RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 HS2ST1Q7LGA3 356 aa20.1■□□□□ 0.81
CDKN3-209ENST00000556102 CACNA2D4Q7Z3S7 1137 aa20.1■□□□□ 0.81
CDKN3-209ENST00000556102 XXYLT1Q8NBI6 393 aa20.1■□□□□ 0.81
CDKN3-209ENST00000556102 SCFD1Q8WVM8 642 aa20.1■□□□□ 0.81
CDKN3-209ENST00000556102 PCED1BQ96HM7 432 aa20.1■□□□□ 0.81
CDKN3-209ENST00000556102 LOXL4Q96JB6 756 aa20.1■□□□□ 0.81
CDKN3-209ENST00000556102 MRPL45Q9BRJ2 306 aaKnown RBP20.1■□□□□ 0.81
CDKN3-209ENST00000556102 EHD2Q9NZN4 543 aa20.1■□□□□ 0.81
CDKN3-209ENST00000556102 TRPM5Q9NZQ8 1165 aa20.1■□□□□ 0.81
CDKN3-209ENST00000556102 CLIC2O15247 247 aa20.09■□□□□ 0.81
CDKN3-209ENST00000556102 AKAP3O75969 853 aa20.09■□□□□ 0.81
CDKN3-209ENST00000556102 CST3P01034 146 aaPredicted RBP20.09■□□□□ 0.81
CDKN3-209ENST00000556102 FAM163BP0C2L3 166 aa20.09■□□□□ 0.81
CDKN3-209ENST00000556102 GNL1P36915 607 aaPredicted RBP20.09■□□□□ 0.81
CDKN3-209ENST00000556102 USP46P62068 366 aa20.09■□□□□ 0.81
CDKN3-209ENST00000556102 NR1H3Q13133 447 aa20.09■□□□□ 0.81
CDKN3-209ENST00000556102 MDH1BQ5I0G3 518 aa20.09■□□□□ 0.81
CDKN3-209ENST00000556102 NELFCDQ8IXH7 590 aa20.09■□□□□ 0.81
CDKN3-209ENST00000556102 TTLL2Q9BWV7 592 aa20.09■□□□□ 0.81
CDKN3-209ENST00000556102 SNX25Q9H3E2 840 aa20.09■□□□□ 0.81
CDKN3-209ENST00000556102 NME7Q9Y5B8 376 aa20.09■□□□□ 0.81
CDKN3-209ENST00000556102 POLR2DO15514 142 aaKnown RBP20.08■□□□□ 0.81
CDKN3-209ENST00000556102 CCDC192P0DO97 292 aa20.08■□□□□ 0.81
CDKN3-209ENST00000556102 TNNC1P63316 161 aa20.08■□□□□ 0.81
CDKN3-209ENST00000556102 KBTBD6Q86V97 674 aa20.08■□□□□ 0.81
CDKN3-209ENST00000556102 OR6B3Q8NGW1 331 aa20.08■□□□□ 0.81
CDKN3-209ENST00000556102 RPLP0P6Q8NHW5 317 aa20.08■□□□□ 0.81
CDKN3-209ENST00000556102 EZH1Q92800 747 aaPredicted RBP20.08■□□□□ 0.81
CDKN3-209ENST00000556102 ACDQ96AP0 544 aa20.08■□□□□ 0.81
CDKN3-209ENST00000556102 CCDC127Q96BQ5 260 aa20.08■□□□□ 0.81
CDKN3-209ENST00000556102 C8orf48Q96LL4 319 aa20.08■□□□□ 0.81
CDKN3-209ENST00000556102 HHIPQ96QV1 700 aa20.08■□□□□ 0.81
CDKN3-209ENST00000556102 CGNQ9P2M7 1197 aaKnown RBP20.08■□□□□ 0.81
CDKN3-209ENST00000556102 CNOT1A5YKK6 2376 aaKnown RBP20.07■□□□□ 0.8
CDKN3-209ENST00000556102 F8VP50 259 aa20.07■□□□□ 0.8
CDKN3-209ENST00000556102 AXIN1O15169 862 aa20.07■□□□□ 0.8
CDKN3-209ENST00000556102 GDF9O60383 454 aa20.07■□□□□ 0.8
CDKN3-209ENST00000556102 EPN2O95208 641 aa20.07■□□□□ 0.8
CDKN3-209ENST00000556102 NFATC1O95644 943 aa20.07■□□□□ 0.8
CDKN3-209ENST00000556102 STAU1O95793 577 aaKnown RBP20.07■□□□□ 0.8
CDKN3-209ENST00000556102 RAP1GAPP47736 663 aa20.07■□□□□ 0.8
CDKN3-209ENST00000556102 PPP3CCP48454 512 aa20.07■□□□□ 0.8
CDKN3-209ENST00000556102 NOP14P78316 857 aaKnown RBP20.07■□□□□ 0.8
CDKN3-209ENST00000556102 BMT2Q1RMZ1 405 aa20.07■□□□□ 0.8
CDKN3-209ENST00000556102 WDR72Q3MJ13 1102 aa20.07■□□□□ 0.8
CDKN3-209ENST00000556102 FOXD4L5Q5VV16 416 aaPredicted RBP20.07■□□□□ 0.8
CDKN3-209ENST00000556102 SYT13Q7L8C5 426 aa20.07■□□□□ 0.8
CDKN3-209ENST00000556102 C12orf56Q8IXR9 622 aa20.07■□□□□ 0.8
CDKN3-209ENST00000556102 FOXD4L4Q8WXT5 416 aaPredicted RBP20.07■□□□□ 0.8
CDKN3-209ENST00000556102 BLZF1Q9H2G9 400 aa20.07■□□□□ 0.8
CDKN3-209ENST00000556102 ARRDC1-AS1Q9H2J1 176 aa20.07■□□□□ 0.8
CDKN3-209ENST00000556102 LINC00597Q9H2U6 94 aa20.07■□□□□ 0.8
CDKN3-209ENST00000556102 POLR3BQ9NW08 1133 aaPredicted RBP20.07■□□□□ 0.8
CDKN3-209ENST00000556102 ZNF840PA6NDX5 716 aa20.06■□□□□ 0.8
CDKN3-209ENST00000556102 LEFTY2O00292 366 aa20.06■□□□□ 0.8
CDKN3-209ENST00000556102 PDIA4P13667 645 aaKnown RBP20.06■□□□□ 0.8
CDKN3-209ENST00000556102 PTPN1P18031 435 aaKnown RBP20.06■□□□□ 0.8
CDKN3-209ENST00000556102 CASP1P29466 404 aa20.06■□□□□ 0.8
CDKN3-209ENST00000556102 SLC7A9P82251 487 aa20.06■□□□□ 0.8
CDKN3-209ENST00000556102 ZXDBP98169 803 aa20.06■□□□□ 0.8
CDKN3-209ENST00000556102 TRPC3Q13507 836 aa20.06■□□□□ 0.8
CDKN3-209ENST00000556102 KIAA1958Q8N8K9 716 aa20.06■□□□□ 0.8
CDKN3-209ENST00000556102 CCDC26Q8TAB7 109 aa20.06■□□□□ 0.8
CDKN3-209ENST00000556102 ZNF516Q92618 1163 aa20.06■□□□□ 0.8
CDKN3-209ENST00000556102 SNX21Q969T3 373 aa20.06■□□□□ 0.8
CDKN3-209ENST00000556102 ELOVL4Q9GZR5 314 aa20.06■□□□□ 0.8
CDKN3-209ENST00000556102 GZF1Q9H116 711 aaPredicted RBP20.06■□□□□ 0.8
CDKN3-209ENST00000556102 FAM13BQ9NYF5 915 aa20.06■□□□□ 0.8
CDKN3-209ENST00000556102 PVALEFA0A1B0GWK0 134 aa20.05■□□□□ 0.8
CDKN3-209ENST00000556102 ZNF806P0C7X5 589 aa20.05■□□□□ 0.8
CDKN3-209ENST00000556102 ATICP31939 592 aa20.05■□□□□ 0.8
CDKN3-209ENST00000556102 PSMD2Q13200 908 aa20.05■□□□□ 0.8
CDKN3-209ENST00000556102 DMC1Q14565 340 aa20.05■□□□□ 0.8
CDKN3-209ENST00000556102 AASDHQ4L235 1098 aaPredicted RBP20.05■□□□□ 0.8
CDKN3-209ENST00000556102 SYAP1Q96A49 352 aaPredicted RBP20.05■□□□□ 0.8
CDKN3-209ENST00000556102 ZC3H10Q96K80 434 aaKnown RBP20.05■□□□□ 0.8
CDKN3-209ENST00000556102 XYLT2Q9H1B5 865 aa20.05■□□□□ 0.8
CDKN3-209ENST00000556102 DPEP3Q9H4B8 488 aa20.05■□□□□ 0.8
CDKN3-209ENST00000556102 SLC39A2Q9NP94 309 aa20.05■□□□□ 0.8
CDKN3-209ENST00000556102 PCDHGA5Q9Y5G8 931 aa20.05■□□□□ 0.8
CDKN3-209ENST00000556102 ACACBO00763 2458 aa20.05■□□□□ 0.8
CDKN3-209ENST00000556102 A8MXQ7 604 aa20.04■□□□□ 0.8
CDKN3-209ENST00000556102 APBB3O95704 486 aa20.04■□□□□ 0.8
CDKN3-209ENST00000556102 OLFM2O95897 454 aa20.04■□□□□ 0.8
CDKN3-209ENST00000556102 ADRB1P08588 477 aa20.04■□□□□ 0.8
CDKN3-209ENST00000556102 ZSCAN22P10073 491 aaPredicted RBP20.04■□□□□ 0.8
CDKN3-209ENST00000556102 ME1P48163 572 aa20.04■□□□□ 0.8
CDKN3-209ENST00000556102 LIMK1P53667 647 aa20.04■□□□□ 0.8
CDKN3-209ENST00000556102 CACNA2D1P54289 1103 aa20.04■□□□□ 0.8
CDKN3-209ENST00000556102 MYL6P60660 151 aa20.04■□□□□ 0.8
CDKN3-209ENST00000556102 TAF10Q12962 218 aa20.04■□□□□ 0.8
CDKN3-209ENST00000556102 CUL4BQ13620 913 aa20.04■□□□□ 0.8
CDKN3-209ENST00000556102 SF3A2Q15428 464 aaKnown RBP20.04■□□□□ 0.8
CDKN3-209ENST00000556102 KNOP1Q1ED39 458 aaKnown RBP20.04■□□□□ 0.8
CDKN3-209ENST00000556102 FOXD4L6Q3SYB3 417 aaPredicted RBP20.04■□□□□ 0.8
CDKN3-209ENST00000556102 PPM1JQ5JR12 505 aa20.04■□□□□ 0.8
CDKN3-209ENST00000556102 TDRD10Q5VZ19 366 aaKnown RBP20.04■□□□□ 0.8
CDKN3-209ENST00000556102 RESP18Q5W5W9 173 aa20.04■□□□□ 0.8
CDKN3-209ENST00000556102 FOXD4L3Q6VB84 417 aaPredicted RBP20.04■□□□□ 0.8
CDKN3-209ENST00000556102 C12orf50Q8NA57 414 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms