RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 ALDH1A2O94788 518 aa9.76□□□□□ -0.85
PRKCH-208ENST00000553846 KAT7O95251 611 aa9.76□□□□□ -0.85
PRKCH-208ENST00000553846 PRB1P04280 392 aa9.76□□□□□ -0.85
PRKCH-208ENST00000553846 CKMP06732 381 aa9.76□□□□□ -0.85
PRKCH-208ENST00000553846 GABRG2P18507 467 aa9.76□□□□□ -0.85
PRKCH-208ENST00000553846 CYP2F1P24903 491 aa9.76□□□□□ -0.85
PRKCH-208ENST00000553846 TOB1P50616 345 aaPredicted RBP9.76□□□□□ -0.85
PRKCH-208ENST00000553846 FOSBP53539 338 aa9.76□□□□□ -0.85
PRKCH-208ENST00000553846 TMEM132DQ14C87 1099 aa9.76□□□□□ -0.85
PRKCH-208ENST00000553846 CFAP221Q4G0U5 840 aa9.76□□□□□ -0.85
PRKCH-208ENST00000553846 TTC38Q5R3I4 469 aa9.76□□□□□ -0.85
PRKCH-208ENST00000553846 LMBRD2Q68DH5 695 aaPredicted RBP9.76□□□□□ -0.85
PRKCH-208ENST00000553846 RHBDF2Q6PJF5 856 aa9.76□□□□□ -0.85
PRKCH-208ENST00000553846 TOGARAM2Q6ZUX3 1019 aa9.76□□□□□ -0.85
PRKCH-208ENST00000553846 TMPRSS7Q7RTY8 843 aa9.76□□□□□ -0.85
PRKCH-208ENST00000553846 NAXDQ8IW45 347 aa9.76□□□□□ -0.85
PRKCH-208ENST00000553846 CD302Q8IX05 232 aa9.76□□□□□ -0.85
PRKCH-208ENST00000553846 ADGRG2Q8IZP9 1017 aa9.76□□□□□ -0.85
PRKCH-208ENST00000553846 PDCL2Q8N4E4 241 aa9.76□□□□□ -0.85
PRKCH-208ENST00000553846 HMGB4Q8WW32 186 aa9.76□□□□□ -0.85
PRKCH-208ENST00000553846 YTHDC1Q96MU7 727 aaKnown RBP9.76□□□□□ -0.85
PRKCH-208ENST00000553846 PNMA5Q96PV4 448 aa9.76□□□□□ -0.85
PRKCH-208ENST00000553846 PYM1Q9BRP8 204 aaKnown RBP9.76□□□□□ -0.85
PRKCH-208ENST00000553846 FOXP1Q9H334 677 aaPredicted RBP9.76□□□□□ -0.85
PRKCH-208ENST00000553846 RPF1Q9H9Y2 349 aaKnown RBP9.76□□□□□ -0.85
PRKCH-208ENST00000553846 TRPC7Q9HCX4 862 aa9.76□□□□□ -0.85
PRKCH-208ENST00000553846 KIAA1522Q9P206 1035 aaPredicted RBP9.76□□□□□ -0.85
PRKCH-208ENST00000553846 UXTQ9UBK9 157 aaPredicted RBP9.76□□□□□ -0.85
PRKCH-208ENST00000553846 PCOLCE2Q9UKZ9 415 aa9.76□□□□□ -0.85
PRKCH-208ENST00000553846 L1RE1Q9UN81 338 aa9.76□□□□□ -0.85
PRKCH-208ENST00000553846 MAGED2Q9UNF1 606 aaPredicted RBP9.76□□□□□ -0.85
PRKCH-208ENST00000553846 DNM3Q9UQ16 869 aa9.76□□□□□ -0.85
PRKCH-208ENST00000553846 COL12A1Q99715 3063 aa9.76□□□□□ -0.85
PRKCH-208ENST00000553846 SHROOM3Q8TF72 1996 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 COL6A6A6NMZ7 2263 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 A0A1W2PQD8 194 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 TCRBV21S2A2A0A5A6 115 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 LEFTY2O00292 366 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 AP5Z1O43299 807 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 HCRTO43612 131 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 PRPF40AO75400 957 aaKnown RBP9.75□□□□□ -0.85
PRKCH-208ENST00000553846 PFKLP17858 780 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 TIE1P35590 1138 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 TRAPPC10P48553 1259 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 TAF6P49848 677 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 ZNF131P52739 623 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 WNT7BP56706 349 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 SLC7A9P82251 487 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 ZNF33AQ06730 810 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 RAD51AP2Q09MP3 1159 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 NR1H3Q13133 447 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 DHCR24Q15392 516 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 TAF12Q16514 161 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 NFE2Q16621 373 aaPredicted RBP9.75□□□□□ -0.85
PRKCH-208ENST00000553846 INTS6LQ5JSJ4 861 aaKnown RBP9.75□□□□□ -0.85
PRKCH-208ENST00000553846 EOGTQ5NDL2 527 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 CRELD2Q6UXH1 353 aaPredicted RBP9.75□□□□□ -0.85
PRKCH-208ENST00000553846 DBX2Q6ZNG2 339 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 LIMS2Q7Z4I7 341 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 RABEPKQ7Z6M1 372 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 FILIP1Q7Z7B0 1213 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 MIB1Q86YT6 1006 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 SCUBE3Q8IX30 993 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 DCP1BQ8IZD4 617 aaKnown RBP9.75□□□□□ -0.85
PRKCH-208ENST00000553846 SYT2Q8N9I0 419 aaPredicted RBP9.75□□□□□ -0.85
PRKCH-208ENST00000553846 ZFRQ96KR1 1074 aaKnown RBP9.75□□□□□ -0.85
PRKCH-208ENST00000553846 TTLL2Q9BWV7 592 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 ASB7Q9H672 318 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 POLMQ9NP87 494 aaPredicted RBP9.75□□□□□ -0.85
PRKCH-208ENST00000553846 CD93Q9NPY3 652 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 CALCOCO1Q9P1Z2 691 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 STYXL1Q9Y6J8 313 aa9.75□□□□□ -0.85
PRKCH-208ENST00000553846 KNTC1P50748 2209 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 NPHP3-ACAD11A0A0J9YXS1 232 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 KPNA7A9QM74 516 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 TISP43B9A030 160 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 TK2O00142 265 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 GABRDO14764 452 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 HNRNPDLO14979 420 aaKnown RBP9.74□□□□□ -0.85
PRKCH-208ENST00000553846 MAP3K13O43283 966 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 OAS1P00973 400 aaKnown RBP9.74□□□□□ -0.85
PRKCH-208ENST00000553846 PLA2G2AP14555 144 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 RDXP35241 583 aaKnown RBP9.74□□□□□ -0.85
PRKCH-208ENST00000553846 GRIA2P42262 883 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 MAGEA11P43364 429 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 TNFRSF4P43489 277 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 SMTNP53814 917 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 USP46P62068 366 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 BNC1Q01954 994 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 GUCY1B3Q02153 619 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 RPL6Q02878 288 aaKnown RBP9.74□□□□□ -0.85
PRKCH-208ENST00000553846 GRIK2Q13002 908 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 BYSLQ13895 437 aaKnown RBP9.74□□□□□ -0.85
PRKCH-208ENST00000553846 TMEM119Q4V9L6 283 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 SLC36A4Q6YBV0 504 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 OSTM1Q86WC4 334 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 METTL23Q86XA0 190 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 MARCH9Q86YJ5 346 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 THEM5Q8N1Q8 247 aa9.74□□□□□ -0.85
PRKCH-208ENST00000553846 DEFB119Q8N690 84 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms