RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 PRSS33Q8NF86 280 aa10.85□□□□□ -0.67
HNRNPC-208ENST00000553753 BPIFB1Q8TDL5 484 aa10.85□□□□□ -0.67
HNRNPC-208ENST00000553753 FAM122AQ96E09 287 aa10.85□□□□□ -0.67
HNRNPC-208ENST00000553753 SMARCD1Q96GM5 515 aa10.85□□□□□ -0.67
HNRNPC-208ENST00000553753 KCNK16Q96T55 309 aa10.85□□□□□ -0.67
HNRNPC-208ENST00000553753 DDX23Q9BUQ8 820 aaKnown RBP10.85□□□□□ -0.67
HNRNPC-208ENST00000553753 TTLL2Q9BWV7 592 aa10.85□□□□□ -0.67
HNRNPC-208ENST00000553753 NT5C1AQ9BXI3 368 aa10.85□□□□□ -0.67
HNRNPC-208ENST00000553753 TDP1Q9NUW8 608 aa10.85□□□□□ -0.67
HNRNPC-208ENST00000553753 ATP8B3O60423 1300 aa10.85□□□□□ -0.67
HNRNPC-208ENST00000553753 ARNTLO00327 626 aa10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 GALR2O43603 387 aaPredicted RBP10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 CILPO75339 1184 aa10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 CD58P19256 250 aa10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 CD72P21854 359 aa10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 PLA2G5P39877 138 aa10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 PPP3CCP48454 512 aa10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 STX17P56962 302 aa10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 TCF15Q12870 199 aa10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 CCDC40Q4G0X9 1142 aa10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 ARHGAP29Q52LW3 1261 aa10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 ZNF852Q6ZMS4 543 aa10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 TPRG1Q6ZUI0 275 aa10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 NUP93Q8N1F7 819 aa10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 PJA1Q8NG27 643 aa10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 SLC2A14Q8TDB8 520 aa10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 USP13Q92995 863 aaPredicted RBP10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 TWNKQ96RR1 684 aa10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 CYP2S1Q96SQ9 504 aa10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 FOXQ1Q9C009 403 aa10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 DNAI2Q9GZS0 605 aa10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 TRPC7Q9HCX4 862 aa10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 DMAP1Q9NPF5 467 aaPredicted RBP10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 THG1LQ9NWX6 298 aaKnown RBP10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 CCL26Q9Y258 94 aa10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 NUP210Q8TEM1 1887 aaPredicted RBP10.84□□□□□ -0.67
HNRNPC-208ENST00000553753 OBSL1O75147 1896 aa10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 AP1G2O75843 785 aa10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 GNA14O95837 355 aa10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 CKMP06732 381 aa10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 DCNP07585 359 aaKnown RBP10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 CCDC130P13994 396 aa10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 FMO5P49326 533 aa10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 PTPN5P54829 565 aa10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 TTC39CQ8N584 583 aa10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 CSGALNACT1Q8TDX6 532 aa10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 WHAMMQ8TF30 809 aa10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 TATDN2Q93075 761 aa10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 CYFIP2Q96F07 1278 aa10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 ZFYVE19Q96K21 471 aa10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 IPO9Q96P70 1041 aaKnown RBP10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 SLITRK1Q96PX8 696 aa10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 SLC22A12Q96S37 553 aa10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 NELL2Q99435 816 aa10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 SRRTQ9BXP5 876 aaKnown RBP10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 CLSTN2Q9H4D0 955 aa10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 FAM124BQ9H5Z6 455 aaPredicted RBP10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 KRT82Q9NSB4 513 aa10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 CISHQ9NSE2 258 aa10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 FAM49BQ9NUQ9 324 aa10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 TRPM5Q9NZQ8 1165 aa10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 ZNF638Q14966 1978 aaKnown RBP10.83□□□□□ -0.68
HNRNPC-208ENST00000553753 TRAV19A0A0A6YYK7 116 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 C2orf78A6NCI8 922 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 ZNF840PA6NDX5 716 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 FAM170BA6NMN3 283 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 MAN2B1O00754 1011 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 PMM2O15305 246 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 RTN3O95197 1032 aaPredicted RBP10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 USP17L7P0C7H9 530 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 GLULP15104 373 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 HDCP19113 662 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 YWHAQP27348 245 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 MLLT6P55198 1093 aaPredicted RBP10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 PLCB2Q00722 1185 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 NHLH1Q02575 133 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 IFRD2Q12894 506 aaPredicted RBP10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 TAF10Q12962 218 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 ZNF268Q14587 947 aaPredicted RBP10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 UBXN2BQ14CS0 331 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 ZNF394Q53GI3 561 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 CCDC105Q8IYK2 499 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 ARL14EPQ8N8R7 260 aaPredicted RBP10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 DTWD2Q8NBA8 298 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 GBP4Q96PP9 640 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 HNRNPABQ99729 332 aaKnown RBP10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 SMOQ99835 787 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 ARID3AQ99856 593 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 OSBPL6Q9BZF3 934 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 IRF2BPLQ9H1B7 796 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 KIF9Q9HAQ2 790 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 CSNK1G1Q9HCP0 422 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 LTB4R2Q9NPC1 389 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 LMBRD1Q9NUN5 540 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 GCNT4Q9P109 453 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 DLGAP2Q9P1A6 1054 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 RWDD2AQ9UIY3 292 aa10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 MRPS17Q9Y2R5 130 aaKnown RBP10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 MTF2Q9Y483 593 aaPredicted RBP10.82□□□□□ -0.68
HNRNPC-208ENST00000553753 PIAS3Q9Y6X2 628 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms