RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 CMTM8Q8IZV2 173 aa16.11■□□□□ 0.17
ACTN1-217ENST00000556203 NUP93Q8N1F7 819 aa16.11■□□□□ 0.17
ACTN1-217ENST00000556203 ZMIZ2Q8NF64 920 aa16.11■□□□□ 0.17
ACTN1-217ENST00000556203 FLCNQ8NFG4 579 aa16.11■□□□□ 0.17
ACTN1-217ENST00000556203 LMO3Q8TAP4 145 aa16.11■□□□□ 0.17
ACTN1-217ENST00000556203 CYFIP2Q96F07 1278 aa16.11■□□□□ 0.17
ACTN1-217ENST00000556203 TMEM176AQ96HP8 235 aa16.11■□□□□ 0.17
ACTN1-217ENST00000556203 HEXIM2Q96MH2 286 aaKnown RBP16.11■□□□□ 0.17
ACTN1-217ENST00000556203 SMOQ99835 787 aa16.11■□□□□ 0.17
ACTN1-217ENST00000556203 TTLL2Q9BWV7 592 aa16.11■□□□□ 0.17
ACTN1-217ENST00000556203 THAP9Q9H5L6 903 aa16.11■□□□□ 0.17
ACTN1-217ENST00000556203 FAM124BQ9H5Z6 455 aaPredicted RBP16.11■□□□□ 0.17
ACTN1-217ENST00000556203 TRPC7Q9HCX4 862 aa16.11■□□□□ 0.17
ACTN1-217ENST00000556203 ARHGEF3Q9NR81 526 aa16.11■□□□□ 0.17
ACTN1-217ENST00000556203 SOBPA7XYQ1 873 aa16.1■□□□□ 0.17
ACTN1-217ENST00000556203 GDI1P31150 447 aa16.1■□□□□ 0.17
ACTN1-217ENST00000556203 SLC5A3P53794 718 aa16.1■□□□□ 0.17
ACTN1-217ENST00000556203 RAD23BP54727 409 aa16.1■□□□□ 0.17
ACTN1-217ENST00000556203 MAP3K7CLP57077 242 aa16.1■□□□□ 0.17
ACTN1-217ENST00000556203 YWHAEP62258 255 aaKnown RBP16.1■□□□□ 0.17
ACTN1-217ENST00000556203 TAF10Q12962 218 aa16.1■□□□□ 0.17
ACTN1-217ENST00000556203 CT47A1Q5JQC4 288 aaPredicted RBP16.1■□□□□ 0.17
ACTN1-217ENST00000556203 CCDC183Q5T5S1 534 aa16.1■□□□□ 0.17
ACTN1-217ENST00000556203 IER5LQ5T953 404 aa16.1■□□□□ 0.17
ACTN1-217ENST00000556203 MFSD6LQ8IWD5 586 aa16.1■□□□□ 0.17
ACTN1-217ENST00000556203 YAF2Q8IY57 180 aa16.1■□□□□ 0.17
ACTN1-217ENST00000556203 PPM1KQ8N3J5 372 aa16.1■□□□□ 0.17
ACTN1-217ENST00000556203 SLC4A11Q8NBS3 891 aa16.1■□□□□ 0.17
ACTN1-217ENST00000556203 EHBP1Q8NDI1 1231 aa16.1■□□□□ 0.17
ACTN1-217ENST00000556203 LRRC3BQ96PB8 259 aa16.1■□□□□ 0.17
ACTN1-217ENST00000556203 INTS2Q9H0H0 1204 aaKnown RBP16.1■□□□□ 0.17
ACTN1-217ENST00000556203 BRD9Q9H8M2 597 aa16.1■□□□□ 0.17
ACTN1-217ENST00000556203 CSNK1G1Q9HCP0 422 aa16.1■□□□□ 0.17
ACTN1-217ENST00000556203 OBP2AQ9NY56 170 aa16.1■□□□□ 0.17
ACTN1-217ENST00000556203 TRPM5Q9NZQ8 1165 aa16.1■□□□□ 0.17
ACTN1-217ENST00000556203 TRAV19A0A0A6YYK7 116 aa16.09■□□□□ 0.17
ACTN1-217ENST00000556203 C2orf78A6NCI8 922 aa16.09■□□□□ 0.17
ACTN1-217ENST00000556203 ZNF840PA6NDX5 716 aa16.09■□□□□ 0.17
ACTN1-217ENST00000556203 TNFRSF10BO14763 440 aa16.09■□□□□ 0.17
ACTN1-217ENST00000556203 ZNF263O14978 683 aa16.09■□□□□ 0.17
ACTN1-217ENST00000556203 RTN3O95197 1032 aaPredicted RBP16.09■□□□□ 0.17
ACTN1-217ENST00000556203 NPR3P17342 541 aa16.09■□□□□ 0.17
ACTN1-217ENST00000556203 RFX1P22670 979 aa16.09■□□□□ 0.17
ACTN1-217ENST00000556203 YWHAQP27348 245 aa16.09■□□□□ 0.17
ACTN1-217ENST00000556203 MTIF2P46199 727 aaKnown RBP16.09■□□□□ 0.17
ACTN1-217ENST00000556203 VCPP55072 806 aaKnown RBP16.09■□□□□ 0.17
ACTN1-217ENST00000556203 SLC44A4Q53GD3 710 aa16.09■□□□□ 0.17
ACTN1-217ENST00000556203 PPP1R26Q5T8A7 1209 aaPredicted RBP16.09■□□□□ 0.17
ACTN1-217ENST00000556203 CWF19L1Q69YN2 538 aaKnown RBP16.09■□□□□ 0.17
ACTN1-217ENST00000556203 SASS6Q6UVJ0 657 aa16.09■□□□□ 0.17
ACTN1-217ENST00000556203 FAM114A1Q8IWE2 563 aa16.09■□□□□ 0.17
ACTN1-217ENST00000556203 CELF5Q8N6W0 485 aaKnown RBP16.09■□□□□ 0.17
ACTN1-217ENST00000556203 UBR7Q8N806 425 aa16.09■□□□□ 0.17
ACTN1-217ENST00000556203 SCAMP5Q8TAC9 235 aa16.09■□□□□ 0.17
ACTN1-217ENST00000556203 KAT5Q92993 513 aa16.09■□□□□ 0.17
ACTN1-217ENST00000556203 USP13Q92995 863 aaPredicted RBP16.09■□□□□ 0.17
ACTN1-217ENST00000556203 SLITRK1Q96PX8 696 aa16.09■□□□□ 0.17
ACTN1-217ENST00000556203 RAPGEFL1Q9UHV5 662 aa16.09■□□□□ 0.17
ACTN1-217ENST00000556203 HCN4Q9Y3Q4 1203 aa16.09■□□□□ 0.17
ACTN1-217ENST00000556203 STK25O00506 426 aa16.08■□□□□ 0.16
ACTN1-217ENST00000556203 ABL1P00519 1130 aa16.08■□□□□ 0.16
ACTN1-217ENST00000556203 PPP3CCP48454 512 aa16.08■□□□□ 0.16
ACTN1-217ENST00000556203 FCHO2Q0JRZ9 810 aa16.08■□□□□ 0.16
ACTN1-217ENST00000556203 MLF2Q15773 248 aaPredicted RBP16.08■□□□□ 0.16
ACTN1-217ENST00000556203 HSP90AA4PQ58FG1 418 aa16.08■□□□□ 0.16
ACTN1-217ENST00000556203 ASTLQ6HA08 431 aaPredicted RBP16.08■□□□□ 0.16
ACTN1-217ENST00000556203 CLEC20AQ6ZU45 233 aa16.08■□□□□ 0.16
ACTN1-217ENST00000556203 RRAGAQ7L523 313 aa16.08■□□□□ 0.16
ACTN1-217ENST00000556203 ARHGEF19Q8IW93 802 aa16.08■□□□□ 0.16
ACTN1-217ENST00000556203 ARL14EPQ8N8R7 260 aaPredicted RBP16.08■□□□□ 0.16
ACTN1-217ENST00000556203 BPIFB1Q8TDL5 484 aa16.08■□□□□ 0.16
ACTN1-217ENST00000556203 DNASE1L2Q92874 299 aa16.08■□□□□ 0.16
ACTN1-217ENST00000556203 IRF7Q92985 503 aa16.08■□□□□ 0.16
ACTN1-217ENST00000556203 FBXO32Q969P5 355 aa16.08■□□□□ 0.16
ACTN1-217ENST00000556203 JAKMIP2Q96AA8 810 aa16.08■□□□□ 0.16
ACTN1-217ENST00000556203 SLC22A12Q96S37 553 aa16.08■□□□□ 0.16
ACTN1-217ENST00000556203 CYP2S1Q96SQ9 504 aa16.08■□□□□ 0.16
ACTN1-217ENST00000556203 TBC1D17Q9HA65 648 aa16.08■□□□□ 0.16
ACTN1-217ENST00000556203 TDP1Q9NUW8 608 aa16.08■□□□□ 0.16
ACTN1-217ENST00000556203 GCNT4Q9P109 453 aa16.08■□□□□ 0.16
ACTN1-217ENST00000556203 CCL26Q9Y258 94 aa16.08■□□□□ 0.16
ACTN1-217ENST00000556203 CKMP06732 381 aa16.07■□□□□ 0.16
ACTN1-217ENST00000556203 HDCP19113 662 aa16.07■□□□□ 0.16
ACTN1-217ENST00000556203 AVPR2P30518 371 aa16.07■□□□□ 0.16
ACTN1-217ENST00000556203 MAN2A1Q16706 1144 aa16.07■□□□□ 0.16
ACTN1-217ENST00000556203 ARHGAP17Q68EM7 881 aa16.07■□□□□ 0.16
ACTN1-217ENST00000556203 TMEM270Q6UE05 265 aa16.07■□□□□ 0.16
ACTN1-217ENST00000556203 PDZD8Q8NEN9 1154 aa16.07■□□□□ 0.16
ACTN1-217ENST00000556203 ENOX1Q8TC92 643 aaKnown RBP16.07■□□□□ 0.16
ACTN1-217ENST00000556203 SHDQ96IW2 340 aa16.07■□□□□ 0.16
ACTN1-217ENST00000556203 ZFYVE19Q96K21 471 aa16.07■□□□□ 0.16
ACTN1-217ENST00000556203 CRACR2AQ9BSW2 395 aa16.07■□□□□ 0.16
ACTN1-217ENST00000556203 DUSP16Q9BY84 665 aa16.07■□□□□ 0.16
ACTN1-217ENST00000556203 KIF9Q9HAQ2 790 aa16.07■□□□□ 0.16
ACTN1-217ENST00000556203 HEBP1Q9NRV9 189 aa16.07■□□□□ 0.16
ACTN1-217ENST00000556203 ANO10Q9NW15 660 aa16.07■□□□□ 0.16
ACTN1-217ENST00000556203 COMMD8Q9NX08 183 aa16.07■□□□□ 0.16
ACTN1-217ENST00000556203 IL37Q9NZH6 218 aa16.07■□□□□ 0.16
ACTN1-217ENST00000556203 TMEM63CQ9P1W3 806 aa16.07■□□□□ 0.16
ACTN1-217ENST00000556203 NFE2L3Q9Y4A8 694 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms