RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 A0A1W2PQF6 199 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.17□□□□□ -0.62
TRAV33-201ENST00000557514 FLRT2O43155 660 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 PRPF40AO75400 957 aaKnown RBP11.17□□□□□ -0.62
TRAV33-201ENST00000557514 CDC45O75419 566 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 EIF2S3P41091 472 aaKnown RBP11.17□□□□□ -0.62
TRAV33-201ENST00000557514 TNFRSF4P43489 277 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 KDSRQ06136 332 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 STRN3Q13033 797 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 NFE2Q16621 373 aaPredicted RBP11.17□□□□□ -0.62
TRAV33-201ENST00000557514 DDR2Q16832 855 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 PTPRNQ16849 979 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 WSCD1Q658N2 575 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 FILIP1Q7Z7B0 1213 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 METTL23Q86XA0 190 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 DCP1BQ8IZD4 617 aaKnown RBP11.17□□□□□ -0.62
TRAV33-201ENST00000557514 THEM5Q8N1Q8 247 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 TMEM161BQ8NDZ6 487 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 KCNV2Q8TDN2 545 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 LRRC15Q8TF66 581 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 SETD7Q8WTS6 366 aaKnown RBP11.17□□□□□ -0.62
TRAV33-201ENST00000557514 SPIRE2Q8WWL2 714 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 NXPE2Q96DL1 559 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 PNMA5Q96PV4 448 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 KIF2CQ99661 725 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 LARP6Q9BRS8 491 aaKnown RBP11.17□□□□□ -0.62
TRAV33-201ENST00000557514 NTPCRQ9BSD7 190 aaKnown RBP11.17□□□□□ -0.62
TRAV33-201ENST00000557514 RUSC1Q9BVN2 902 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 TM7SF3Q9NS93 570 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 NFE2L3Q9Y4A8 694 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 PCDHGB2Q9Y5G2 931 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 STK24Q9Y6E0 443 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 TRIP11Q15643 1979 aa11.17□□□□□ -0.62
TRAV33-201ENST00000557514 TEX15Q9BXT5 2789 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 LEFTY2O00292 366 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 CYB561D2O14569 222 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 TLX3O43711 291 aaPredicted RBP11.16□□□□□ -0.62
TRAV33-201ENST00000557514 CILPO75339 1184 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 CER1O95813 267 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 NFICP08651 508 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 OR52Z1P0C646 297 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 MAPTP10636 758 aaKnown RBP11.16□□□□□ -0.62
TRAV33-201ENST00000557514 HLA-EP13747 358 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 HOXB2P14652 356 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 PFKLP17858 780 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 HDCP19113 662 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 NDUFV2P19404 249 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 MCM7P33993 719 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 PDE6CP51160 858 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 RPL10AP62906 217 aaKnown RBP11.16□□□□□ -0.62
TRAV33-201ENST00000557514 KYAT1Q16773 422 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 WDR45BQ5MNZ6 344 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 SYCP2LQ5T4T6 812 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 JADE1Q6IE81 842 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 TRMT11Q7Z4G4 463 aaKnown RBP11.16□□□□□ -0.62
TRAV33-201ENST00000557514 ETFBKMTQ8IXQ9 262 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 RGL4Q8IZJ4 473 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 ADGRG2Q8IZP9 1017 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 SPRYD3Q8NCJ5 442 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 DNASE2BQ8WZ79 361 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 FOXJ1Q92949 421 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 PYM1Q9BRP8 204 aaKnown RBP11.16□□□□□ -0.62
TRAV33-201ENST00000557514 PRDM16Q9HAZ2 1276 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 CD93Q9NPY3 652 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 HCN2Q9UL51 889 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 CYP8B1Q9UNU6 501 aa11.16□□□□□ -0.62
TRAV33-201ENST00000557514 GOLGA4Q13439 2230 aaKnown RBP11.15□□□□□ -0.62
TRAV33-201ENST00000557514 A0A1B0GTW7 788 aa11.15□□□□□ -0.62
TRAV33-201ENST00000557514 BTBD18B2RXH4 712 aa11.15□□□□□ -0.62
TRAV33-201ENST00000557514 DTNBO60941 627 aa11.15□□□□□ -0.62
TRAV33-201ENST00000557514 CTDNEP1O95476 244 aa11.15□□□□□ -0.62
TRAV33-201ENST00000557514 OLFM2O95897 454 aa11.15□□□□□ -0.62
TRAV33-201ENST00000557514 ADH1CP00326 375 aa11.15□□□□□ -0.62
TRAV33-201ENST00000557514 ADH5P11766 374 aa11.15□□□□□ -0.62
TRAV33-201ENST00000557514 CCT6AP40227 531 aaKnown RBP11.15□□□□□ -0.62
TRAV33-201ENST00000557514 TAF6P49848 677 aa11.15□□□□□ -0.62
TRAV33-201ENST00000557514 SLC7A9P82251 487 aa11.15□□□□□ -0.62
TRAV33-201ENST00000557514 ATP2C1P98194 919 aaPredicted RBP11.15□□□□□ -0.62
TRAV33-201ENST00000557514 TSPY1Q01534 308 aa11.15□□□□□ -0.62
TRAV33-201ENST00000557514 BNC1Q01954 994 aa11.15□□□□□ -0.62
TRAV33-201ENST00000557514 RHBDF2Q6PJF5 856 aa11.15□□□□□ -0.62
TRAV33-201ENST00000557514 GPR155Q7Z3F1 870 aa11.15□□□□□ -0.62
TRAV33-201ENST00000557514 MIB1Q86YT6 1006 aa11.15□□□□□ -0.62
TRAV33-201ENST00000557514 DIS3L2Q8IYB7 885 aaKnown RBP11.15□□□□□ -0.62
TRAV33-201ENST00000557514 ZCCHC9Q8N567 271 aaKnown RBP11.15□□□□□ -0.62
TRAV33-201ENST00000557514 ZNF513Q8N8E2 541 aaPredicted RBP11.15□□□□□ -0.62
TRAV33-201ENST00000557514 FSIP1Q8NA03 581 aa11.15□□□□□ -0.62
TRAV33-201ENST00000557514 SNIP1Q8TAD8 396 aaKnown RBP11.15□□□□□ -0.62
TRAV33-201ENST00000557514 WASF1Q92558 559 aa11.15□□□□□ -0.62
TRAV33-201ENST00000557514 KCNN1Q92952 543 aa11.15□□□□□ -0.62
TRAV33-201ENST00000557514 PKMYT1Q99640 499 aa11.15□□□□□ -0.62
TRAV33-201ENST00000557514 HNRNPABQ99729 332 aaKnown RBP11.15□□□□□ -0.62
TRAV33-201ENST00000557514 GAREM1Q9H706 876 aa11.15□□□□□ -0.62
TRAV33-201ENST00000557514 DDX19AQ9NUU7 478 aaKnown RBP11.15□□□□□ -0.62
TRAV33-201ENST00000557514 ORC3Q9UBD5 711 aaPredicted RBP11.15□□□□□ -0.62
TRAV33-201ENST00000557514 KIAA1024Q9UPX6 916 aa11.15□□□□□ -0.62
TRAV33-201ENST00000557514 ERVH48-1M5A8F1 160 aa11.14□□□□□ -0.63
TRAV33-201ENST00000557514 SLC9A3R1O14745 358 aaPredicted RBP11.14□□□□□ -0.63
TRAV33-201ENST00000557514 SCAMP3O14828 347 aaKnown RBP11.14□□□□□ -0.63
TRAV33-201ENST00000557514 OGTO15294 1046 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms