RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 MRPL10Q7Z7H8 261 aaKnown RBP5.71□□□□□ -1.5
ATXN3-244ENST00000556898 ECHDC2Q86YB7 292 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 VSTM4Q8IW00 320 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 ARHGEF19Q8IW93 802 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 ADHFE1Q8IWW8 467 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 GSTCDQ8NEC7 633 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 LMO3Q8TAP4 145 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 CPLX3Q8WVH0 158 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 SEPT8Q92599 483 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 KAT5Q92993 513 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 PABPC5Q96DU9 382 aaKnown RBP5.71□□□□□ -1.5
ATXN3-244ENST00000556898 MRPL38Q96DV4 380 aaKnown RBP5.71□□□□□ -1.5
ATXN3-244ENST00000556898 FNBP1Q96RU3 617 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 GAD1Q99259 594 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 ADPGKQ9BRR6 497 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 CCDC94Q9BW85 323 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-244ENST00000556898 MTMR12Q9C0I1 747 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 LACRTQ9GZZ8 138 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 SIX2Q9NPC8 291 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 CHST12Q9NRB3 414 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 RGS18Q9NS28 235 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 INPP5FQ9Y2H2 1132 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 SIK3Q9Y2K2 1263 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 INSL6Q9Y581 213 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 SQORQ9Y6N5 450 aa5.71□□□□□ -1.5
ATXN3-244ENST00000556898 XIRP2A4UGR9 3374 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 A0A0U1RQF3 1178 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 SMIM28A0A1B0GU29 152 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 FAM170AA1A519 330 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 HMX2A2RU54 273 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 F8W810 466 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 EREGO14944 169 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 KIAA0391O15091 583 aaKnown RBP5.7□□□□□ -1.5
ATXN3-244ENST00000556898 CBFA2T2O43439 604 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 OFD1O75665 1012 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 NOL4O94818 638 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 HLA-DRAP01903 254 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 ITGB3P05106 788 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 PON1P27169 355 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 CD68P34810 354 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-244ENST00000556898 DEKP35659 375 aaKnown RBP5.7□□□□□ -1.5
ATXN3-244ENST00000556898 MXI1P50539 228 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 MYL6P60660 151 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 FAM189BP81408 668 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 PPP2R3AQ06190 1150 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 TBX2Q13207 712 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-244ENST00000556898 ORC1Q13415 861 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 BIRC3Q13489 604 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 COL19A1Q14993 1142 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 PCBP1Q15365 356 aaKnown RBP eCLIP5.7□□□□□ -1.5
ATXN3-244ENST00000556898 ZACNQ401N2 412 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 TIGD5Q53EQ6 642 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 CLLU1OSQ5K130 101 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 FKBP15Q5T1M5 1219 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 KRT39Q6A163 491 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 IQCEQ6IPM2 695 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 ACAD11Q709F0 780 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 RRAGAQ7L523 313 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 TRAPPC11Q7Z392 1133 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 TRIM42Q8IWZ5 723 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 DRC7Q8IY82 874 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 ANKRD20A12PQ8NF67 263 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 CXorf38Q8TB03 319 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 EDAQ92838 391 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 CCDC51Q96ER9 411 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 MRFAP1L1Q96HT8 127 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 FAM46AQ96IP4 442 aaKnown RBP5.7□□□□□ -1.5
ATXN3-244ENST00000556898 ZNF830Q96NB3 372 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-244ENST00000556898 SAMD11Q96NU1 681 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 PAAF1Q9BRP4 392 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 INTS2Q9H0H0 1204 aaKnown RBP5.7□□□□□ -1.5
ATXN3-244ENST00000556898 MUC3BQ9H195 1237 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 IRF2BPLQ9H1B7 796 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 GANQ9H2C0 597 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 C7orf69Q9H7B7 122 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 APOBEC3GQ9HC16 384 aaKnown RBP5.7□□□□□ -1.5
ATXN3-244ENST00000556898 KIAA1586Q9HCI6 787 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 TMEM8AQ9HCN3 771 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 NLRC4Q9NPP4 1024 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 FAM207AQ9NSI2 230 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-244ENST00000556898 GCNT4Q9P109 453 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 KANSL3Q9P2N6 904 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 SIX4Q9UIU6 781 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 FHOD1Q9Y613 1164 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 TANC1Q9C0D5 1861 aa5.7□□□□□ -1.5
ATXN3-244ENST00000556898 ARL5CA6NH57 179 aa5.69□□□□□ -1.5
ATXN3-244ENST00000556898 CASTOR2A6NHX0 329 aa5.69□□□□□ -1.5
ATXN3-244ENST00000556898 H3BNC9 293 aa5.69□□□□□ -1.5
ATXN3-244ENST00000556898 EIF1AYO14602 144 aaKnown RBP5.69□□□□□ -1.5
ATXN3-244ENST00000556898 HCRTO43612 131 aa5.69□□□□□ -1.5
ATXN3-244ENST00000556898 ADAM11O75078 769 aa5.69□□□□□ -1.5
ATXN3-244ENST00000556898 ZNF623O75123 536 aa5.69□□□□□ -1.5
ATXN3-244ENST00000556898 DDHD2O94830 711 aa5.69□□□□□ -1.5
ATXN3-244ENST00000556898 IL18RAPO95256 599 aa5.69□□□□□ -1.5
ATXN3-244ENST00000556898 GYPCP04921 128 aa5.69□□□□□ -1.5
ATXN3-244ENST00000556898 TPM2P07951 284 aa5.69□□□□□ -1.5
ATXN3-244ENST00000556898 KRT19P08727 400 aa5.69□□□□□ -1.5
ATXN3-244ENST00000556898 TMEM191BP0C7N4 346 aa5.69□□□□□ -1.5
ATXN3-244ENST00000556898 SPINK2P20155 84 aa5.69□□□□□ -1.5
ATXN3-244ENST00000556898 POLR2BP30876 1174 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms