RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 TPM4P67936 248 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 PFKPQ01813 784 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 ARHGAP44Q17R89 818 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 KLHL40Q2TBA0 621 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 ANO6Q4KMQ2 910 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 TCP11X2Q5H9J9 407 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 FKBP15Q5T1M5 1219 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 PPP1R26Q5T8A7 1209 aaPredicted RBP9.51□□□□□ -0.89
SPG11-207ENST00000558138 TXNDC8Q6A555 127 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 TANGO2Q6ICL3 276 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 CC2D1AQ6P1N0 951 aaPredicted RBP9.51□□□□□ -0.89
SPG11-207ENST00000558138 RBM43Q6ZSC3 357 aaKnown RBP9.51□□□□□ -0.89
SPG11-207ENST00000558138 GAREM2Q75VX8 874 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 ARID3BQ8IVW6 561 aaPredicted RBP9.51□□□□□ -0.89
SPG11-207ENST00000558138 ARHGEF19Q8IW93 802 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 FUKQ8N0W3 1084 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 CRYBG2Q8N1P7 616 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 AOPEPQ8N6M6 819 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 PDZD8Q8NEN9 1154 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 FLCNQ8NFG4 579 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 PBXIP1Q96AQ6 731 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 E2F7Q96AV8 911 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 ELSPBP1Q96BH3 223 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 TRMT2BQ96GJ1 504 aaKnown RBP9.51□□□□□ -0.89
SPG11-207ENST00000558138 FAM81BQ96LP2 452 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 CEP295NLQ96MC4 621 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 ZSWIM3Q96MP5 696 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 ASB16Q96NS5 453 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 KCNK16Q96T55 309 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 TRMT61BQ9BVS5 477 aaKnown RBP9.51□□□□□ -0.89
SPG11-207ENST00000558138 LRRC3Q9BY71 257 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 SMG9Q9H0W8 520 aaKnown RBP9.51□□□□□ -0.89
SPG11-207ENST00000558138 NDST4Q9H3R1 872 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 FBXO44Q9H4M3 255 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 THG1LQ9NWX6 298 aaKnown RBP9.51□□□□□ -0.89
SPG11-207ENST00000558138 ZMYM5Q9UJ78 669 aa9.51□□□□□ -0.89
SPG11-207ENST00000558138 SMTNL1A8MU46 457 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 HEPACAM2A8MVW5 462 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 ANHXE9PGG2 379 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 M0QYV0 167 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 ZNF263O14978 683 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 PMM2O15305 246 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 MOSPD3O75425 235 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 F11P03951 625 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 USP17L7P0C7H9 530 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 VDRP11473 427 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 HMGA1P17096 107 aaKnown RBP9.5□□□□□ -0.89
SPG11-207ENST00000558138 NPR3P17342 541 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 PSMC3P17980 439 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 ACO1P21399 889 aaKnown RBP9.5□□□□□ -0.89
SPG11-207ENST00000558138 GDI1P31150 447 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 PPP3CCP48454 512 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 RAD23BP54727 409 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 TAF10Q12962 218 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 RAPGEF1Q13905 1077 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 SKOR2Q2VWA4 1001 aaPredicted RBP9.5□□□□□ -0.89
SPG11-207ENST00000558138 TRIM65Q6PJ69 517 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 CMTM8Q8IZV2 173 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 SIX5Q8N196 739 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 SLC4A11Q8NBS3 891 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 RBBP8NLQ8NC74 664 aaPredicted RBP9.5□□□□□ -0.89
SPG11-207ENST00000558138 CSGALNACT1Q8TDX6 532 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 DEPDC1BQ8WUY9 529 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 KAT5Q92993 513 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 HNRNPABQ99729 332 aaKnown RBP9.5□□□□□ -0.89
SPG11-207ENST00000558138 SMOQ99835 787 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 RPP25Q9BUL9 199 aaKnown RBP9.5□□□□□ -0.89
SPG11-207ENST00000558138 LSM14BQ9BX40 385 aaKnown RBP9.5□□□□□ -0.89
SPG11-207ENST00000558138 VPS16Q9H269 839 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 FAM124BQ9H5Z6 455 aaPredicted RBP9.5□□□□□ -0.89
SPG11-207ENST00000558138 FANCLQ9NW38 375 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 DOCK8Q8NF50 2099 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 VCANP13611 3396 aa9.5□□□□□ -0.89
SPG11-207ENST00000558138 NOTCH4Q99466 2003 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 MYO10Q9HD67 2058 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 PTPRDP23468 1912 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 GTPBP10A4D1E9 387 aaKnown RBP9.49□□□□□ -0.89
SPG11-207ENST00000558138 PRR33A8MZF0 331 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 NRG2O14511 850 aaPredicted RBP9.49□□□□□ -0.89
SPG11-207ENST00000558138 MED7O43513 233 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 MBL2P11226 248 aaPredicted RBP9.49□□□□□ -0.89
SPG11-207ENST00000558138 HDCP19113 662 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 SLC9A1P19634 815 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 BRD2P25440 801 aaKnown RBP9.49□□□□□ -0.89
SPG11-207ENST00000558138 BCAT1P54687 386 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 MCCD1P59942 119 aaPredicted RBP9.49□□□□□ -0.89
SPG11-207ENST00000558138 USP46P62068 366 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 GPC5P78333 572 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 GCNT1Q02742 428 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 GJB7Q6PEY0 223 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 VITQ6UXI7 678 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 CLEC20AQ6ZU45 233 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 ENOSF1Q7L5Y1 443 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 MON1AQ86VX9 555 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 IRF2BP1Q8IU81 584 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 CELF5Q8N6W0 485 aaKnown RBP9.49□□□□□ -0.89
SPG11-207ENST00000558138 ARL14EPQ8N8R7 260 aaPredicted RBP9.49□□□□□ -0.89
SPG11-207ENST00000558138 SCAMP5Q8TAC9 235 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 BPIFB1Q8TDL5 484 aa9.49□□□□□ -0.89
SPG11-207ENST00000558138 WHAMMQ8TF30 809 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms