RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 MON1AQ86VX9 555 aa13.24□□□□□ -0.29
SLIRP-209ENST00000557342 IRF2BP1Q8IU81 584 aa13.24□□□□□ -0.29
SLIRP-209ENST00000557342 ARID3BQ8IVW6 561 aaPredicted RBP13.24□□□□□ -0.29
SLIRP-209ENST00000557342 PPM1KQ8N3J5 372 aa13.24□□□□□ -0.29
SLIRP-209ENST00000557342 ST13P5Q8NFI4 369 aaPredicted RBP13.24□□□□□ -0.29
SLIRP-209ENST00000557342 LMO3Q8TAP4 145 aa13.24□□□□□ -0.29
SLIRP-209ENST00000557342 ENOX1Q8TC92 643 aaKnown RBP13.24□□□□□ -0.29
SLIRP-209ENST00000557342 FAM81BQ96LP2 452 aa13.24□□□□□ -0.29
SLIRP-209ENST00000557342 HEXIM2Q96MH2 286 aaKnown RBP13.24□□□□□ -0.29
SLIRP-209ENST00000557342 SLITRK1Q96PX8 696 aa13.24□□□□□ -0.29
SLIRP-209ENST00000557342 ARID3AQ99856 593 aa13.24□□□□□ -0.29
SLIRP-209ENST00000557342 TRMT61BQ9BVS5 477 aaKnown RBP13.24□□□□□ -0.29
SLIRP-209ENST00000557342 CSNK1G1Q9HCP0 422 aa13.24□□□□□ -0.29
SLIRP-209ENST00000557342 FAM49BQ9NUQ9 324 aa13.24□□□□□ -0.29
SLIRP-209ENST00000557342 TRPM5Q9NZQ8 1165 aa13.24□□□□□ -0.29
SLIRP-209ENST00000557342 KIF26AQ9ULI4 1882 aaPredicted RBP13.23□□□□□ -0.29
SLIRP-209ENST00000557342 GTPBP10A4D1E9 387 aaKnown RBP13.23□□□□□ -0.29
SLIRP-209ENST00000557342 HEPACAM2A8MVW5 462 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 YWHAQP27348 245 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 ADORA2BP29275 332 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 AVPR1AP37288 418 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 CACNA2D1P54289 1103 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 MAP3K7CLP57077 242 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 GPC5P78333 572 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 GCNT1Q02742 428 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 VITQ6UXI7 678 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 HFE2Q6ZVN8 426 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 MFSD6LQ8IWD5 586 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 SUGP1Q8IWZ8 645 aaKnown RBP13.23□□□□□ -0.29
SLIRP-209ENST00000557342 YAF2Q8IY57 180 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 CMTM8Q8IZV2 173 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 MAB21L3Q8N8X9 362 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 SLC4A11Q8NBS3 891 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 PDZD8Q8NEN9 1154 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 OVCA2Q8WZ82 227 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 KCNK16Q96T55 309 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 SLC46A2Q9BY10 475 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 PLA2G2FQ9BZM2 168 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 INTS2Q9H0H0 1204 aaKnown RBP13.23□□□□□ -0.29
SLIRP-209ENST00000557342 MFSD1Q9H3U5 465 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 KIF9Q9HAQ2 790 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 PNPLA8Q9NP80 782 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 TMEM30AQ9NV96 361 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 GCNT4Q9P109 453 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 KIAA1257Q9ULG3 409 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 KMT2EQ8IZD2 1858 aa13.23□□□□□ -0.29
SLIRP-209ENST00000557342 MIA3Q5JRA6 1907 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 TRAV19A0A0A6YYK7 116 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 TADA3O75528 432 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 USP17L7P0C7H9 530 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 EEF1GP26641 437 aaKnown RBP13.22□□□□□ -0.29
SLIRP-209ENST00000557342 VIPR2P41587 438 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 SLC5A3P53794 718 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 SLC8A3P57103 927 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 USP46P62068 366 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 PPP1R26Q5T8A7 1209 aaPredicted RBP13.22□□□□□ -0.29
SLIRP-209ENST00000557342 ARHGAP17Q68EM7 881 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 TXNDC8Q6A555 127 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 GBP6Q6ZN66 633 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 CLEC20AQ6ZU45 233 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 ENOSF1Q7L5Y1 443 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 SIX5Q8N196 739 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 FBXL6Q8N531 539 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 CELF5Q8N6W0 485 aaKnown RBP13.22□□□□□ -0.29
SLIRP-209ENST00000557342 DNASE1L2Q92874 299 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 IRF7Q92985 503 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 JAKMIP2Q96AA8 810 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 SHDQ96IW2 340 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 SMOQ99835 787 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 FBXO44Q9H4M3 255 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 BRD9Q9H8M2 597 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 TRPC7Q9HCX4 862 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 TMEM63CQ9P1W3 806 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 CA14Q9ULX7 337 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 NFE2L3Q9Y4A8 694 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 PCDHB4Q9Y5E5 795 aa13.22□□□□□ -0.29
SLIRP-209ENST00000557342 NCANO14594 1321 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 KCNJ18B7U540 433 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 TNFRSF10BO14763 440 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 ZNF263O14978 683 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 CHADO15335 359 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 TPM2P07951 284 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 PAEPP09466 180 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 VDRP11473 427 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 NPR3P17342 541 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 RFX1P22670 979 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 GDI1P31150 447 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 IFRD2Q12894 506 aaPredicted RBP13.21□□□□□ -0.29
SLIRP-209ENST00000557342 TAF10Q12962 218 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 GRM2Q14416 872 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 KCNJ12Q14500 433 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 ZNF268Q14587 947 aaPredicted RBP13.21□□□□□ -0.29
SLIRP-209ENST00000557342 EXOC3L4Q17RC7 722 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 VWA3BQ502W6 1294 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 SGO2Q562F6 1265 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 SMYD5Q6GMV2 418 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 TMEM270Q6UE05 265 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 RRAGAQ7L523 313 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 UBR7Q8N806 425 aa13.21□□□□□ -0.29
SLIRP-209ENST00000557342 ZMIZ2Q8NF64 920 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms