RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 UNC93AQ86WB7 457 aa15.76■□□□□ 0.11
RABGGTA-211ENST00000559850 CREBRFQ8IUR6 639 aa15.76■□□□□ 0.11
RABGGTA-211ENST00000559850 MFSD6LQ8IWD5 586 aa15.76■□□□□ 0.11
RABGGTA-211ENST00000559850 YAF2Q8IY57 180 aa15.76■□□□□ 0.11
RABGGTA-211ENST00000559850 CMTM8Q8IZV2 173 aa15.76■□□□□ 0.11
RABGGTA-211ENST00000559850 CRYBG2Q8N1P7 616 aa15.76■□□□□ 0.11
RABGGTA-211ENST00000559850 USP13Q92995 863 aaPredicted RBP15.76■□□□□ 0.11
RABGGTA-211ENST00000559850 GBP4Q96PP9 640 aa15.76■□□□□ 0.11
RABGGTA-211ENST00000559850 SMOQ99835 787 aa15.76■□□□□ 0.11
RABGGTA-211ENST00000559850 CYP3A43Q9HB55 503 aa15.76■□□□□ 0.11
RABGGTA-211ENST00000559850 METTL14Q9HCE5 456 aaKnown RBP15.76■□□□□ 0.11
RABGGTA-211ENST00000559850 UXTQ9UBK9 157 aaPredicted RBP15.76■□□□□ 0.11
RABGGTA-211ENST00000559850 MTF2Q9Y483 593 aaPredicted RBP15.76■□□□□ 0.11
RABGGTA-211ENST00000559850 ZDBF2Q9HCK1 2354 aa15.76■□□□□ 0.11
RABGGTA-211ENST00000559850 ATP8B3O60423 1300 aa15.75■□□□□ 0.11
RABGGTA-211ENST00000559850 ZNF263O14978 683 aa15.75■□□□□ 0.11
RABGGTA-211ENST00000559850 ABL1P00519 1130 aa15.75■□□□□ 0.11
RABGGTA-211ENST00000559850 DCNP07585 359 aaKnown RBP15.75■□□□□ 0.11
RABGGTA-211ENST00000559850 AOC1P19801 751 aa15.75■□□□□ 0.11
RABGGTA-211ENST00000559850 CLCN5P51795 746 aa15.75■□□□□ 0.11
RABGGTA-211ENST00000559850 MAP3K7CLP57077 242 aa15.75■□□□□ 0.11
RABGGTA-211ENST00000559850 PFKPQ01813 784 aa15.75■□□□□ 0.11
RABGGTA-211ENST00000559850 DPCR1Q3MIW9 517 aa15.75■□□□□ 0.11
RABGGTA-211ENST00000559850 ARL14EPQ8N8R7 260 aaPredicted RBP15.75■□□□□ 0.11
RABGGTA-211ENST00000559850 ZMIZ2Q8NF64 920 aa15.75■□□□□ 0.11
RABGGTA-211ENST00000559850 SCAMP5Q8TAC9 235 aa15.75■□□□□ 0.11
RABGGTA-211ENST00000559850 DEPDC1BQ8WUY9 529 aa15.75■□□□□ 0.11
RABGGTA-211ENST00000559850 SMARCD1Q96GM5 515 aa15.75■□□□□ 0.11
RABGGTA-211ENST00000559850 NT5C1AQ9BXI3 368 aa15.75■□□□□ 0.11
RABGGTA-211ENST00000559850 CISHQ9NSE2 258 aa15.75■□□□□ 0.11
RABGGTA-211ENST00000559850 RWDD2AQ9UIY3 292 aa15.75■□□□□ 0.11
RABGGTA-211ENST00000559850 COQ4Q9Y3A0 265 aa15.75■□□□□ 0.11
RABGGTA-211ENST00000559850 SHISA7A6NL88 538 aa15.74■□□□□ 0.11
RABGGTA-211ENST00000559850 AVPR1AP37288 418 aa15.74■□□□□ 0.11
RABGGTA-211ENST00000559850 SOX9P48436 509 aa15.74■□□□□ 0.11
RABGGTA-211ENST00000559850 TAF10Q12962 218 aa15.74■□□□□ 0.11
RABGGTA-211ENST00000559850 CUL2Q13617 745 aa15.74■□□□□ 0.11
RABGGTA-211ENST00000559850 UBXN2BQ14CS0 331 aa15.74■□□□□ 0.11
RABGGTA-211ENST00000559850 TRIM59Q8IWR1 403 aa15.74■□□□□ 0.11
RABGGTA-211ENST00000559850 NUP93Q8N1F7 819 aa15.74■□□□□ 0.11
RABGGTA-211ENST00000559850 BPIFB1Q8TDL5 484 aa15.74■□□□□ 0.11
RABGGTA-211ENST00000559850 KAT5Q92993 513 aa15.74■□□□□ 0.11
RABGGTA-211ENST00000559850 CYFIP2Q96F07 1278 aa15.74■□□□□ 0.11
RABGGTA-211ENST00000559850 TTLL2Q9BWV7 592 aa15.74■□□□□ 0.11
RABGGTA-211ENST00000559850 DMAP1Q9NPF5 467 aaPredicted RBP15.74■□□□□ 0.11
RABGGTA-211ENST00000559850 TRAV19A0A0A6YYK7 116 aa15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 ARNTLO00327 626 aa15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 CKMP06732 381 aa15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 DDX6P26196 483 aaKnown RBP eCLIP15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 SLC5A3P53794 718 aa15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 RAD23BP54727 409 aa15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 STARD6P59095 220 aa15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 TNK2Q07912 1038 aa15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 FCHO2Q0JRZ9 810 aa15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 KCNH2Q12809 1159 aa15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 TCF15Q12870 199 aa15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 PPP1R26Q5T8A7 1209 aaPredicted RBP15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 TRIM68Q6AZZ1 485 aa15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 FOXR2Q6PJQ5 311 aa15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 GPRIN1Q7Z2K8 1008 aa15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 ARHGEF19Q8IW93 802 aa15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 CELF5Q8N6W0 485 aaKnown RBP15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 SLC4A11Q8NBS3 891 aa15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 DNASE1L2Q92874 299 aa15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 IRF7Q92985 503 aa15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 E2F7Q96AV8 911 aa15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 CNOT6LQ96LI5 555 aaKnown RBP15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 HEXIM2Q96MH2 286 aaKnown RBP15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 TDP1Q9NUW8 608 aa15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 GTSE1Q9NYZ3 720 aa15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 TRPM5Q9NZQ8 1165 aa15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 GCNT4Q9P109 453 aa15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 CHORDC1Q9UHD1 332 aaPredicted RBP15.73■□□□□ 0.11
RABGGTA-211ENST00000559850 KANSL1LA0AUZ9 987 aa15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 ZNF840PA6NDX5 716 aa15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 TNFRSF10BO14763 440 aa15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 SCAMP3O14828 347 aaKnown RBP15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 CALCAP01258 141 aa15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 FAM200BP0CF97 657 aa15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 GLULP15104 373 aa15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 TARSP26639 723 aaKnown RBP15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 YWHAQP27348 245 aa15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 WEE1P30291 646 aa15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 PGFP49763 221 aa15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 PRKCQQ04759 706 aa15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 HSP90AA4PQ58FG1 418 aa15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 PHLDB3Q6NSJ2 640 aa15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 CLEC20AQ6ZU45 233 aa15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 IRF2BP1Q8IU81 584 aa15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 CCDC105Q8IYK2 499 aa15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 MLKLQ8NB16 471 aa15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 PJA1Q8NG27 643 aa15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 LMO3Q8TAP4 145 aa15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 FBXO32Q969P5 355 aa15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 TMEM176AQ96HP8 235 aa15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 HNRNPABQ99729 332 aaKnown RBP15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 DDX23Q9BUQ8 820 aaKnown RBP15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 RNF38Q9H0F5 515 aa15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 GMIPQ9P107 970 aa15.72■□□□□ 0.11
RABGGTA-211ENST00000559850 NDRG2Q9UN36 371 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms