RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 PTMAP06454 111 aaKnown RBP5.58□□□□□ -1.52
SPG11-220ENST00000559933 LINC00271P0C7V0 271 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 SKILP12757 684 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 ACAT1P24752 427 aaKnown RBP5.58□□□□□ -1.52
SPG11-220ENST00000559933 GTF2H1P32780 548 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 USP8P40818 1118 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 JAM2P57087 298 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 RNASELQ05823 741 aaKnown RBP5.58□□□□□ -1.52
SPG11-220ENST00000559933 DSC1Q08554 894 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 TUSC3Q13454 348 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 CUL2Q13617 745 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 MTF1Q14872 753 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 DRAP1Q14919 205 aaPredicted RBP5.58□□□□□ -1.52
SPG11-220ENST00000559933 SURF1Q15526 300 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 ZNF394Q53GI3 561 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 TAS1R1Q7RTX1 841 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.58□□□□□ -1.52
SPG11-220ENST00000559933 OSTM1Q86WC4 334 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 ATCAYQ86WG3 371 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 COLGALT2Q8IYK4 626 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 HACE1Q8IYU2 909 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 ABI1Q8IZP0 508 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 C17orf53Q8N3J3 647 aaPredicted RBP5.58□□□□□ -1.52
SPG11-220ENST00000559933 TC2NQ8N9U0 490 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 OLIG1Q8TAK6 271 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 URGCPQ8TCY9 931 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 SLC20A1Q8WUM9 679 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 CACTINQ8WUQ7 758 aaKnown RBP5.58□□□□□ -1.52
SPG11-220ENST00000559933 KBTBD7Q8WVZ9 684 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 EDEM1Q92611 657 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 NT5C1BQ96P26 610 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 PPP1R9BQ96SB3 815 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 TMEM209Q96SK2 561 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 MMS19Q96T76 1030 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 YME1L1Q96TA2 773 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 MRPL45Q9BRJ2 306 aaKnown RBP5.58□□□□□ -1.52
SPG11-220ENST00000559933 VN1R3Q9BXE9 311 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 NIF3L1Q9GZT8 377 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 LACRTQ9GZZ8 138 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 DPEP3Q9H4B8 488 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 AKTIPQ9H8T0 292 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 UBE2TQ9NPD8 197 aaPredicted RBP5.58□□□□□ -1.52
SPG11-220ENST00000559933 ABHD10Q9NUJ1 306 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 MARCH5Q9NX47 278 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 CEP72Q9P209 647 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 CHD7Q9P2D1 2997 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 APEX2Q9UBZ4 518 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 L1RE1Q9UN81 338 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 DERAQ9Y315 318 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 COQ4Q9Y3A0 265 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 SNX9Q9Y5X1 595 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 CHD9Q3L8U1 2897 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 VWA8A3KMH1 1905 aa5.58□□□□□ -1.52
SPG11-220ENST00000559933 A0A0C4DFX4 3053 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 A0A0U1RQJ8 604 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 SOWAHDA6NJG2 315 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 KPNA7A9QM74 516 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 AKR1B15C9JRZ8 316 aaPredicted RBP5.57□□□□□ -1.52
SPG11-220ENST00000559933 FOXN3O00409 490 aaPredicted RBP5.57□□□□□ -1.52
SPG11-220ENST00000559933 NRP1O14786 923 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 PMM2O15305 246 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 P4HA2O15460 535 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 CYP26A1O43174 497 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 B3GAT3O94766 335 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 BAIAP3O94812 1187 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 PARNO95453 639 aaKnown RBP5.57□□□□□ -1.52
SPG11-220ENST00000559933 EOMESO95936 686 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 TPM3P06753 285 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 PFKMP08237 780 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 PDGFRBP09619 1106 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 OR4Q2P0C623 313 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 KRT5P13647 590 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 ATP2A2P16615 1042 aaKnown RBP5.57□□□□□ -1.52
SPG11-220ENST00000559933 ACO1P21399 889 aaKnown RBP5.57□□□□□ -1.52
SPG11-220ENST00000559933 TKTP29401 623 aaKnown RBP5.57□□□□□ -1.52
SPG11-220ENST00000559933 LRPAP1P30533 357 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 KRT9P35527 623 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 TAF6P49848 677 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 NDST1P52848 882 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 PSMC1P62191 440 aaKnown RBP5.57□□□□□ -1.52
SPG11-220ENST00000559933 TNNC1P63316 161 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 RBP5P82980 135 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 ATP11AP98196 1134 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 CCDC173Q0VFZ6 552 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 UPP1Q16831 310 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 SOWAHAQ2M3V2 549 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 WDR72Q3MJ13 1102 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 TIGD5Q53EQ6 642 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 ZNF667Q5HYK9 610 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 PRSS36Q5K4E3 855 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 SPOUT1Q5T280 376 aaKnown RBP5.57□□□□□ -1.52
SPG11-220ENST00000559933 KIAA0319Q5VV43 1072 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 TAF3Q5VWG9 929 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 WSCD1Q658N2 575 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 PSRC1Q6PGN9 363 aaPredicted RBP5.57□□□□□ -1.52
SPG11-220ENST00000559933 WDR59Q6PJI9 974 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 TMEM270Q6UE05 265 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 CACNA2D4Q7Z3S7 1137 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 USP37Q86T82 979 aa5.57□□□□□ -1.52
SPG11-220ENST00000559933 SLC47A2Q86VL8 602 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms