RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 TK2O00142 265 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 ARHGAP6O43182 974 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 MED7O43513 233 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 RTN2O75298 545 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 URODP06132 367 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 HAPLN1P10915 354 aaPredicted RBP9.92□□□□□ -0.82
HERC1-206ENST00000559996 ATF2P15336 505 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 DEKP35659 375 aaKnown RBP9.92□□□□□ -0.82
HERC1-206ENST00000559996 MAGEA11P43364 429 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 PLA2G4AP47712 749 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 GABRB2P47870 512 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 GPR15P49685 360 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 TSPY1Q01534 308 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 SMARCB1Q12824 385 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 TSR1Q2NL82 804 aaKnown RBP9.92□□□□□ -0.82
HERC1-206ENST00000559996 PTPN20Q4JDL3 420 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 HS1BP3Q53T59 392 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 C2CD6Q53TS8 623 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 PLPP4Q5VZY2 271 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 KIAA1841Q6NSI8 718 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 LLGL2Q6P1M3 1020 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 ALKBH5Q6P6C2 394 aaKnown RBP9.92□□□□□ -0.82
HERC1-206ENST00000559996 MON1BQ7L1V2 547 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 GPRIN1Q7Z2K8 1008 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 TMEM110Q86TL2 294 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 PHF13Q86YI8 300 aaPredicted RBP9.92□□□□□ -0.82
HERC1-206ENST00000559996 PASD1Q8IV76 773 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 MCOLN2Q8IZK6 566 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 C1orf131Q8NDD1 294 aaKnown RBP9.92□□□□□ -0.82
HERC1-206ENST00000559996 ACRBPQ8NEB7 543 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 CCDC112Q8NEF3 446 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 FEZF2Q8TBJ5 459 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 GDPD5Q8WTR4 605 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 SLC22A17Q8WUG5 538 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 FUBP3Q96I24 572 aaKnown RBP eCLIP9.92□□□□□ -0.82
HERC1-206ENST00000559996 CCDC42Q96M95 316 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 PGLYRP2Q96PD5 576 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 CPXM1Q96SM3 734 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 NGRNQ9NPE2 291 aaKnown RBP9.92□□□□□ -0.82
HERC1-206ENST00000559996 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.92□□□□□ -0.82
HERC1-206ENST00000559996 IL37Q9NZH6 218 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 AFF4Q9UHB7 1163 aaKnown RBP9.92□□□□□ -0.82
HERC1-206ENST00000559996 SLC27A5Q9Y2P5 690 aa9.92□□□□□ -0.82
HERC1-206ENST00000559996 PLXNA3P51805 1871 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 M0QYV0 167 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 XPO1O14980 1071 aaKnown RBP9.91□□□□□ -0.82
HERC1-206ENST00000559996 TGM5O43548 720 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 CLASP2O75122 1294 aaKnown RBP9.91□□□□□ -0.82
HERC1-206ENST00000559996 AP1G2O75843 785 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 SOAT2O75908 522 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 LSM8O95777 96 aaKnown RBP9.91□□□□□ -0.82
HERC1-206ENST00000559996 FTLP02792 175 aaPredicted RBP9.91□□□□□ -0.82
HERC1-206ENST00000559996 PTMAP06454 111 aaKnown RBP9.91□□□□□ -0.82
HERC1-206ENST00000559996 NPR3P17342 541 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 MMP8P22894 467 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 NDUFV1P49821 464 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 CLCN4P51793 760 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 GALCP54803 685 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 ARPP19P56211 112 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 MAP3K7CLP57077 242 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 ADCY1Q08828 1119 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 BST2Q10589 180 aaKnown RBP9.91□□□□□ -0.82
HERC1-206ENST00000559996 DUSP4Q13115 394 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 SMC1AQ14683 1233 aaKnown RBP9.91□□□□□ -0.82
HERC1-206ENST00000559996 MAPRE1Q15691 268 aaKnown RBP9.91□□□□□ -0.82
HERC1-206ENST00000559996 NFE2Q16621 373 aaPredicted RBP9.91□□□□□ -0.82
HERC1-206ENST00000559996 DDR2Q16832 855 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 CCDC122Q5T0U0 273 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 PRPF38BQ5VTL8 546 aaKnown RBP9.91□□□□□ -0.82
HERC1-206ENST00000559996 SDHAF4Q5VUM1 108 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 NAA35Q5VZE5 725 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 TPGS2Q68CL5 300 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 PDE12Q6L8Q7 609 aaKnown RBP9.91□□□□□ -0.82
HERC1-206ENST00000559996 TRIM72Q6ZMU5 477 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 BHLHA9Q7RTU4 235 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 PIGZQ86VD9 579 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 REXO1L1PQ8IX06 675 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 TCEAL8Q8IYN2 117 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 TMEM35BQ8NCS4 154 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 SPPL2BQ8TCT7 592 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 STK32AQ8WU08 396 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 KCTD13Q8WZ19 329 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 C8orf48Q96LL4 319 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 DESI2Q9BSY9 194 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.91□□□□□ -0.82
HERC1-206ENST00000559996 LACRTQ9GZZ8 138 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 LMAN2LQ9H0V9 348 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 ABCB6Q9NP58 842 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 HSFX1Q9UBD0 423 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 SALL4Q9UJQ4 1053 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 SSX2IPQ9Y2D8 614 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 PCDHB5Q9Y5E4 795 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 PCDHA13Q9Y5I0 950 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 USP3Q9Y6I4 520 aa9.91□□□□□ -0.82
HERC1-206ENST00000559996 MTCL1Q9Y4B5 1905 aaKnown RBP9.91□□□□□ -0.82
HERC1-206ENST00000559996 GREB1Q4ZG55 1949 aa9.9□□□□□ -0.82
HERC1-206ENST00000559996 NCANO14594 1321 aa9.9□□□□□ -0.82
HERC1-206ENST00000559996 MYO9BQ13459 2157 aa9.9□□□□□ -0.82
HERC1-206ENST00000559996 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.9□□□□□ -0.82
HERC1-206ENST00000559996 TMCO5BA8MYB1 307 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms