RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 TMEM119Q4V9L6 283 aa13.48□□□□□ -0.25
PSEN1-221ENST00000557293 INTS6LQ5JSJ4 861 aaKnown RBP13.48□□□□□ -0.25
PSEN1-221ENST00000557293 SLCO6A1Q86UG4 719 aa13.48□□□□□ -0.25
PSEN1-221ENST00000557293 SLC41A1Q8IVJ1 513 aa13.48□□□□□ -0.25
PSEN1-221ENST00000557293 KCTD17Q8N5Z5 321 aa13.48□□□□□ -0.25
PSEN1-221ENST00000557293 PNPLA1Q8N8W4 532 aa13.48□□□□□ -0.25
PSEN1-221ENST00000557293 HMGB4Q8WW32 186 aa13.48□□□□□ -0.25
PSEN1-221ENST00000557293 PNKPQ96T60 521 aa13.48□□□□□ -0.25
PSEN1-221ENST00000557293 REEP2Q9BRK0 252 aa13.48□□□□□ -0.25
PSEN1-221ENST00000557293 GTPBP2Q9BX10 602 aaKnown RBP13.48□□□□□ -0.25
PSEN1-221ENST00000557293 KCND2Q9NZV8 630 aa13.48□□□□□ -0.25
PSEN1-221ENST00000557293 MYO18AQ92614 2054 aaKnown RBP13.48□□□□□ -0.25
PSEN1-221ENST00000557293 FREM2Q5SZK8 3169 aa13.47□□□□□ -0.25
PSEN1-221ENST00000557293 LAD1O00515 517 aa13.47□□□□□ -0.25
PSEN1-221ENST00000557293 ARHGAP33O14559 1287 aa13.47□□□□□ -0.25
PSEN1-221ENST00000557293 GABRDO14764 452 aa13.47□□□□□ -0.25
PSEN1-221ENST00000557293 OPHN1O60890 802 aa13.47□□□□□ -0.25
PSEN1-221ENST00000557293 KAT7O95251 611 aa13.47□□□□□ -0.25
PSEN1-221ENST00000557293 RDXP35241 583 aaKnown RBP13.47□□□□□ -0.25
PSEN1-221ENST00000557293 DPP6P42658 865 aa13.47□□□□□ -0.25
PSEN1-221ENST00000557293 NEK4P51957 841 aa13.47□□□□□ -0.25
PSEN1-221ENST00000557293 USP46P62068 366 aa13.47□□□□□ -0.25
PSEN1-221ENST00000557293 TSPY1Q01534 308 aa13.47□□□□□ -0.25
PSEN1-221ENST00000557293 TRIP6Q15654 476 aaKnown RBP13.47□□□□□ -0.25
PSEN1-221ENST00000557293 ZRSR1Q15695 479 aaKnown RBP13.47□□□□□ -0.25
PSEN1-221ENST00000557293 SV2CQ496J9 727 aa13.47□□□□□ -0.25
PSEN1-221ENST00000557293 CFAP221Q4G0U5 840 aa13.47□□□□□ -0.25
PSEN1-221ENST00000557293 HSF5Q4G112 596 aaPredicted RBP13.47□□□□□ -0.25
PSEN1-221ENST00000557293 DTHD1Q6ZMT9 781 aa13.47□□□□□ -0.25
PSEN1-221ENST00000557293 FILIP1Q7Z7B0 1213 aa13.47□□□□□ -0.25
PSEN1-221ENST00000557293 HDDC3Q8N4P3 179 aa13.47□□□□□ -0.25
PSEN1-221ENST00000557293 CEP76Q8TAP6 659 aa13.47□□□□□ -0.25
PSEN1-221ENST00000557293 HNRNPLLQ8WVV9 542 aaKnown RBP13.47□□□□□ -0.25
PSEN1-221ENST00000557293 SPACA7Q96KW9 195 aa13.47□□□□□ -0.25
PSEN1-221ENST00000557293 CD248Q9HCU0 757 aa13.47□□□□□ -0.25
PSEN1-221ENST00000557293 POLMQ9NP87 494 aaPredicted RBP13.47□□□□□ -0.25
PSEN1-221ENST00000557293 DDX43Q9NXZ2 648 aaKnown RBP13.47□□□□□ -0.25
PSEN1-221ENST00000557293 ODF2LQ9ULJ1 636 aa13.47□□□□□ -0.25
PSEN1-221ENST00000557293 CIZ1Q9ULV3 898 aaPredicted RBP13.47□□□□□ -0.25
PSEN1-221ENST00000557293 NOL7Q9UMY1 257 aaKnown RBP13.47□□□□□ -0.25
PSEN1-221ENST00000557293 MYOFQ9NZM1 2061 aa13.47□□□□□ -0.25
PSEN1-221ENST00000557293 TCHHQ07283 1943 aa13.47□□□□□ -0.25
PSEN1-221ENST00000557293 CEP192Q8TEP8 1941 aa13.47□□□□□ -0.25
PSEN1-221ENST00000557293 ASXL3Q9C0F0 2248 aa13.46□□□□□ -0.25
PSEN1-221ENST00000557293 MYMKA6NI61 221 aa13.46□□□□□ -0.25
PSEN1-221ENST00000557293 ATP2C2O75185 946 aa13.46□□□□□ -0.25
PSEN1-221ENST00000557293 GABRG2P18507 467 aa13.46□□□□□ -0.25
PSEN1-221ENST00000557293 ADSSP30520 456 aa13.46□□□□□ -0.25
PSEN1-221ENST00000557293 EIF2DP41214 584 aaKnown RBP13.46□□□□□ -0.25
PSEN1-221ENST00000557293 TNFRSF4P43489 277 aa13.46□□□□□ -0.25
PSEN1-221ENST00000557293 SLC7A9P82251 487 aa13.46□□□□□ -0.25
PSEN1-221ENST00000557293 ATP2C1P98194 919 aaPredicted RBP13.46□□□□□ -0.25
PSEN1-221ENST00000557293 POU5F1Q01860 360 aaKnown RBP13.46□□□□□ -0.25
PSEN1-221ENST00000557293 ZNF33AQ06730 810 aa13.46□□□□□ -0.25
PSEN1-221ENST00000557293 BYSLQ13895 437 aaKnown RBP13.46□□□□□ -0.25
PSEN1-221ENST00000557293 HNRNPDQ14103 355 aaKnown RBP13.46□□□□□ -0.25
PSEN1-221ENST00000557293 EOGTQ5NDL2 527 aa13.46□□□□□ -0.25
PSEN1-221ENST00000557293 FAM171BQ6P995 826 aa13.46□□□□□ -0.25
PSEN1-221ENST00000557293 KIAA1958Q8N8K9 716 aa13.46□□□□□ -0.25
PSEN1-221ENST00000557293 ZSWIM2Q8NEG5 633 aa13.46□□□□□ -0.25
PSEN1-221ENST00000557293 MDM1Q8TC05 714 aa13.46□□□□□ -0.25
PSEN1-221ENST00000557293 FAM84AQ96KN4 292 aa13.46□□□□□ -0.25
PSEN1-221ENST00000557293 CCDC86Q9H6F5 360 aaKnown RBP13.46□□□□□ -0.25
PSEN1-221ENST00000557293 CACNA2D2Q9NY47 1150 aa13.46□□□□□ -0.25
PSEN1-221ENST00000557293 HELZP42694 1942 aaKnown RBP13.45□□□□□ -0.26
PSEN1-221ENST00000557293 TCRBV21S2A2A0A5A6 115 aa13.45□□□□□ -0.26
PSEN1-221ENST00000557293 K7ENM7 598 aa13.45□□□□□ -0.26
PSEN1-221ENST00000557293 SCAMP3O14828 347 aaKnown RBP13.45□□□□□ -0.26
PSEN1-221ENST00000557293 TRAK2O60296 914 aa13.45□□□□□ -0.26
PSEN1-221ENST00000557293 CBFA2T3O75081 653 aa13.45□□□□□ -0.26
PSEN1-221ENST00000557293 OLFM2O95897 454 aa13.45□□□□□ -0.26
PSEN1-221ENST00000557293 FTH1P19P0C7X4 201 aa13.45□□□□□ -0.26
PSEN1-221ENST00000557293 GRIA2P42262 883 aa13.45□□□□□ -0.26
PSEN1-221ENST00000557293 MAGEA11P43364 429 aa13.45□□□□□ -0.26
PSEN1-221ENST00000557293 ATXN3P54252 364 aaPredicted RBP13.45□□□□□ -0.26
PSEN1-221ENST00000557293 KCNB1Q14721 858 aa13.45□□□□□ -0.26
PSEN1-221ENST00000557293 ADALQ6DHV7 355 aa13.45□□□□□ -0.26
PSEN1-221ENST00000557293 LIMS2Q7Z4I7 341 aa13.45□□□□□ -0.26
PSEN1-221ENST00000557293 CCDC83Q8IWF9 413 aa13.45□□□□□ -0.26
PSEN1-221ENST00000557293 SCN4BQ8IWT1 228 aa13.45□□□□□ -0.26
PSEN1-221ENST00000557293 MYCT1Q8N699 235 aa13.45□□□□□ -0.26
PSEN1-221ENST00000557293 C1orf127Q8N9H9 656 aa13.45□□□□□ -0.26
PSEN1-221ENST00000557293 FSIP1Q8NA03 581 aa13.45□□□□□ -0.26
PSEN1-221ENST00000557293 SPATA18Q8TC71 538 aa13.45□□□□□ -0.26
PSEN1-221ENST00000557293 LLPHQ9BRT6 129 aaKnown RBP13.45□□□□□ -0.26
PSEN1-221ENST00000557293 BLOC1S4Q9NUP1 217 aa13.45□□□□□ -0.26
PSEN1-221ENST00000557293 GDAP2Q9NXN4 497 aa13.45□□□□□ -0.26
PSEN1-221ENST00000557293 BCCIPQ9P287 314 aaKnown RBP eCLIP13.45□□□□□ -0.26
PSEN1-221ENST00000557293 AGO2Q9UKV8 859 aaKnown RBP13.45□□□□□ -0.26
PSEN1-221ENST00000557293 AGAP1Q9UPQ3 857 aa13.45□□□□□ -0.26
PSEN1-221ENST00000557293 RAXQ9Y2V3 346 aa13.45□□□□□ -0.26
PSEN1-221ENST00000557293 APC2O95996 2303 aa13.45□□□□□ -0.26
PSEN1-221ENST00000557293 IGHV1OR15-9A0A0B4J2B8 117 aa13.44□□□□□ -0.26
PSEN1-221ENST00000557293 ZNF840PA6NDX5 716 aa13.44□□□□□ -0.26
PSEN1-221ENST00000557293 AP5Z1O43299 807 aa13.44□□□□□ -0.26
PSEN1-221ENST00000557293 SEC24BO95487 1268 aa13.44□□□□□ -0.26
PSEN1-221ENST00000557293 APODP05090 189 aa13.44□□□□□ -0.26
PSEN1-221ENST00000557293 PFKLP17858 780 aa13.44□□□□□ -0.26
PSEN1-221ENST00000557293 SCP2P22307 547 aa13.44□□□□□ -0.26
PSEN1-221ENST00000557293 LMO2P25791 158 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms