RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 PFKMP08237 780 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 MMP8P22894 467 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 PSMA2P25787 234 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 CENPCQ03188 943 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 ADCY1Q08828 1119 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 RPS6KA1Q15418 735 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 CCDC181Q5TID7 509 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 FAM183BPQ6ZVS7 135 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 MYCBPAPQ8TBZ2 947 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 ULBP1Q9BZM6 244 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 CYP4F11Q9HBI6 524 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 ENTPD7Q9NQZ7 604 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 TMEM30AQ9NV96 361 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 AMFRQ9UKV5 643 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 GABRDO14764 452 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 FGF18O76093 207 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 LCA5LO95447 670 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 PDGFRAP16234 1089 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 NPR3P17342 541 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 COMTP21964 271 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 ELF1P32519 619 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 CCDC50Q8IVM0 306 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 DCP1BQ8IZD4 617 aaKnown RBP10.74□□□□□ -0.69
NEK9-205ENST00000555405 COLGALT1Q8NBJ5 622 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 MS4A14Q96JA4 679 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 ACBD6Q9BR61 282 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.74□□□□□ -0.69
NEK9-205ENST00000555405 PI4K2BG5E9Z4 385 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 FANCGO15287 622 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 CXCL14O95715 111 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 PBX2P40425 430 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 MAMLD1Q13495 774 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 SMC1AQ14683 1233 aaKnown RBP10.74□□□□□ -0.69
NEK9-205ENST00000555405 C15orf59Q2T9L4 293 aaPredicted RBP10.74□□□□□ -0.69
NEK9-205ENST00000555405 SMTNL2Q2TAL5 461 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 RNF19BQ6ZMZ0 732 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 CLEC20AQ6ZU45 233 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 PAQR9Q6ZVX9 377 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 MON1BQ7L1V2 547 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 RHOT2Q8IXI1 618 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 MNS1Q8NEH6 495 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 FBXO22Q8NEZ5 403 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 TSC1Q92574 1164 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 RAD9AQ99638 391 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 SMOQ99835 787 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 CARD6Q9BX69 1037 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 MRPL47Q9HD33 250 aaKnown RBP10.74□□□□□ -0.69
NEK9-205ENST00000555405 AAASQ9NRG9 546 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 PARVAQ9NVD7 372 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 CHD7Q9P2D1 2997 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 M0QZQ0 153 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 PRRG1O14668 218 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 NME3Q13232 169 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 MTMR3Q13615 1198 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 ATP13A4Q4VNC1 1196 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 DCAF6Q58WW2 860 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 KCNT1Q5JUK3 1230 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 SH3PXD2AQ5TCZ1 1133 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 GPRIN1Q7Z2K8 1008 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 FEZF2Q8TBJ5 459 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 ARNTL2Q8WYA1 636 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 DUSP16Q9BY84 665 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 TDRD15B5MCY1 1934 aaKnown RBP10.73□□□□□ -0.69
NEK9-205ENST00000555405 KIF2AO00139 706 aaPredicted RBP10.73□□□□□ -0.69
NEK9-205ENST00000555405 BAIAP3O94812 1187 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 LAG3P18627 525 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 ANXA13P27216 316 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 ELAVL2Q12926 359 aaKnown RBP10.73□□□□□ -0.69
NEK9-205ENST00000555405 STILQ15468 1287 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 KAZNQ674X7 775 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 AADACL2Q6P093 401 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 C4orf50Q6ZRC1 276 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 RXFP2Q8WXD0 754 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 RNF34Q969K3 372 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 CFAP57Q96MR6 1250 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 PCDHGC3Q9UN70 934 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 H0YGN5 161 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 PER2O15055 1255 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 PJA2O43164 708 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 PAPSS1O43252 624 aaPredicted RBP10.73□□□□□ -0.69
NEK9-205ENST00000555405 LSM8O95777 96 aaKnown RBP10.73□□□□□ -0.69
NEK9-205ENST00000555405 MARCKSL1P49006 195 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 NUMBP49757 651 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 RAB6CQ53S08 254 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 ZNF697Q5TEC3 545 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.73□□□□□ -0.69
NEK9-205ENST00000555405 RSRC2Q7L4I2 434 aaKnown RBP10.73□□□□□ -0.69
NEK9-205ENST00000555405 RNF25Q96BH1 459 aaPredicted RBP10.73□□□□□ -0.69
NEK9-205ENST00000555405 HNRNPABQ99729 332 aaKnown RBP10.73□□□□□ -0.69
NEK9-205ENST00000555405 RAB6CQ9H0N0 254 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 PCDHB5Q9Y5E4 795 aa10.73□□□□□ -0.69
NEK9-205ENST00000555405 RIOK3O14730 519 aaKnown RBP10.72□□□□□ -0.69
NEK9-205ENST00000555405 ARHGEF15O94989 841 aa10.72□□□□□ -0.69
NEK9-205ENST00000555405 FLT3P36888 993 aa10.72□□□□□ -0.69
NEK9-205ENST00000555405 GLUD2P49448 558 aa10.72□□□□□ -0.69
NEK9-205ENST00000555405 TERF1P54274 439 aa10.72□□□□□ -0.69
NEK9-205ENST00000555405 C1QBPQ07021 282 aaKnown RBP10.72□□□□□ -0.69
NEK9-205ENST00000555405 HFE2Q6ZVN8 426 aa10.72□□□□□ -0.69
NEK9-205ENST00000555405 ANKS3Q6ZW76 656 aa10.72□□□□□ -0.69
NEK9-205ENST00000555405 XYLT1Q86Y38 959 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms