RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 SLC16A3O15427 465 aaKnown RBP13.39□□□□□ -0.27
LRRC28-214ENST00000559433 LAMTOR5O43504 91 aa13.39□□□□□ -0.27
LRRC28-214ENST00000559433 STX10O60499 249 aa13.39□□□□□ -0.27
LRRC28-214ENST00000559433 TRIM21P19474 475 aaKnown RBP13.39□□□□□ -0.27
LRRC28-214ENST00000559433 NDST1P52848 882 aa13.39□□□□□ -0.27
LRRC28-214ENST00000559433 PMS1P54277 932 aaKnown RBP13.39□□□□□ -0.27
LRRC28-214ENST00000559433 CACNA2D1P54289 1103 aa13.39□□□□□ -0.27
LRRC28-214ENST00000559433 FKBP3Q00688 224 aaKnown RBP13.39□□□□□ -0.27
LRRC28-214ENST00000559433 LRRC63Q05C16 580 aa13.39□□□□□ -0.27
LRRC28-214ENST00000559433 ORC1Q13415 861 aa13.39□□□□□ -0.27
LRRC28-214ENST00000559433 ARHGAP29Q52LW3 1261 aa13.39□□□□□ -0.27
LRRC28-214ENST00000559433 DCAF17Q5H9S7 520 aaPredicted RBP13.39□□□□□ -0.27
LRRC28-214ENST00000559433 KRT39Q6A163 491 aa13.39□□□□□ -0.27
LRRC28-214ENST00000559433 CC2D1AQ6P1N0 951 aaPredicted RBP13.39□□□□□ -0.27
LRRC28-214ENST00000559433 C1orf228Q6PIY5 440 aa13.39□□□□□ -0.27
LRRC28-214ENST00000559433 ACOT1Q86TX2 421 aa13.39□□□□□ -0.27
LRRC28-214ENST00000559433 SPDYE1Q8NFV5 336 aaPredicted RBP13.39□□□□□ -0.27
LRRC28-214ENST00000559433 FAM3CQ92520 227 aa13.39□□□□□ -0.27
LRRC28-214ENST00000559433 ZFYVE19Q96K21 471 aa13.39□□□□□ -0.27
LRRC28-214ENST00000559433 NIF3L1Q9GZT8 377 aa13.39□□□□□ -0.27
LRRC28-214ENST00000559433 DLGAP2Q9P1A6 1054 aa13.39□□□□□ -0.27
LRRC28-214ENST00000559433 HMGXB4Q9UGU5 601 aa13.39□□□□□ -0.27
LRRC28-214ENST00000559433 NDRG2Q9UN36 371 aaKnown RBP13.39□□□□□ -0.27
LRRC28-214ENST00000559433 CCL26Q9Y258 94 aa13.39□□□□□ -0.27
LRRC28-214ENST00000559433 F5P12259 2224 aa13.38□□□□□ -0.27
LRRC28-214ENST00000559433 GFRA3O60609 400 aa13.38□□□□□ -0.27
LRRC28-214ENST00000559433 CCNE1P24864 410 aa13.38□□□□□ -0.27
LRRC28-214ENST00000559433 TARSP26639 723 aaKnown RBP13.38□□□□□ -0.27
LRRC28-214ENST00000559433 PPP1R2P41236 205 aa13.38□□□□□ -0.27
LRRC28-214ENST00000559433 MXI1P50539 228 aa13.38□□□□□ -0.27
LRRC28-214ENST00000559433 USP46P62068 366 aa13.38□□□□□ -0.27
LRRC28-214ENST00000559433 UBE2HP62256 183 aa13.38□□□□□ -0.27
LRRC28-214ENST00000559433 IFRD2Q12894 506 aaPredicted RBP13.38□□□□□ -0.27
LRRC28-214ENST00000559433 TCERG1LQ5VWI1 586 aa13.38□□□□□ -0.27
LRRC28-214ENST00000559433 ZC3H14Q6PJT7 736 aaKnown RBP13.38□□□□□ -0.27
LRRC28-214ENST00000559433 FRMD5Q7Z6J6 570 aa13.38□□□□□ -0.27
LRRC28-214ENST00000559433 FAM35AQ86V20 835 aa13.38□□□□□ -0.27
LRRC28-214ENST00000559433 UNC93AQ86WB7 457 aa13.38□□□□□ -0.27
LRRC28-214ENST00000559433 ZC3H3Q8IXZ2 948 aaKnown RBP13.38□□□□□ -0.27
LRRC28-214ENST00000559433 TTC16Q8NEE8 873 aa13.38□□□□□ -0.27
LRRC28-214ENST00000559433 USP13Q92995 863 aaPredicted RBP13.38□□□□□ -0.27
LRRC28-214ENST00000559433 NKD2Q969F2 451 aaPredicted RBP13.38□□□□□ -0.27
LRRC28-214ENST00000559433 SMARCD1Q96GM5 515 aa13.38□□□□□ -0.27
LRRC28-214ENST00000559433 DHTKD1Q96HY7 919 aaPredicted RBP13.38□□□□□ -0.27
LRRC28-214ENST00000559433 DNAI2Q9GZS0 605 aa13.38□□□□□ -0.27
LRRC28-214ENST00000559433 C8orf33Q9H7E9 229 aaPredicted RBP13.38□□□□□ -0.27
LRRC28-214ENST00000559433 KIF9Q9HAQ2 790 aa13.38□□□□□ -0.27
LRRC28-214ENST00000559433 APOBEC3GQ9HC16 384 aaKnown RBP13.38□□□□□ -0.27
LRRC28-214ENST00000559433 KRT82Q9NSB4 513 aa13.38□□□□□ -0.27
LRRC28-214ENST00000559433 TDP1Q9NUW8 608 aa13.38□□□□□ -0.27
LRRC28-214ENST00000559433 TMEM30AQ9NV96 361 aa13.38□□□□□ -0.27
LRRC28-214ENST00000559433 C2orf78A6NCI8 922 aa13.37□□□□□ -0.27
LRRC28-214ENST00000559433 BIN1O00499 593 aa13.37□□□□□ -0.27
LRRC28-214ENST00000559433 CKMP06732 381 aa13.37□□□□□ -0.27
LRRC28-214ENST00000559433 USP17L7P0C7H9 530 aa13.37□□□□□ -0.27
LRRC28-214ENST00000559433 CCDC130P13994 396 aa13.37□□□□□ -0.27
LRRC28-214ENST00000559433 CD44P16070 742 aaKnown RBP13.37□□□□□ -0.27
LRRC28-214ENST00000559433 CD58P19256 250 aa13.37□□□□□ -0.27
LRRC28-214ENST00000559433 NBL1P41271 181 aa13.37□□□□□ -0.27
LRRC28-214ENST00000559433 MCCD1P59942 119 aaPredicted RBP13.37□□□□□ -0.27
LRRC28-214ENST00000559433 MORC3Q14149 939 aa13.37□□□□□ -0.27
LRRC28-214ENST00000559433 ZNF268Q14587 947 aaPredicted RBP13.37□□□□□ -0.27
LRRC28-214ENST00000559433 PPP2R5DQ14738 602 aa13.37□□□□□ -0.27
LRRC28-214ENST00000559433 KLHL10Q6JEL2 608 aa13.37□□□□□ -0.27
LRRC28-214ENST00000559433 FBXL13Q8NEE6 735 aa13.37□□□□□ -0.27
LRRC28-214ENST00000559433 TTC8Q8TAM2 541 aa13.37□□□□□ -0.27
LRRC28-214ENST00000559433 SEMA4DQ92854 862 aa13.37□□□□□ -0.27
LRRC28-214ENST00000559433 MSANTD3Q96H12 275 aa13.37□□□□□ -0.27
LRRC28-214ENST00000559433 TTLL2Q9BWV7 592 aa13.37□□□□□ -0.27
LRRC28-214ENST00000559433 CYP3A43Q9HB55 503 aa13.37□□□□□ -0.27
LRRC28-214ENST00000559433 DMAP1Q9NPF5 467 aaPredicted RBP13.37□□□□□ -0.27
LRRC28-214ENST00000559433 FAM49BQ9NUQ9 324 aa13.37□□□□□ -0.27
LRRC28-214ENST00000559433 GTSE1Q9NYZ3 720 aa13.37□□□□□ -0.27
LRRC28-214ENST00000559433 TRPM5Q9NZQ8 1165 aa13.37□□□□□ -0.27
LRRC28-214ENST00000559433 ARMCX3Q9UH62 379 aaPredicted RBP13.37□□□□□ -0.27
LRRC28-214ENST00000559433 CTNND2Q9UQB3 1225 aa13.37□□□□□ -0.27
LRRC28-214ENST00000559433 CACNA1IQ9P0X4 2223 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 SHISA7A6NL88 538 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 AP1G2O75843 785 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 BMP6P22004 513 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 SOX9P48436 509 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 PDE6CP51160 858 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 MLLT6P55198 1093 aaPredicted RBP13.36□□□□□ -0.27
LRRC28-214ENST00000559433 AMPD2Q01433 879 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 CSTF1Q05048 431 aaKnown RBP13.36□□□□□ -0.27
LRRC28-214ENST00000559433 TNK2Q07912 1038 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 INCA1Q0VD86 236 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 PAQR9Q6ZVX9 377 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 FUKQ8N0W3 1084 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 NUP93Q8N1F7 819 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 CRYBG2Q8N1P7 616 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 ARL14EPQ8N8R7 260 aaPredicted RBP13.36□□□□□ -0.27
LRRC28-214ENST00000559433 SLC2A14Q8TDB8 520 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 NELFBQ8WX92 580 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 CEP63Q96MT8 703 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 SLITRK1Q96PX8 696 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 TWNKQ96RR1 684 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 SLC22A12Q96S37 553 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 CYP2S1Q96SQ9 504 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 KCNK16Q96T55 309 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms