RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 CCDC154A6NI56 674 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 F5H6K3 240 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 DAPK3O43293 454 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 HTRA2O43464 458 aaPredicted RBP6.9□□□□□ -1.3
LRRC28-209ENST00000558861 CA12O43570 354 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 PRC1O43663 620 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 NOBOXO60393 691 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 B4GALT3O60512 393 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 TOP1P11387 765 aaKnown RBP6.9□□□□□ -1.3
LRRC28-209ENST00000558861 CPA1P15085 419 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 CFPP27918 469 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 USP14P54578 494 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 EVCP57679 992 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 GJA9P57773 515 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 KLRC3Q07444 240 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 MGAT2Q10469 447 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 NOMO1Q15155 1222 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 RNF151Q2KHN1 245 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 C3orf36Q3SXR2 165 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 ZMAT1Q5H9K5 638 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 IFIT1BQ5T764 474 aaKnown RBP6.9□□□□□ -1.3
LRRC28-209ENST00000558861 LILRA6Q6PI73 481 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 CATSPERGQ6ZRH7 1159 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 FASTKD5Q7L8L6 764 aaKnown RBP6.9□□□□□ -1.3
LRRC28-209ENST00000558861 CHST3Q7LGC8 479 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 SGMS1Q86VZ5 419 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 SYT8Q8NBV8 401 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 PLA2G15Q8NCC3 412 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 REPS2Q8NFH8 660 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 NCOA7Q8NI08 942 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 TTC8Q8TAM2 541 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 HOXB13Q92826 284 aaPredicted RBP6.9□□□□□ -1.3
LRRC28-209ENST00000558861 C8orf48Q96LL4 319 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 AIFM3Q96NN9 605 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 NEK1Q96PY6 1258 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 TLR9Q9NR96 1032 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 ING3Q9NXR8 418 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 SAGE1Q9NXZ1 904 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 ADAMTS5Q9UNA0 930 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 STX8Q9UNK0 236 aa6.9□□□□□ -1.3
LRRC28-209ENST00000558861 MYH8P13535 1937 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 PDHXO00330 501 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 WDR46O15213 610 aaKnown RBP6.89□□□□□ -1.31
LRRC28-209ENST00000558861 AKR1B10O60218 316 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 PLA2G6O60733 806 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 CNMDO75829 334 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 ALDH1A2O94788 518 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 TOX4O94842 621 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 PDHBP11177 359 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 ZKSCAN1P17029 563 aaPredicted RBP6.89□□□□□ -1.31
LRRC28-209ENST00000558861 RPS6KB1P23443 525 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 ADSLP30566 484 aaPredicted RBP6.89□□□□□ -1.31
LRRC28-209ENST00000558861 MCM5P33992 734 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 LIFRP42702 1097 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 ATP2C1P98194 919 aaPredicted RBP6.89□□□□□ -1.31
LRRC28-209ENST00000558861 MAP2K1Q02750 393 aaPredicted RBP6.89□□□□□ -1.31
LRRC28-209ENST00000558861 HGFACQ04756 655 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 GRM1Q13255 1194 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 CRHR2Q13324 411 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 TOB2Q14106 344 aaPredicted RBP6.89□□□□□ -1.31
LRRC28-209ENST00000558861 KRT32Q14532 448 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 MST1LQ2TV78 715 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 NT5DC1Q5TFE4 455 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 C17orf99Q6UX52 265 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 USP30Q70CQ3 517 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 NOL8Q76FK4 1167 aaKnown RBP6.89□□□□□ -1.31
LRRC28-209ENST00000558861 TAS1R1Q7RTX1 841 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 IQCA1Q86XH1 822 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 C1QL4Q86Z23 238 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 SPICE1Q8N0Z3 855 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 GPR156Q8NFN8 814 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 SNX33Q8WV41 574 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 SLC7A6OSQ96CW6 309 aaPredicted RBP6.89□□□□□ -1.31
LRRC28-209ENST00000558861 PAWRQ96IZ0 340 aaKnown RBP6.89□□□□□ -1.31
LRRC28-209ENST00000558861 TCEANC2Q96MN5 208 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 JAKMIP1Q96N16 626 aaKnown RBP6.89□□□□□ -1.31
LRRC28-209ENST00000558861 LRRC2Q9BYS8 371 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 RPAP3Q9H6T3 665 aaPredicted RBP6.89□□□□□ -1.31
LRRC28-209ENST00000558861 TXNRD2Q9NNW7 524 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 FBXO28Q9NVF7 368 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 RPTORQ8N122 1335 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 NID2Q14112 1375 aa6.89□□□□□ -1.31
LRRC28-209ENST00000558861 ADAMTS20P59510 1910 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 A0A0G2JMZ2 1700 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 KRTAP9-6A0A140TA67 174 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 VSTM5A8MXK1 200 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 IFIT3O14879 490 aaKnown RBP6.88□□□□□ -1.31
LRRC28-209ENST00000558861 FOXN1O15353 648 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 ARHGAP6O43182 974 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 AP1G1O43747 822 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 TLR2O60603 784 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 TRIM13O60858 407 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 POU2F2P09086 479 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 PDCP20941 246 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 AKAP5P24588 427 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 CTGFP29279 349 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 WASP42768 502 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 KCNC1P48547 511 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 BPIFB4P59827 614 aa6.88□□□□□ -1.31
LRRC28-209ENST00000558861 ZNF543Q08ER8 600 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms