RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 TTC8Q8TAM2 541 aa11.02□□□□□ -0.65
SNX6-208ENST00000556712 GPT2Q8TD30 523 aa11.02□□□□□ -0.65
SNX6-208ENST00000556712 DEPDC1BQ8WUY9 529 aa11.02□□□□□ -0.65
SNX6-208ENST00000556712 MRPS31Q92665 395 aaKnown RBP11.02□□□□□ -0.65
SNX6-208ENST00000556712 JAKMIP2Q96AA8 810 aa11.02□□□□□ -0.65
SNX6-208ENST00000556712 SMARCD1Q96GM5 515 aa11.02□□□□□ -0.65
SNX6-208ENST00000556712 SPATA17Q96L03 361 aa11.02□□□□□ -0.65
SNX6-208ENST00000556712 C8orf48Q96LL4 319 aa11.02□□□□□ -0.65
SNX6-208ENST00000556712 MYRFLQ96LU7 910 aa11.02□□□□□ -0.65
SNX6-208ENST00000556712 SMOQ99835 787 aa11.02□□□□□ -0.65
SNX6-208ENST00000556712 CYP3A43Q9HB55 503 aa11.02□□□□□ -0.65
SNX6-208ENST00000556712 METTL14Q9HCE5 456 aaKnown RBP11.02□□□□□ -0.65
SNX6-208ENST00000556712 DMAP1Q9NPF5 467 aaPredicted RBP11.02□□□□□ -0.65
SNX6-208ENST00000556712 UXTQ9UBK9 157 aaPredicted RBP11.02□□□□□ -0.65
SNX6-208ENST00000556712 ATP8B3O60423 1300 aa11.02□□□□□ -0.65
SNX6-208ENST00000556712 SHISA7A6NL88 538 aa11.01□□□□□ -0.65
SNX6-208ENST00000556712 ARNTLO00327 626 aa11.01□□□□□ -0.65
SNX6-208ENST00000556712 ZNF263O14978 683 aa11.01□□□□□ -0.65
SNX6-208ENST00000556712 DCNP07585 359 aaKnown RBP11.01□□□□□ -0.65
SNX6-208ENST00000556712 AVPR1AP37288 418 aa11.01□□□□□ -0.65
SNX6-208ENST00000556712 SOX9P48436 509 aa11.01□□□□□ -0.65
SNX6-208ENST00000556712 SLC5A3P53794 718 aa11.01□□□□□ -0.65
SNX6-208ENST00000556712 PFKPQ01813 784 aa11.01□□□□□ -0.65
SNX6-208ENST00000556712 FCHO2Q0JRZ9 810 aa11.01□□□□□ -0.65
SNX6-208ENST00000556712 UBXN2BQ14CS0 331 aa11.01□□□□□ -0.65
SNX6-208ENST00000556712 DPCR1Q3MIW9 517 aa11.01□□□□□ -0.65
SNX6-208ENST00000556712 WDR44Q5JSH3 913 aa11.01□□□□□ -0.65
SNX6-208ENST00000556712 GPRIN1Q7Z2K8 1008 aa11.01□□□□□ -0.65
SNX6-208ENST00000556712 TRIM59Q8IWR1 403 aa11.01□□□□□ -0.65
SNX6-208ENST00000556712 YAF2Q8IY57 180 aa11.01□□□□□ -0.65
SNX6-208ENST00000556712 CRYBG2Q8N1P7 616 aa11.01□□□□□ -0.65
SNX6-208ENST00000556712 ARL14EPQ8N8R7 260 aaPredicted RBP11.01□□□□□ -0.65
SNX6-208ENST00000556712 PJA1Q8NG27 643 aa11.01□□□□□ -0.65
SNX6-208ENST00000556712 DNASE1L2Q92874 299 aa11.01□□□□□ -0.65
SNX6-208ENST00000556712 USP13Q92995 863 aaPredicted RBP11.01□□□□□ -0.65
SNX6-208ENST00000556712 GBP4Q96PP9 640 aa11.01□□□□□ -0.65
SNX6-208ENST00000556712 CYP2S1Q96SQ9 504 aa11.01□□□□□ -0.65
SNX6-208ENST00000556712 TTLL2Q9BWV7 592 aa11.01□□□□□ -0.65
SNX6-208ENST00000556712 NT5C1AQ9BXI3 368 aa11.01□□□□□ -0.65
SNX6-208ENST00000556712 SRRTQ9BXP5 876 aaKnown RBP11.01□□□□□ -0.65
SNX6-208ENST00000556712 CISHQ9NSE2 258 aa11.01□□□□□ -0.65
SNX6-208ENST00000556712 MTF2Q9Y483 593 aaPredicted RBP11.01□□□□□ -0.65
SNX6-208ENST00000556712 MUC6Q6W4X9 2439 aa11□□□□□ -0.65
SNX6-208ENST00000556712 WDFY4Q6ZS81 3184 aa11□□□□□ -0.65
SNX6-208ENST00000556712 CKMP06732 381 aa11□□□□□ -0.65
SNX6-208ENST00000556712 FAM200BP0CF97 657 aa11□□□□□ -0.65
SNX6-208ENST00000556712 GLULP15104 373 aa11□□□□□ -0.65
SNX6-208ENST00000556712 DDX6P26196 483 aaKnown RBP eCLIP11□□□□□ -0.65
SNX6-208ENST00000556712 TARSP26639 723 aaKnown RBP11□□□□□ -0.65
SNX6-208ENST00000556712 CLCN5P51795 746 aa11□□□□□ -0.65
SNX6-208ENST00000556712 MAP3K7CLP57077 242 aa11□□□□□ -0.65
SNX6-208ENST00000556712 STARD6P59095 220 aa11□□□□□ -0.65
SNX6-208ENST00000556712 TNK2Q07912 1038 aa11□□□□□ -0.65
SNX6-208ENST00000556712 TCF15Q12870 199 aa11□□□□□ -0.65
SNX6-208ENST00000556712 TAF10Q12962 218 aa11□□□□□ -0.65
SNX6-208ENST00000556712 CUL2Q13617 745 aa11□□□□□ -0.65
SNX6-208ENST00000556712 TRIM68Q6AZZ1 485 aa11□□□□□ -0.65
SNX6-208ENST00000556712 PHLDB3Q6NSJ2 640 aa11□□□□□ -0.65
SNX6-208ENST00000556712 FOXR2Q6PJQ5 311 aa11□□□□□ -0.65
SNX6-208ENST00000556712 MON1AQ86VX9 555 aa11□□□□□ -0.65
SNX6-208ENST00000556712 CCDC105Q8IYK2 499 aa11□□□□□ -0.65
SNX6-208ENST00000556712 SCAMP5Q8TAC9 235 aa11□□□□□ -0.65
SNX6-208ENST00000556712 BPIFB1Q8TDL5 484 aa11□□□□□ -0.65
SNX6-208ENST00000556712 IRF7Q92985 503 aa11□□□□□ -0.65
SNX6-208ENST00000556712 KAT5Q92993 513 aa11□□□□□ -0.65
SNX6-208ENST00000556712 FBXO32Q969P5 355 aa11□□□□□ -0.65
SNX6-208ENST00000556712 CNOT6LQ96LI5 555 aaKnown RBP11□□□□□ -0.65
SNX6-208ENST00000556712 DDX23Q9BUQ8 820 aaKnown RBP11□□□□□ -0.65
SNX6-208ENST00000556712 FAM86C1Q9NVL1 165 aa11□□□□□ -0.65
SNX6-208ENST00000556712 RWDD2AQ9UIY3 292 aa11□□□□□ -0.65
SNX6-208ENST00000556712 COQ4Q9Y3A0 265 aa11□□□□□ -0.65
SNX6-208ENST00000556712 PIAS3Q9Y6X2 628 aa11□□□□□ -0.65
SNX6-208ENST00000556712 TRAV19A0A0A6YYK7 116 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 KANSL1LA0AUZ9 987 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 TNFRSF10BO14763 440 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 CHADO15335 359 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 GALR2O43603 387 aaPredicted RBP10.99□□□□□ -0.65
SNX6-208ENST00000556712 ABL1P00519 1130 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 YWHAQP27348 245 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 WEE1P30291 646 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 RAD23BP54727 409 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 PRKCQQ04759 706 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 KCNH2Q12809 1159 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 USP4Q13107 963 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 ZNF77Q15935 545 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 HSP90AA4PQ58FG1 418 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 PPP1R26Q5T8A7 1209 aaPredicted RBP10.99□□□□□ -0.65
SNX6-208ENST00000556712 CLEC20AQ6ZU45 233 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 CREBRFQ8IUR6 639 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 ARHGEF19Q8IW93 802 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 NUP93Q8N1F7 819 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 CELF5Q8N6W0 485 aaKnown RBP10.99□□□□□ -0.65
SNX6-208ENST00000556712 UBR7Q8N806 425 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 SLC4A11Q8NBS3 891 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 E2F7Q96AV8 911 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 CYFIP2Q96F07 1278 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 CEP295NLQ96MC4 621 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 LTB4R2Q9NPC1 389 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 TDP1Q9NUW8 608 aa10.99□□□□□ -0.65
SNX6-208ENST00000556712 OBP2AQ9NY56 170 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms