RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 C10orf76Q5T2E6 689 aa15.38■□□□□ 0.05
SHMT2-208ENST00000553868 TOGARAM2Q6ZUX3 1019 aa15.38■□□□□ 0.05
SHMT2-208ENST00000553868 CCAR2Q8N163 923 aaKnown RBP15.38■□□□□ 0.05
SHMT2-208ENST00000553868 NELL1Q92832 810 aa15.38■□□□□ 0.05
SHMT2-208ENST00000553868 DDX27Q96GQ7 796 aaKnown RBP15.38■□□□□ 0.05
SHMT2-208ENST00000553868 ZFP42Q96MM3 310 aa15.38■□□□□ 0.05
SHMT2-208ENST00000553868 UROC1Q96N76 676 aa15.38■□□□□ 0.05
SHMT2-208ENST00000553868 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.38■□□□□ 0.05
SHMT2-208ENST00000553868 KANSL3Q9P2N6 904 aa15.38■□□□□ 0.05
SHMT2-208ENST00000553868 CNTN6Q9UQ52 1028 aa15.38■□□□□ 0.05
SHMT2-208ENST00000553868 PPP2R2CQ9Y2T4 447 aa15.38■□□□□ 0.05
SHMT2-208ENST00000553868 IRAK3Q9Y616 596 aa15.38■□□□□ 0.05
SHMT2-208ENST00000553868 KANSL1LA0AUZ9 987 aa15.37■□□□□ 0.05
SHMT2-208ENST00000553868 PIRO00625 290 aa15.37■□□□□ 0.05
SHMT2-208ENST00000553868 CYP26A1O43174 497 aa15.37■□□□□ 0.05
SHMT2-208ENST00000553868 PLEKP08567 350 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-208ENST00000553868 PNMA6AP0CW24 399 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-208ENST00000553868 TNFAIP3P21580 790 aa15.37■□□□□ 0.05
SHMT2-208ENST00000553868 KLRC2P26717 231 aa15.37■□□□□ 0.05
SHMT2-208ENST00000553868 ASPAP45381 313 aa15.37■□□□□ 0.05
SHMT2-208ENST00000553868 ALDH7A1P49419 539 aaKnown RBP15.37■□□□□ 0.05
SHMT2-208ENST00000553868 TAF6P49848 677 aa15.37■□□□□ 0.05
SHMT2-208ENST00000553868 SCNN1GP51170 649 aa15.37■□□□□ 0.05
SHMT2-208ENST00000553868 GPC5P78333 572 aa15.37■□□□□ 0.05
SHMT2-208ENST00000553868 SLC18A3Q16572 532 aa15.37■□□□□ 0.05
SHMT2-208ENST00000553868 KIAA1328Q86T90 577 aa15.37■□□□□ 0.05
SHMT2-208ENST00000553868 ZNF677Q86XU0 584 aa15.37■□□□□ 0.05
SHMT2-208ENST00000553868 KLHL5Q96PQ7 755 aa15.37■□□□□ 0.05
SHMT2-208ENST00000553868 ARID3AQ99856 593 aa15.37■□□□□ 0.05
SHMT2-208ENST00000553868 VN1R3Q9BXE9 311 aa15.37■□□□□ 0.05
SHMT2-208ENST00000553868 WDR6Q9NNW5 1121 aaKnown RBP15.37■□□□□ 0.05
SHMT2-208ENST00000553868 SLC2A4RGQ9NR83 387 aa15.37■□□□□ 0.05
SHMT2-208ENST00000553868 CISHQ9NSE2 258 aa15.37■□□□□ 0.05
SHMT2-208ENST00000553868 NUMBLQ9Y6R0 609 aa15.37■□□□□ 0.05
SHMT2-208ENST00000553868 CLUHO75153 1309 aa15.37■□□□□ 0.05
SHMT2-208ENST00000553868 RALGAPA1Q6GYQ0 2036 aa15.36■□□□□ 0.05
SHMT2-208ENST00000553868 CCDC195A0A1B0GUA6 201 aa15.36■□□□□ 0.05
SHMT2-208ENST00000553868 FAM170BA6NMN3 283 aa15.36■□□□□ 0.05
SHMT2-208ENST00000553868 LCA5LO95447 670 aa15.36■□□□□ 0.05
SHMT2-208ENST00000553868 ACO1P21399 889 aaKnown RBP15.36■□□□□ 0.05
SHMT2-208ENST00000553868 HTR4Q13639 388 aa15.36■□□□□ 0.05
SHMT2-208ENST00000553868 ASTE1Q2TB18 679 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-208ENST00000553868 TMEM270Q6UE05 265 aa15.36■□□□□ 0.05
SHMT2-208ENST00000553868 SCARA5Q6ZMJ2 495 aa15.36■□□□□ 0.05
SHMT2-208ENST00000553868 PRR23CQ6ZRP0 262 aa15.36■□□□□ 0.05
SHMT2-208ENST00000553868 ZNF571Q7Z3V5 609 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-208ENST00000553868 RBBP8NLQ8NC74 664 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-208ENST00000553868 MMS19Q96T76 1030 aa15.36■□□□□ 0.05
SHMT2-208ENST00000553868 AGPAT1Q99943 283 aa15.36■□□□□ 0.05
SHMT2-208ENST00000553868 DESI2Q9BSY9 194 aa15.36■□□□□ 0.05
SHMT2-208ENST00000553868 CXCL16Q9H2A7 254 aa15.36■□□□□ 0.05
SHMT2-208ENST00000553868 SEMA4GQ9NTN9 838 aa15.36■□□□□ 0.05
SHMT2-208ENST00000553868 SPTLC3Q9NUV7 552 aa15.36■□□□□ 0.05
SHMT2-208ENST00000553868 INPP5FQ9Y2H2 1132 aa15.36■□□□□ 0.05
SHMT2-208ENST00000553868 ARHGEF37A1IGU5 675 aa15.35■□□□□ 0.05
SHMT2-208ENST00000553868 MEIS3P2A8K0S8 358 aa15.35■□□□□ 0.05
SHMT2-208ENST00000553868 KPNA7A9QM74 516 aa15.35■□□□□ 0.05
SHMT2-208ENST00000553868 RFPL2O75678 378 aa15.35■□□□□ 0.05
SHMT2-208ENST00000553868 CNPP09543 421 aaKnown RBP15.35■□□□□ 0.05
SHMT2-208ENST00000553868 FAM163BP0C2L3 166 aa15.35■□□□□ 0.05
SHMT2-208ENST00000553868 CYP11B1P15538 503 aa15.35■□□□□ 0.05
SHMT2-208ENST00000553868 CD58P19256 250 aa15.35■□□□□ 0.05
SHMT2-208ENST00000553868 CLCN1P35523 988 aa15.35■□□□□ 0.05
SHMT2-208ENST00000553868 TUSC3Q13454 348 aa15.35■□□□□ 0.05
SHMT2-208ENST00000553868 NOMO2Q5JPE7 1267 aa15.35■□□□□ 0.05
SHMT2-208ENST00000553868 GPIHBP1Q8IV16 184 aa15.35■□□□□ 0.05
SHMT2-208ENST00000553868 UBR7Q8N806 425 aa15.35■□□□□ 0.05
SHMT2-208ENST00000553868 GSTCDQ8NEC7 633 aa15.35■□□□□ 0.05
SHMT2-208ENST00000553868 EPS8L1Q8TE68 723 aa15.35■□□□□ 0.05
SHMT2-208ENST00000553868 ELMO3Q96BJ8 720 aa15.35■□□□□ 0.05
SHMT2-208ENST00000553868 TSGA10Q9BZW7 698 aa15.35■□□□□ 0.05
SHMT2-208ENST00000553868 MAN1C1Q9NR34 630 aa15.35■□□□□ 0.05
SHMT2-208ENST00000553868 TRMT1Q9NXH9 659 aaKnown RBP15.35■□□□□ 0.05
SHMT2-208ENST00000553868 GDAP2Q9NXN4 497 aa15.35■□□□□ 0.05
SHMT2-208ENST00000553868 ADAMTS1Q9UHI8 967 aa15.35■□□□□ 0.05
SHMT2-208ENST00000553868 POLIQ9UNA4 740 aa15.35■□□□□ 0.05
SHMT2-208ENST00000553868 SNX9Q9Y5X1 595 aa15.35■□□□□ 0.05
SHMT2-208ENST00000553868 ATP8B3O60423 1300 aa15.35■□□□□ 0.05
SHMT2-208ENST00000553868 NBEAQ8NFP9 2946 aa15.35■□□□□ 0.05
SHMT2-208ENST00000553868 ANHXE9PGG2 379 aa15.34■□□□□ 0.05
SHMT2-208ENST00000553868 KIF2AO00139 706 aaPredicted RBP15.34■□□□□ 0.05
SHMT2-208ENST00000553868 PODXLO00592 558 aa15.34■□□□□ 0.05
SHMT2-208ENST00000553868 TUBB4AP04350 444 aa15.34■□□□□ 0.05
SHMT2-208ENST00000553868 PAEPP09466 180 aa15.34■□□□□ 0.05
SHMT2-208ENST00000553868 LAMP2P13473 410 aa15.34■□□□□ 0.05
SHMT2-208ENST00000553868 MAGEA1P43355 309 aa15.34■□□□□ 0.05
SHMT2-208ENST00000553868 VAV2P52735 878 aa15.34■□□□□ 0.05
SHMT2-208ENST00000553868 CDR2Q01850 454 aa15.34■□□□□ 0.05
SHMT2-208ENST00000553868 SOX4Q06945 474 aaPredicted RBP15.34■□□□□ 0.05
SHMT2-208ENST00000553868 ARHGAP29Q52LW3 1261 aa15.34■□□□□ 0.05
SHMT2-208ENST00000553868 PPP1R2P3Q6NXS1 205 aa15.34■□□□□ 0.05
SHMT2-208ENST00000553868 UNQ6494/PRO21346Q6UXR6 183 aa15.34■□□□□ 0.05
SHMT2-208ENST00000553868 TRIM72Q6ZMU5 477 aa15.34■□□□□ 0.05
SHMT2-208ENST00000553868 ZNF662Q6ZS27 426 aa15.34■□□□□ 0.05
SHMT2-208ENST00000553868 GET4Q7L5D6 327 aaPredicted RBP15.34■□□□□ 0.05
SHMT2-208ENST00000553868 DPH6Q7L8W6 267 aa15.34■□□□□ 0.05
SHMT2-208ENST00000553868 DDX53Q86TM3 631 aaKnown RBP15.34■□□□□ 0.05
SHMT2-208ENST00000553868 ACRBPQ8NEB7 543 aa15.34■□□□□ 0.05
SHMT2-208ENST00000553868 NXPE3Q969Y0 559 aa15.34■□□□□ 0.05
SHMT2-208ENST00000553868 IGSF21Q96ID5 467 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms