RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 SOX9P48436 509 aa12.79□□□□□ -0.36
TPM1-216ENST00000558910 NDST1P52848 882 aa12.79□□□□□ -0.36
TPM1-216ENST00000558910 AP3M2P53677 418 aa12.79□□□□□ -0.36
TPM1-216ENST00000558910 EPHA5P54756 1037 aa12.79□□□□□ -0.36
TPM1-216ENST00000558910 LRMPQ12912 555 aa12.79□□□□□ -0.36
TPM1-216ENST00000558910 STIM1Q13586 685 aa12.79□□□□□ -0.36
TPM1-216ENST00000558910 SGSM1Q2NKQ1 1148 aa12.79□□□□□ -0.36
TPM1-216ENST00000558910 ZACNQ401N2 412 aa12.79□□□□□ -0.36
TPM1-216ENST00000558910 CCDC40Q4G0X9 1142 aa12.79□□□□□ -0.36
TPM1-216ENST00000558910 ZNF394Q53GI3 561 aa12.79□□□□□ -0.36
TPM1-216ENST00000558910 FAM171BQ6P995 826 aa12.79□□□□□ -0.36
TPM1-216ENST00000558910 INTS8Q75QN2 995 aaKnown RBP12.79□□□□□ -0.36
TPM1-216ENST00000558910 MYCBPAPQ8TBZ2 947 aa12.79□□□□□ -0.36
TPM1-216ENST00000558910 MRPS31Q92665 395 aaKnown RBP12.79□□□□□ -0.36
TPM1-216ENST00000558910 ATOH1Q92858 354 aaPredicted RBP12.79□□□□□ -0.36
TPM1-216ENST00000558910 TIGD1Q96MW7 591 aa12.79□□□□□ -0.36
TPM1-216ENST00000558910 CYP2S1Q96SQ9 504 aa12.79□□□□□ -0.36
TPM1-216ENST00000558910 SLC46A2Q9BY10 475 aa12.79□□□□□ -0.36
TPM1-216ENST00000558910 B3GNT5Q9BYG0 378 aa12.79□□□□□ -0.36
TPM1-216ENST00000558910 IMPG2Q9BZV3 1241 aa12.79□□□□□ -0.36
TPM1-216ENST00000558910 APOBEC3GQ9HC16 384 aaKnown RBP12.79□□□□□ -0.36
TPM1-216ENST00000558910 MTF2Q9Y483 593 aaPredicted RBP12.79□□□□□ -0.36
TPM1-216ENST00000558910 SCAMP3O14828 347 aaKnown RBP12.78□□□□□ -0.36
TPM1-216ENST00000558910 TACC1O75410 805 aa12.78□□□□□ -0.36
TPM1-216ENST00000558910 P4HA1P13674 534 aa12.78□□□□□ -0.36
TPM1-216ENST00000558910 PSMC3P17980 439 aa12.78□□□□□ -0.36
TPM1-216ENST00000558910 AVPR1AP37288 418 aa12.78□□□□□ -0.36
TPM1-216ENST00000558910 NLRP12P59046 1061 aa12.78□□□□□ -0.36
TPM1-216ENST00000558910 USP46P62068 366 aa12.78□□□□□ -0.36
TPM1-216ENST00000558910 ZCWPW2Q504Y3 356 aa12.78□□□□□ -0.36
TPM1-216ENST00000558910 LIMS2Q7Z4I7 341 aa12.78□□□□□ -0.36
TPM1-216ENST00000558910 ADSSL1Q8N142 457 aa12.78□□□□□ -0.36
TPM1-216ENST00000558910 C12orf29Q8N999 325 aa12.78□□□□□ -0.36
TPM1-216ENST00000558910 B3GALNT2Q8NCR0 500 aa12.78□□□□□ -0.36
TPM1-216ENST00000558910 CCDC150Q8NCX0 1101 aa12.78□□□□□ -0.36
TPM1-216ENST00000558910 NELFBQ8WX92 580 aa12.78□□□□□ -0.36
TPM1-216ENST00000558910 SEMA4DQ92854 862 aa12.78□□□□□ -0.36
TPM1-216ENST00000558910 LRRC3BQ96PB8 259 aa12.78□□□□□ -0.36
TPM1-216ENST00000558910 MKNK1Q9BUB5 465 aa12.78□□□□□ -0.36
TPM1-216ENST00000558910 TASP1Q9H6P5 420 aa12.78□□□□□ -0.36
TPM1-216ENST00000558910 SLC2A4RGQ9NR83 387 aa12.78□□□□□ -0.36
TPM1-216ENST00000558910 CCL26Q9Y258 94 aa12.78□□□□□ -0.36
TPM1-216ENST00000558910 C2orf78A6NCI8 922 aa12.77□□□□□ -0.37
TPM1-216ENST00000558910 FAM170BA6NMN3 283 aa12.77□□□□□ -0.37
TPM1-216ENST00000558910 PSMA7O14818 248 aa12.77□□□□□ -0.37
TPM1-216ENST00000558910 FGF19O95750 216 aa12.77□□□□□ -0.37
TPM1-216ENST00000558910 F11P03951 625 aa12.77□□□□□ -0.37
TPM1-216ENST00000558910 AOC1P19801 751 aa12.77□□□□□ -0.37
TPM1-216ENST00000558910 MXI1P50539 228 aa12.77□□□□□ -0.37
TPM1-216ENST00000558910 KPNA1P52294 538 aaPredicted RBP12.77□□□□□ -0.37
TPM1-216ENST00000558910 NOP14P78316 857 aaKnown RBP12.77□□□□□ -0.37
TPM1-216ENST00000558910 PFKPQ01813 784 aa12.77□□□□□ -0.37
TPM1-216ENST00000558910 NHLH1Q02575 133 aa12.77□□□□□ -0.37
TPM1-216ENST00000558910 TNK2Q07912 1038 aa12.77□□□□□ -0.37
TPM1-216ENST00000558910 TCF15Q12870 199 aa12.77□□□□□ -0.37
TPM1-216ENST00000558910 MAPRE1Q15691 268 aaKnown RBP12.77□□□□□ -0.37
TPM1-216ENST00000558910 EDRF1Q3B7T1 1238 aa12.77□□□□□ -0.37
TPM1-216ENST00000558910 TRIM68Q6AZZ1 485 aa12.77□□□□□ -0.37
TPM1-216ENST00000558910 TMEM150AQ86TG1 271 aa12.77□□□□□ -0.37
TPM1-216ENST00000558910 ALYREFQ86V81 257 aaKnown RBP12.77□□□□□ -0.37
TPM1-216ENST00000558910 MFSD6LQ8IWD5 586 aa12.77□□□□□ -0.37
TPM1-216ENST00000558910 FAM160A2Q8N612 972 aaPredicted RBP12.77□□□□□ -0.37
TPM1-216ENST00000558910 ARL14EPQ8N8R7 260 aaPredicted RBP12.77□□□□□ -0.37
TPM1-216ENST00000558910 CSGALNACT1Q8TDX6 532 aa12.77□□□□□ -0.37
TPM1-216ENST00000558910 TWNKQ96RR1 684 aa12.77□□□□□ -0.37
TPM1-216ENST00000558910 KCNK16Q96T55 309 aa12.77□□□□□ -0.37
TPM1-216ENST00000558910 GPR88Q9GZN0 384 aa12.77□□□□□ -0.37
TPM1-216ENST00000558910 TMEM8AQ9HCN3 771 aa12.77□□□□□ -0.37
TPM1-216ENST00000558910 TMEM30AQ9NV96 361 aa12.77□□□□□ -0.37
TPM1-216ENST00000558910 HSFX1Q9UBD0 423 aa12.77□□□□□ -0.37
TPM1-216ENST00000558910 SIT1Q9Y3P8 196 aa12.77□□□□□ -0.37
TPM1-216ENST00000558910 ZNF318Q5VUA4 2279 aa12.77□□□□□ -0.37
TPM1-216ENST00000558910 IKBKBO14920 756 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 TADA3O75528 432 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 AP1G2O75843 785 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 MICAL2O94851 1124 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 ASS1P00966 412 aaKnown RBP12.76□□□□□ -0.37
TPM1-216ENST00000558910 CKMP06732 381 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 BMP6P22004 513 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 CCNE1P24864 410 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 ASPAP45381 313 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 CLCN5P51795 746 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 MAP3K7CLP57077 242 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 UBE2HP62256 183 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 CLDN10P78369 228 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 FKBP3Q00688 224 aaKnown RBP12.76□□□□□ -0.37
TPM1-216ENST00000558910 NFIL3Q16649 462 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 CFAP221Q4G0U5 840 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 CBWD6Q4V339 395 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 CBWD3Q5JTY5 395 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 PLA2G2CQ5R387 149 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 CBWD5Q5RIA9 395 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 KRT39Q6A163 491 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 BRICD5Q6PL45 260 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 DENND5BQ6ZUT9 1274 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 FAM35AQ86V20 835 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 CMTM8Q8IZV2 173 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 DTWD2Q8NBA8 298 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 SPATA18Q8TC71 538 aa12.76□□□□□ -0.37
TPM1-216ENST00000558910 SLC2A14Q8TDB8 520 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms