394 aa11.42□□□□□ -0.58
SNRPA1-211ENST00000560433 KATNAL2Q8IYT4 538 aa11.42□□□□□ -0.58
SNRPA1-211ENST00000560433 STKLD1Q8NE28 680 aa11.42□□□□□ -0.58
SNRPA1-211ENST00000560433 AENQ8WTP8 325 aaKnown RBP11.42□□□□□ -0.58
SNRPA1-211ENST00000560433 RIN2Q8WYP3 895 aaPredicted RBP11.42□□□□□ -0.58
SNRPA1-211ENST00000560433 FAM149B1Q96BN6 582 aa11.42□□□□□ -0.58
SNRPA1-211ENST00000560433 TSPAN18Q96SJ8 248 aa11.42□□□□□ -0.58
SNRPA1-211ENST00000560433 TBC1D13Q9NVG8 400 aa11.42□□□□□ -0.58
SNRPA1-211ENST00000560433 ENPP3O14638 875 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 UPP2O95045 317 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 ECHS1P30084 290 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 MAN1A1P33908 653 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 COILP38432 576 aaPredicted RBP11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 PITX1P78337 314 aaPredicted RBP11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 TAP1Q03518 808 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 MMRN1Q13201 1228 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 HDXQ7Z353 690 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 MAATS1Q7Z4T9 603 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 TMCO2Q7Z6W1 182 aaPredicted RBP11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 LRRTM3Q86VH5 581 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 DNAJC5GQ8N7S2 189 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 TSEN2Q8NCE0 465 aaKnown RBP11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 OR10T2Q8NGX3 314 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 CCDC114Q96M63 670 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 PLVAPQ9BX97 442 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 DUSP16Q9BY84 665 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 SLITRK6Q9H5Y7 841 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 WBP1LQ9NX94 342 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 CALCOCO1Q9P1Z2 691 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms