RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 CD58P19256 250 aa21.79■■□□□ 1.08
VTI1B-205ENST00000555543 AVPR1AP37288 418 aa21.79■■□□□ 1.08
VTI1B-205ENST00000555543 NUBP1P53384 320 aa21.79■■□□□ 1.08
VTI1B-205ENST00000555543 CLEC17AQ6ZS10 378 aa21.79■■□□□ 1.08
VTI1B-205ENST00000555543 YAF2Q8IY57 180 aa21.79■■□□□ 1.08
VTI1B-205ENST00000555543 CCDC105Q8IYK2 499 aa21.79■■□□□ 1.08
VTI1B-205ENST00000555543 C12orf29Q8N999 325 aa21.79■■□□□ 1.08
VTI1B-205ENST00000555543 KCNK16Q96T55 309 aa21.79■■□□□ 1.08
VTI1B-205ENST00000555543 ARID3AQ99856 593 aa21.79■■□□□ 1.08
VTI1B-205ENST00000555543 CYP3A43Q9HB55 503 aa21.79■■□□□ 1.08
VTI1B-205ENST00000555543 TRPC7Q9HCX4 862 aa21.79■■□□□ 1.08
VTI1B-205ENST00000555543 TRPV5Q9NQA5 729 aa21.79■■□□□ 1.08
VTI1B-205ENST00000555543 KRT82Q9NSB4 513 aa21.79■■□□□ 1.08
VTI1B-205ENST00000555543 FAM49BQ9NUQ9 324 aa21.79■■□□□ 1.08
VTI1B-205ENST00000555543 DLGAP2Q9P1A6 1054 aa21.79■■□□□ 1.08
VTI1B-205ENST00000555543 ZMYM5Q9UJ78 669 aa21.79■■□□□ 1.08
VTI1B-205ENST00000555543 SIT1Q9Y3P8 196 aa21.79■■□□□ 1.08
VTI1B-205ENST00000555543 ATP8B3O60423 1300 aa21.79■■□□□ 1.08
VTI1B-205ENST00000555543 C2orf78A6NCI8 922 aa21.78■■□□□ 1.08
VTI1B-205ENST00000555543 CHADO15335 359 aa21.78■■□□□ 1.08
VTI1B-205ENST00000555543 CILPO75339 1184 aa21.78■■□□□ 1.08
VTI1B-205ENST00000555543 PTPN5P54829 565 aa21.78■■□□□ 1.08
VTI1B-205ENST00000555543 PAK1Q13153 545 aa21.78■■□□□ 1.08
VTI1B-205ENST00000555543 FOXR2Q6PJQ5 311 aa21.78■■□□□ 1.08
VTI1B-205ENST00000555543 FILIP1Q7Z7B0 1213 aa21.78■■□□□ 1.08
VTI1B-205ENST00000555543 TRIML1Q8N9V2 468 aa21.78■■□□□ 1.08
VTI1B-205ENST00000555543 CCDC150Q8NCX0 1101 aa21.78■■□□□ 1.08
VTI1B-205ENST00000555543 SLC2A14Q8TDB8 520 aa21.78■■□□□ 1.08
VTI1B-205ENST00000555543 BPIFB1Q8TDL5 484 aa21.78■■□□□ 1.08
VTI1B-205ENST00000555543 SMARCD1Q96GM5 515 aa21.78■■□□□ 1.08
VTI1B-205ENST00000555543 CYP2S1Q96SQ9 504 aa21.78■■□□□ 1.08
VTI1B-205ENST00000555543 COQ4Q9Y3A0 265 aa21.78■■□□□ 1.08
VTI1B-205ENST00000555543 ZNF638Q14966 1978 aaKnown RBP21.78■■□□□ 1.08
VTI1B-205ENST00000555543 BICDL2A1A5D9 508 aa21.77■■□□□ 1.08
VTI1B-205ENST00000555543 AP1G2O75843 785 aa21.77■■□□□ 1.08
VTI1B-205ENST00000555543 UBXN2BQ14CS0 331 aa21.77■■□□□ 1.08
VTI1B-205ENST00000555543 CCDC40Q4G0X9 1142 aa21.77■■□□□ 1.08
VTI1B-205ENST00000555543 FRMD5Q7Z6J6 570 aa21.77■■□□□ 1.08
VTI1B-205ENST00000555543 CELF5Q8N6W0 485 aaKnown RBP21.77■■□□□ 1.08
VTI1B-205ENST00000555543 DTWD2Q8NBA8 298 aa21.77■■□□□ 1.08
VTI1B-205ENST00000555543 ZMIZ2Q8NF64 920 aa21.77■■□□□ 1.08
VTI1B-205ENST00000555543 TATDN2Q93075 761 aa21.77■■□□□ 1.08
VTI1B-205ENST00000555543 SMOQ99835 787 aa21.77■■□□□ 1.08
VTI1B-205ENST00000555543 CLSTN2Q9H4D0 955 aa21.77■■□□□ 1.08
VTI1B-205ENST00000555543 METTL14Q9HCE5 456 aaKnown RBP21.77■■□□□ 1.08
VTI1B-205ENST00000555543 LTB4R2Q9NPC1 389 aa21.77■■□□□ 1.08
VTI1B-205ENST00000555543 DMAP1Q9NPF5 467 aaPredicted RBP21.77■■□□□ 1.08
VTI1B-205ENST00000555543 TDP1Q9NUW8 608 aa21.77■■□□□ 1.08
VTI1B-205ENST00000555543 GCNT4Q9P109 453 aa21.77■■□□□ 1.08
VTI1B-205ENST00000555543 PIAS3Q9Y6X2 628 aa21.77■■□□□ 1.08
VTI1B-205ENST00000555543 F5P12259 2224 aa21.76■■□□□ 1.07
VTI1B-205ENST00000555543 SOBPA7XYQ1 873 aa21.76■■□□□ 1.07
VTI1B-205ENST00000555543 BEST1O76090 585 aa21.76■■□□□ 1.07
VTI1B-205ENST00000555543 TARSP26639 723 aaKnown RBP21.76■■□□□ 1.07
VTI1B-205ENST00000555543 IFRD2Q12894 506 aaPredicted RBP21.76■■□□□ 1.07
VTI1B-205ENST00000555543 NT5C1AQ9BXI3 368 aa21.76■■□□□ 1.07
VTI1B-205ENST00000555543 MIA3Q5JRA6 1907 aa21.76■■□□□ 1.07
VTI1B-205ENST00000555543 FAM170BA6NMN3 283 aa21.75■■□□□ 1.07
VTI1B-205ENST00000555543 H0Y858 1186 aa21.75■■□□□ 1.07
VTI1B-205ENST00000555543 TNFRSF10BO14763 440 aa21.75■■□□□ 1.07
VTI1B-205ENST00000555543 ADORA2BP29275 332 aa21.75■■□□□ 1.07
VTI1B-205ENST00000555543 SOX9P48436 509 aa21.75■■□□□ 1.07
VTI1B-205ENST00000555543 FMO5P49326 533 aa21.75■■□□□ 1.07
VTI1B-205ENST00000555543 TNK2Q07912 1038 aa21.75■■□□□ 1.07
VTI1B-205ENST00000555543 TAF10Q12962 218 aa21.75■■□□□ 1.07
VTI1B-205ENST00000555543 ARHGAP29Q52LW3 1261 aa21.75■■□□□ 1.07
VTI1B-205ENST00000555543 ZNF852Q6ZMS4 543 aa21.75■■□□□ 1.07
VTI1B-205ENST00000555543 NUP93Q8N1F7 819 aa21.75■■□□□ 1.07
VTI1B-205ENST00000555543 ARL14EPQ8N8R7 260 aaPredicted RBP21.75■■□□□ 1.07
VTI1B-205ENST00000555543 SCAMP5Q8TAC9 235 aa21.75■■□□□ 1.07
VTI1B-205ENST00000555543 TTC8Q8TAM2 541 aa21.75■■□□□ 1.07
VTI1B-205ENST00000555543 MED15Q96RN5 788 aa21.75■■□□□ 1.07
VTI1B-205ENST00000555543 PHOX2BQ99453 314 aa21.75■■□□□ 1.07
VTI1B-205ENST00000555543 KIF9Q9HAQ2 790 aa21.75■■□□□ 1.07
VTI1B-205ENST00000555543 CISHQ9NSE2 258 aa21.75■■□□□ 1.07
VTI1B-205ENST00000555543 LMBRD1Q9NUN5 540 aa21.75■■□□□ 1.07
VTI1B-205ENST00000555543 FAM86C1Q9NVL1 165 aa21.75■■□□□ 1.07
VTI1B-205ENST00000555543 GTSE1Q9NYZ3 720 aa21.75■■□□□ 1.07
VTI1B-205ENST00000555543 TRPM5Q9NZQ8 1165 aa21.75■■□□□ 1.07
VTI1B-205ENST00000555543 PATJQ8NI35 1801 aa21.74■■□□□ 1.07
VTI1B-205ENST00000555543 TRAV19A0A0A6YYK7 116 aa21.74■■□□□ 1.07
VTI1B-205ENST00000555543 ZNF840PA6NDX5 716 aa21.74■■□□□ 1.07
VTI1B-205ENST00000555543 CKMP06732 381 aa21.74■■□□□ 1.07
VTI1B-205ENST00000555543 SLC5A3P53794 718 aa21.74■■□□□ 1.07
VTI1B-205ENST00000555543 ZNF268Q14587 947 aaPredicted RBP21.74■■□□□ 1.07
VTI1B-205ENST00000555543 ZNF394Q53GI3 561 aa21.74■■□□□ 1.07
VTI1B-205ENST00000555543 WDR44Q5JSH3 913 aa21.74■■□□□ 1.07
VTI1B-205ENST00000555543 ZNF687Q8N1G0 1237 aa21.74■■□□□ 1.07
VTI1B-205ENST00000555543 CSGALNACT1Q8TDX6 532 aa21.74■■□□□ 1.07
VTI1B-205ENST00000555543 FAXDC2Q96IV6 333 aa21.74■■□□□ 1.07
VTI1B-205ENST00000555543 HNRNPABQ99729 332 aaKnown RBP21.74■■□□□ 1.07
VTI1B-205ENST00000555543 CSNK1G1Q9HCP0 422 aa21.74■■□□□ 1.07
VTI1B-205ENST00000555543 EHD2Q9NZN4 543 aa21.74■■□□□ 1.07
VTI1B-205ENST00000555543 MYO15AQ9UKN7 3530 aa21.74■■□□□ 1.07
VTI1B-205ENST00000555543 DMDP11532 3685 aa21.74■■□□□ 1.07
VTI1B-205ENST00000555543 HELZP42694 1942 aaKnown RBP21.73■■□□□ 1.07
VTI1B-205ENST00000555543 USP17L7P0C7H9 530 aa21.73■■□□□ 1.07
VTI1B-205ENST00000555543 MAP3K7CLP57077 242 aa21.73■■□□□ 1.07
VTI1B-205ENST00000555543 USP4Q13107 963 aa21.73■■□□□ 1.07
VTI1B-205ENST00000555543 ZNF77Q15935 545 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms