RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 FBLP22087 321 aaKnown RBP4.14□□□□□ -1.75
SPG11-206ENST00000558093 PCSK6P29122 969 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 DGKEP52429 567 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 ATXN1P54253 815 aaKnown RBP4.14□□□□□ -1.75
SPG11-206ENST00000558093 C21orf58P58505 322 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 RPS16P62249 146 aaKnown RBP4.14□□□□□ -1.75
SPG11-206ENST00000558093 CNGA2Q16280 664 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 CCDC142Q17RM4 750 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 INSCQ1MX18 579 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 C3orf38Q5JPI3 329 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 AARS2Q5JTZ9 985 aaKnown RBP4.14□□□□□ -1.75
SPG11-206ENST00000558093 PCID2Q5JVF3 399 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 CERCAMQ5T4B2 595 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 FCRLBQ6BAA4 426 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 ZNF788Q6ZQV5 615 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 PTF1AQ7RTS3 328 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 WDR53Q7Z5U6 358 aaPredicted RBP4.14□□□□□ -1.75
SPG11-206ENST00000558093 OR56A3Q8NH54 315 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 SMCR8Q8TEV9 937 aaPredicted RBP4.14□□□□□ -1.75
SPG11-206ENST00000558093 TMEM171Q8WVE6 324 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 MAML1Q92585 1016 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 TBC1D5Q92609 795 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 PPP2R3CQ969Q6 453 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 TRIM43Q96BQ3 446 aaPredicted RBP4.14□□□□□ -1.75
SPG11-206ENST00000558093 OBP2AQ9NY56 170 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 STK32BQ9NY57 414 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 COL11A2P13942 1736 aaPredicted RBP4.14□□□□□ -1.75
SPG11-206ENST00000558093 LOC102723971A0A1B0GUV8 181 aa4.13□□□□□ -1.75
SPG11-206ENST00000558093 MANSC4A6NHS7 340 aaPredicted RBP4.13□□□□□ -1.75
SPG11-206ENST00000558093 PYCARD-AS1I3L0S3 204 aa4.13□□□□□ -1.75
SPG11-206ENST00000558093 PSMD9O00233 223 aa4.13□□□□□ -1.75
SPG11-206ENST00000558093 DLDP09622 509 aaKnown RBP4.13□□□□□ -1.75
SPG11-206ENST00000558093 JUPP14923 745 aa4.13□□□□□ -1.75
SPG11-206ENST00000558093 ZNF37AP17032 561 aaPredicted RBP4.13□□□□□ -1.75
SPG11-206ENST00000558093 PRKAR1BP31321 381 aa4.13□□□□□ -1.75
SPG11-206ENST00000558093 ITGA8P53708 1063 aa4.13□□□□□ -1.75
SPG11-206ENST00000558093 TMEM119Q4V9L6 283 aa4.13□□□□□ -1.75
SPG11-206ENST00000558093 PARS2Q7L3T8 475 aaKnown RBP4.13□□□□□ -1.75
SPG11-206ENST00000558093 CHST15Q7LFX5 561 aaPredicted RBP4.13□□□□□ -1.75
SPG11-206ENST00000558093 IZUMO1Q8IYV9 350 aa4.13□□□□□ -1.75
SPG11-206ENST00000558093 ABRAQ8N0Z2 381 aa4.13□□□□□ -1.75
SPG11-206ENST00000558093 HASPINQ8TF76 798 aa4.13□□□□□ -1.75
SPG11-206ENST00000558093 NMD3Q96D46 503 aaKnown RBP4.13□□□□□ -1.75
SPG11-206ENST00000558093 BHMT2Q9H2M3 363 aa4.13□□□□□ -1.75
SPG11-206ENST00000558093 DLL3Q9NYJ7 618 aa4.13□□□□□ -1.75
SPG11-206ENST00000558093 ADAM21Q9UKJ8 722 aa4.13□□□□□ -1.75
SPG11-206ENST00000558093 ITGB1BP2Q9UKP3 347 aa4.13□□□□□ -1.75
SPG11-206ENST00000558093 TBC1D30Q9Y2I9 924 aa4.13□□□□□ -1.75
SPG11-206ENST00000558093 PCDHGB6Q9Y5F9 930 aa4.13□□□□□ -1.75
SPG11-206ENST00000558093 SNX14Q9Y5W7 946 aa4.13□□□□□ -1.75
SPG11-206ENST00000558093 SNX13Q9Y5W8 968 aa4.13□□□□□ -1.75
SPG11-206ENST00000558093 H7C4K7 107 aa4.12□□□□□ -1.75
SPG11-206ENST00000558093 SMIM22K7EJ46 135 aa4.12□□□□□ -1.75
SPG11-206ENST00000558093 RAB27BO00194 218 aa4.12□□□□□ -1.75
SPG11-206ENST00000558093 JTBO76095 146 aa4.12□□□□□ -1.75
SPG11-206ENST00000558093 VNN1O95497 513 aa4.12□□□□□ -1.75
SPG11-206ENST00000558093 HRGP04196 525 aa4.12□□□□□ -1.75
SPG11-206ENST00000558093 ERBB2P04626 1255 aa4.12□□□□□ -1.75
SPG11-206ENST00000558093 MYF5P13349 255 aa4.12□□□□□ -1.75
SPG11-206ENST00000558093 RHCEP18577 417 aa4.12□□□□□ -1.75
SPG11-206ENST00000558093 ITPKBP27987 946 aa4.12□□□□□ -1.75
SPG11-206ENST00000558093 PROK1P58294 105 aa4.12□□□□□ -1.75
SPG11-206ENST00000558093 RHDQ02161 417 aa4.12□□□□□ -1.75
SPG11-206ENST00000558093 NHLH1Q02575 133 aa4.12□□□□□ -1.75
SPG11-206ENST00000558093 NAPRTQ6XQN6 538 aa4.12□□□□□ -1.75
SPG11-206ENST00000558093 CAND1Q86VP6 1230 aaKnown RBP4.12□□□□□ -1.75
SPG11-206ENST00000558093 MICU3Q86XE3 530 aa4.12□□□□□ -1.75
SPG11-206ENST00000558093 ABHD11Q8NFV4 315 aa4.12□□□□□ -1.75
SPG11-206ENST00000558093 RP9Q8TA86 221 aaKnown RBP4.12□□□□□ -1.75
SPG11-206ENST00000558093 DNAJB14Q8TBM8 379 aa4.12□□□□□ -1.75
SPG11-206ENST00000558093 IPCEF1Q8WWN9 437 aaPredicted RBP4.12□□□□□ -1.75
SPG11-206ENST00000558093 SOCS4Q8WXH5 440 aa4.12□□□□□ -1.75
SPG11-206ENST00000558093 TTC17Q96AE7 1141 aa4.12□□□□□ -1.75
SPG11-206ENST00000558093 APIPQ96GX9 242 aa4.12□□□□□ -1.75
SPG11-206ENST00000558093 GBA2Q9HCG7 927 aaPredicted RBP4.12□□□□□ -1.75
SPG11-206ENST00000558093 DUSP22Q9NRW4 184 aa4.12□□□□□ -1.75
SPG11-206ENST00000558093 ADAMTS5Q9UNA0 930 aa4.12□□□□□ -1.75
SPG11-206ENST00000558093 CDY1Q9Y6F8 540 aa4.12□□□□□ -1.75
SPG11-206ENST00000558093 TARM1B6A8C7 271 aa4.11□□□□□ -1.75
SPG11-206ENST00000558093 CCP110O43303 1012 aa4.11□□□□□ -1.75
SPG11-206ENST00000558093 RBMXL2O75526 392 aaKnown RBP4.11□□□□□ -1.75
SPG11-206ENST00000558093 PIAS2O75928 621 aa4.11□□□□□ -1.75
SPG11-206ENST00000558093 PRKCBP05771 671 aa4.11□□□□□ -1.75
SPG11-206ENST00000558093 ACVR2AP27037 513 aa4.11□□□□□ -1.75
SPG11-206ENST00000558093 PTDSS1P48651 473 aaKnown RBP4.11□□□□□ -1.75
SPG11-206ENST00000558093 CARSP49589 748 aaKnown RBP4.11□□□□□ -1.75
SPG11-206ENST00000558093 SUMO2P61956 95 aaKnown RBP4.11□□□□□ -1.75
SPG11-206ENST00000558093 FMO1Q01740 532 aa4.11□□□□□ -1.75
SPG11-206ENST00000558093 SLC10A2Q12908 348 aaPredicted RBP4.11□□□□□ -1.75
SPG11-206ENST00000558093 CCNIQ14094 377 aa4.11□□□□□ -1.75
SPG11-206ENST00000558093 ARHGEF7Q14155 803 aa4.11□□□□□ -1.75
SPG11-206ENST00000558093 SLC29A2Q14542 456 aa4.11□□□□□ -1.75
SPG11-206ENST00000558093 SLC9A4Q6AI14 798 aa4.11□□□□□ -1.75
SPG11-206ENST00000558093 ZDHHC24Q6UX98 284 aa4.11□□□□□ -1.75
SPG11-206ENST00000558093 DPY19L3Q6ZPD9 716 aa4.11□□□□□ -1.75
SPG11-206ENST00000558093 Q6ZWC4 215 aa4.11□□□□□ -1.75
SPG11-206ENST00000558093 DGKHQ86XP1 1220 aa4.11□□□□□ -1.75
SPG11-206ENST00000558093 CCAR1Q8IX12 1150 aaKnown RBP4.11□□□□□ -1.75
SPG11-206ENST00000558093 YAF2Q8IY57 180 aa4.11□□□□□ -1.75
SPG11-206ENST00000558093 NTN5Q8WTR8 489 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms