RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 C4orf50Q6ZRC1 276 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 Q6ZS46 218 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 EEPD1Q7L9B9 569 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 MAMDC2Q7Z304 686 aaPredicted RBP6.49□□□□□ -1.37
TDP1-215ENST00000556498 C12orf40Q86WS4 652 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 GALNT13Q8IUC8 556 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 PM20D2Q8IYS1 436 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 REXO1Q8N1G1 1221 aaKnown RBP6.49□□□□□ -1.37
TDP1-215ENST00000556498 ZNF619Q8N2I2 560 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 LRRC71Q8N4P6 559 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 MAGEB6Q8N7X4 407 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 C12orf50Q8NA57 414 aaPredicted RBP6.49□□□□□ -1.37
TDP1-215ENST00000556498 MARCH10Q8NA82 808 aaPredicted RBP6.49□□□□□ -1.37
TDP1-215ENST00000556498 IL17RDQ8NFM7 739 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.49□□□□□ -1.37
TDP1-215ENST00000556498 GOT1L1Q8NHS2 421 aaPredicted RBP6.49□□□□□ -1.37
TDP1-215ENST00000556498 FANK1Q8TC84 345 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 NELFBQ8WX92 580 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 ELMO3Q96BJ8 720 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 IQCDQ96DY2 449 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 STAMBPL1Q96FJ0 436 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 ZNF570Q96NI8 536 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 OPALINQ96PE5 141 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 DDX50Q9BQ39 737 aaKnown RBP6.49□□□□□ -1.37
TDP1-215ENST00000556498 MLPHQ9BV36 600 aaPredicted RBP6.49□□□□□ -1.37
TDP1-215ENST00000556498 PACSIN1Q9BY11 444 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 KLHL25Q9H0H3 589 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 ZCWPW1Q9H0M4 648 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 TNKS2Q9H2K2 1166 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 DPH5Q9H2P9 285 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 STN1Q9H668 368 aaKnown RBP6.49□□□□□ -1.37
TDP1-215ENST00000556498 TRPV4Q9HBA0 871 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 WDR6Q9NNW5 1121 aaKnown RBP6.49□□□□□ -1.37
TDP1-215ENST00000556498 PLCB1Q9NQ66 1216 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 GPRC5BQ9NZH0 403 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 NFKBIL1Q9UBC1 381 aaPredicted RBP6.49□□□□□ -1.37
TDP1-215ENST00000556498 FAF1Q9UNN5 650 aaPredicted RBP6.49□□□□□ -1.37
TDP1-215ENST00000556498 SLC8A2Q9UPR5 921 aa6.49□□□□□ -1.37
TDP1-215ENST00000556498 PLEKHH2Q8IVE3 1493 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 TEX51A0A1B0GUA7 166 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 TRIM75PA6NK02 468 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 CAPN14A8MX76 684 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 NDUFS8O00217 210 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 BTN3A1O00481 513 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 AREL1O15033 823 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 HNRNPRO43390 633 aaKnown RBP6.48□□□□□ -1.37
TDP1-215ENST00000556498 ATP5HO75947 161 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 PDE5AO76074 875 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 HRGP04196 525 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 POLR2MP0CAP2 368 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 ADH5P11766 374 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 HCLS1P14317 486 aaPredicted RBP6.48□□□□□ -1.37
TDP1-215ENST00000556498 TFEBP19484 476 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 CAPN3P20807 821 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 ATP6V1C1P21283 382 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 SLC26A3P40879 764 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 HADHAP40939 763 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 ZNF165P49910 485 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 CLCN4P51793 760 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 STAT2P52630 851 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 SLC12A2P55011 1212 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 MYL6P60660 151 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 EEF1A1P68104 462 aaKnown RBP6.48□□□□□ -1.37
TDP1-215ENST00000556498 OCA2Q04671 838 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 EEF1A2Q05639 463 aaKnown RBP6.48□□□□□ -1.37
TDP1-215ENST00000556498 IFIT5Q13325 482 aaKnown RBP6.48□□□□□ -1.37
TDP1-215ENST00000556498 GIT2Q14161 759 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 ADGRE1Q14246 886 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 LRIT3Q3SXY7 679 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 AARDQ4LEZ3 155 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 CCDC58Q4VC31 144 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 TTMPQ5BVD1 217 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 EEF1A1P5Q5VTE0 462 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 BTBD8Q5XKL5 378 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 FDX2Q6P4F2 183 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 ERICH5Q6P6B1 374 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 AAGABQ6PD74 315 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 RUFY4Q6ZNE9 571 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 PIK3AP1Q6ZUJ8 805 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 RAB11FIP2Q7L804 512 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 FASTKD5Q7L8L6 764 aaKnown RBP6.48□□□□□ -1.37
TDP1-215ENST00000556498 TRPM8Q7Z2W7 1104 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 DPP9Q86TI2 863 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 DNAAF5Q86Y56 855 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 IFT20Q8IY31 132 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 DIS3L2Q8IYB7 885 aaKnown RBP6.48□□□□□ -1.37
TDP1-215ENST00000556498 LIX1Q8N485 282 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 NATD1Q8N6N6 113 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 ZNF680Q8NEM1 530 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 ST13P5Q8NFI4 369 aaPredicted RBP6.48□□□□□ -1.37
TDP1-215ENST00000556498 IL17REQ8NFR9 667 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 HCAR2Q8TDS4 363 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 GANCQ8TET4 914 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 WFDC12Q8WWY7 111 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 ABTB1Q969K4 478 aaPredicted RBP6.48□□□□□ -1.37
TDP1-215ENST00000556498 EME1Q96AY2 570 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 CCDC127Q96BQ5 260 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 PPM1MQ96MI6 270 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 BBS4Q96RK4 519 aa6.48□□□□□ -1.37
TDP1-215ENST00000556498 MED15Q96RN5 788 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms