RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 INTUQ9ULD6 942 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 COQ4Q9Y3A0 265 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 MRFAP1Q9Y605 127 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 AKAP13Q12802 2813 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 ATP8B3O60423 1300 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 A0A087X0T9 212 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.28□□□□□ -1.24
SLIRP-204ENST00000555890 CAPN8A6NHC0 703 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 BTNL10A8MVZ5 291 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 EFCAB8A8MWE9 144 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 INO80B-WBP1J3KQ70 363 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 FOXN3O00409 490 aaPredicted RBP7.28□□□□□ -1.24
SLIRP-204ENST00000555890 ACKR2O00590 384 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 OGTO15294 1046 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 TLR3O15455 904 aaKnown RBP7.28□□□□□ -1.24
SLIRP-204ENST00000555890 PI15O43692 258 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 ZEB2O60315 1214 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 B4GALT4O60513 344 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 EFCAB14O75071 495 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 WISP1O95388 367 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 C22orf31O95567 290 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 H2AFZP0C0S5 128 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 C6orf222P0C671 652 aaPredicted RBP7.28□□□□□ -1.24
SLIRP-204ENST00000555890 FAM228BP0C875 321 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 HOXD8P13378 290 aaPredicted RBP7.28□□□□□ -1.24
SLIRP-204ENST00000555890 USP8P40818 1118 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 ACOT2P49753 483 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 PTENP60484 403 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 CDC42EP1Q00587 391 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 BEX3Q00994 111 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 CKAP4Q07065 602 aaKnown RBP7.28□□□□□ -1.24
SLIRP-204ENST00000555890 PPFIA1Q13136 1202 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 DRP2Q13474 957 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 PRPF4BQ13523 1007 aaKnown RBP7.28□□□□□ -1.24
SLIRP-204ENST00000555890 GPNMBQ14956 572 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 CCDC6Q16204 474 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 KYAT1Q16773 422 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 WHAMMP3Q1A5X7 153 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 KIAA0753Q2KHM9 967 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 ALKBH5Q6P6C2 394 aaKnown RBP7.28□□□□□ -1.24
SLIRP-204ENST00000555890 MTHFD1LQ6UB35 978 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 TSHZ1Q6ZSZ6 1077 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 H2AFVQ71UI9 128 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 SV2AQ7L0J3 742 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 APBB1IPQ7Z5R6 666 aaPredicted RBP7.28□□□□□ -1.24
SLIRP-204ENST00000555890 MTERF4Q7Z6M4 381 aaKnown RBP7.28□□□□□ -1.24
SLIRP-204ENST00000555890 TMCO2Q7Z6W1 182 aaPredicted RBP7.28□□□□□ -1.24
SLIRP-204ENST00000555890 GALNT12Q8IXK2 581 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 PPM1KQ8N3J5 372 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 PCSK9Q8NBP7 692 aaKnown RBP7.28□□□□□ -1.24
SLIRP-204ENST00000555890 ZSWIM2Q8NEG5 633 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 LMBR1Q8WVP7 490 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 TRAPPC12Q8WVT3 735 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 RIN2Q8WYP3 895 aaPredicted RBP7.28□□□□□ -1.24
SLIRP-204ENST00000555890 LRIG1Q96JA1 1093 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 RPGRIP1Q96KN7 1286 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 NLRP4Q96MN2 994 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 MAP7D2Q96T17 732 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 CGRRF1Q99675 332 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 ACO2Q99798 780 aaKnown RBP7.28□□□□□ -1.24
SLIRP-204ENST00000555890 C16orf70Q9BSU1 422 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 CARD6Q9BX69 1037 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 NFKBIZQ9BYH8 718 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 INO80BQ9C086 356 aaPredicted RBP7.28□□□□□ -1.24
SLIRP-204ENST00000555890 FZD8Q9H461 694 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 NPHS2Q9NP85 383 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 PARD6AQ9NPB6 346 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 C1orf112Q9NSG2 853 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 PRMT7Q9NVM4 692 aaPredicted RBP7.28□□□□□ -1.24
SLIRP-204ENST00000555890 TRIM10Q9UDY6 481 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 NAGPAQ9UK23 515 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 MTUS1Q9ULD2 1270 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 Q9Y3F1 56 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 JRKLQ9Y4A0 524 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 SAR1BQ9Y6B6 198 aa7.28□□□□□ -1.24
SLIRP-204ENST00000555890 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.28□□□□□ -1.24
SLIRP-204ENST00000555890 PCNX1Q96RV3 2341 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 CELSR3Q9NYQ7 3312 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 FANCGO15287 622 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 DYNC1LI2O43237 492 aaPredicted RBP7.27□□□□□ -1.25
SLIRP-204ENST00000555890 MOCS3O95396 460 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 C4BPAP04003 597 aaKnown RBP7.27□□□□□ -1.25
SLIRP-204ENST00000555890 ZNF286BP0CG31 522 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 SP9P0CG40 484 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 HARSP12081 509 aaKnown RBP7.27□□□□□ -1.25
SLIRP-204ENST00000555890 PRLRP16471 622 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 SPINK2P20155 84 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 GSTT1P30711 240 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 PIK3CAP42336 1068 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 CPT1AP50416 773 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 RNF144AP50876 292 aaPredicted RBP7.27□□□□□ -1.25
SLIRP-204ENST00000555890 CLCN3P51790 818 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 NLRP11P59045 1033 aaKnown RBP7.27□□□□□ -1.25
SLIRP-204ENST00000555890 BPIFB4P59827 614 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 ERVK-21P61565 698 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 MCL1Q07820 350 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 BIRC3Q13489 604 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 PWP1Q13610 501 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 ITGA7Q13683 1181 aa7.27□□□□□ -1.25
SLIRP-204ENST00000555890 TRIP4Q15650 581 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms