RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 ACVR2BQ13705 512 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 MOGSQ13724 837 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 FAM102AQ5T9C2 384 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-211ENST00000553882 JADE1Q6IE81 842 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 PCGF5Q86SE9 256 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 GIMAP7Q8NHV1 300 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 PIWIL1Q96J94 861 aaKnown RBP15.26■□□□□ 0.03
ACTN1-211ENST00000553882 LRRC37BQ96QE4 947 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 LHX5Q9H2C1 402 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 GPRC5DQ9NZD1 345 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 USP18Q9UMW8 372 aa15.26■□□□□ 0.03
ACTN1-211ENST00000553882 MCM3APO60318 1980 aa15.25■□□□□ 0.03
ACTN1-211ENST00000553882 KAT6AQ92794 2004 aa15.25■□□□□ 0.03
ACTN1-211ENST00000553882 IGKV6-21A0A0C4DH24 114 aa15.25■□□□□ 0.03
ACTN1-211ENST00000553882 LACTBL1A8MY62 500 aa15.25■□□□□ 0.03
ACTN1-211ENST00000553882 IRF6O14896 467 aa15.25■□□□□ 0.03
ACTN1-211ENST00000553882 EDF1O60869 148 aaKnown RBP15.25■□□□□ 0.03
ACTN1-211ENST00000553882 RNF8O76064 485 aa15.25■□□□□ 0.03
ACTN1-211ENST00000553882 MAP3K6O95382 1288 aa15.25■□□□□ 0.03
ACTN1-211ENST00000553882 RIPK1Q13546 671 aa15.25■□□□□ 0.03
ACTN1-211ENST00000553882 SETDB1Q15047 1291 aa15.25■□□□□ 0.03
ACTN1-211ENST00000553882 CELF3Q5SZQ8 465 aaKnown RBP15.25■□□□□ 0.03
ACTN1-211ENST00000553882 ZNF449Q6P9G9 518 aa15.25■□□□□ 0.03
ACTN1-211ENST00000553882 OTUD5Q96G74 571 aa15.25■□□□□ 0.03
ACTN1-211ENST00000553882 PEBP4Q96S96 227 aa15.25■□□□□ 0.03
ACTN1-211ENST00000553882 FZD8Q9H461 694 aa15.25■□□□□ 0.03
ACTN1-211ENST00000553882 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.25■□□□□ 0.03
ACTN1-211ENST00000553882 HAO1Q9UJM8 370 aa15.25■□□□□ 0.03
ACTN1-211ENST00000553882 MAGEB2O15479 319 aa15.25■□□□□ 0.03
ACTN1-211ENST00000553882 PHBP35232 272 aa15.25■□□□□ 0.03
ACTN1-211ENST00000553882 MBTD1Q05BQ5 628 aa15.25■□□□□ 0.03
ACTN1-211ENST00000553882 SEPT7Q16181 437 aaKnown RBP15.25■□□□□ 0.03
ACTN1-211ENST00000553882 C15orf59Q2T9L4 293 aaPredicted RBP15.25■□□□□ 0.03
ACTN1-211ENST00000553882 IGDCC3Q8IVU1 814 aa15.25■□□□□ 0.03
ACTN1-211ENST00000553882 PDIK1LQ8N165 341 aa15.25■□□□□ 0.03
ACTN1-211ENST00000553882 TTC13Q8NBP0 860 aa15.25■□□□□ 0.03
ACTN1-211ENST00000553882 LRRN4Q8WUT4 740 aa15.25■□□□□ 0.03
ACTN1-211ENST00000553882 CPB2Q96IY4 423 aa15.25■□□□□ 0.03
ACTN1-211ENST00000553882 HEXIM2Q96MH2 286 aaKnown RBP15.25■□□□□ 0.03
ACTN1-211ENST00000553882 BCO2Q9BYV7 579 aa15.25■□□□□ 0.03
ACTN1-211ENST00000553882 NPHS2Q9NP85 383 aa15.25■□□□□ 0.03
ACTN1-211ENST00000553882 MCF2LO15068 1137 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 AVILO75366 819 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 CCNB1P14635 433 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 GBP2P32456 591 aaPredicted RBP15.24■□□□□ 0.03
ACTN1-211ENST00000553882 OVGP1Q12889 678 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 OTOAQ7RTW8 1153 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 TCP10LQ8TDR4 215 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 FNIP1Q8TF40 1166 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 ZNF75CPQ92670 426 aaPredicted RBP15.24■□□□□ 0.03
ACTN1-211ENST00000553882 N4BP2L2Q92802 583 aaPredicted RBP15.24■□□□□ 0.03
ACTN1-211ENST00000553882 ADPGKQ9BRR6 497 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 RNPEPQ9H4A4 650 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 YY1AP1Q9H869 796 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 TXNRD2Q9NNW7 524 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 SLC17A7Q9P2U7 560 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 USH1CQ9Y6N9 552 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 APOC4-APOC2K7ER74 178 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 SOCS7O14512 581 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 APOC2P02655 101 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 STAG3L1P0CL83 205 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 GCLCP48506 637 aaPredicted RBP15.24■□□□□ 0.03
ACTN1-211ENST00000553882 CDH6P55285 790 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 GJC2Q5T442 439 aaPredicted RBP15.24■□□□□ 0.03
ACTN1-211ENST00000553882 DARS2Q6PI48 645 aaKnown RBP15.24■□□□□ 0.03
ACTN1-211ENST00000553882 TMEM176AQ96HP8 235 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 FGD4Q96M96 766 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 MYCBPQ99417 103 aaPredicted RBP15.24■□□□□ 0.03
ACTN1-211ENST00000553882 ACSS3Q9H6R3 686 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 PDGFCQ9NRA1 345 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 DCTN4Q9UJW0 460 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 EFR3BQ9Y2G0 817 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 WDR90Q96KV7 1748 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 LOC285556D6RIA3 1793 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 ANK1P16157 1881 aa15.24■□□□□ 0.03
ACTN1-211ENST00000553882 GAS2O43903 313 aaKnown RBP15.23■□□□□ 0.03
ACTN1-211ENST00000553882 CBX6O95503 412 aa15.23■□□□□ 0.03
ACTN1-211ENST00000553882 ANP32DO95626 131 aa15.23■□□□□ 0.03
ACTN1-211ENST00000553882 TRUB2O95900 331 aaKnown RBP15.23■□□□□ 0.03
ACTN1-211ENST00000553882 YARSP54577 528 aaKnown RBP15.23■□□□□ 0.03
ACTN1-211ENST00000553882 C1orf228Q6PIY5 440 aa15.23■□□□□ 0.03
ACTN1-211ENST00000553882 UTP4Q969X6 686 aaKnown RBP15.23■□□□□ 0.03
ACTN1-211ENST00000553882 ELP3Q9H9T3 547 aa15.23■□□□□ 0.03
ACTN1-211ENST00000553882 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.23■□□□□ 0.03
ACTN1-211ENST00000553882 CSADQ9Y600 493 aa15.23■□□□□ 0.03
ACTN1-211ENST00000553882 CILPO75339 1184 aa15.23■□□□□ 0.03
ACTN1-211ENST00000553882 ELK3P41970 407 aa15.23■□□□□ 0.03
ACTN1-211ENST00000553882 SLC18A1P54219 525 aa15.23■□□□□ 0.03
ACTN1-211ENST00000553882 ATP11AP98196 1134 aa15.23■□□□□ 0.03
ACTN1-211ENST00000553882 DPYSL3Q14195 570 aa15.23■□□□□ 0.03
ACTN1-211ENST00000553882 MAP1SQ66K74 1059 aaPredicted RBP15.23■□□□□ 0.03
ACTN1-211ENST00000553882 TRNP1Q6NT89 227 aa15.23■□□□□ 0.03
ACTN1-211ENST00000553882 ADGRD1Q6QNK2 874 aa15.23■□□□□ 0.03
ACTN1-211ENST00000553882 C12orf29Q8N999 325 aa15.23■□□□□ 0.03
ACTN1-211ENST00000553882 CMASQ8NFW8 434 aaPredicted RBP15.23■□□□□ 0.03
ACTN1-211ENST00000553882 LGR5O75473 907 aa15.22■□□□□ 0.03
ACTN1-211ENST00000553882 TXNP10599 105 aaKnown RBP15.22■□□□□ 0.03
ACTN1-211ENST00000553882 GPD2P43304 727 aa15.22■□□□□ 0.03
ACTN1-211ENST00000553882 RNASELQ05823 741 aaKnown RBP15.22■□□□□ 0.03
ACTN1-211ENST00000553882 CCDC15Q0P6D6 951 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms