RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 FBXL13Q8NEE6 735 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 OR8K1Q8NGG5 319 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 RSPH1Q8WYR4 309 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 TAF4BQ92750 862 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 CCDC127Q96BQ5 260 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 ZBTB10Q96DT7 871 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 FAXDC2Q96IV6 333 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 CPB2Q96IY4 423 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 HEXIM2Q96MH2 286 aaKnown RBP5.39□□□□□ -1.55
VTI1B-202ENST00000553619 CGRRF1Q99675 332 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 TRAIPQ9BWF2 469 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 DNAI2Q9GZS0 605 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 CDT1Q9H211 546 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 PDZD7Q9H5P4 517 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 C1orf112Q9NSG2 853 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 TRMT13Q9NUP7 481 aaKnown RBP5.39□□□□□ -1.55
VTI1B-202ENST00000553619 AGPAT5Q9NUQ2 364 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 PARP2Q9UGN5 583 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 FBXL5Q9UKA1 691 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 CPSF3Q9UKF6 684 aaKnown RBP5.39□□□□□ -1.55
VTI1B-202ENST00000553619 MYO6Q9UM54 1294 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 CAPN11Q9UMQ6 739 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 PIN4Q9Y237 131 aaKnown RBP5.39□□□□□ -1.55
VTI1B-202ENST00000553619 DERAQ9Y315 318 aa5.39□□□□□ -1.55
VTI1B-202ENST00000553619 NOC2LQ9Y3T9 749 aaKnown RBP5.39□□□□□ -1.55
VTI1B-202ENST00000553619 CITO14578 2027 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 PRAMEF27A3QJZ7 478 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 LRRIQ3A6PVS8 624 aaPredicted RBP5.38□□□□□ -1.55
VTI1B-202ENST00000553619 LACTBL1A8MY62 500 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 TISP43B9A030 160 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 ABLIM1O14639 778 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 B4GALT5O43286 388 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 CCP110O43303 1012 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 ZNF623O75123 536 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 CSDE1O75534 798 aaKnown RBP5.38□□□□□ -1.55
VTI1B-202ENST00000553619 C4BPAP04003 597 aaKnown RBP5.38□□□□□ -1.55
VTI1B-202ENST00000553619 ADRB2P07550 413 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 CTSHP09668 335 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 IQCF3P0C7M6 154 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 P4HA1P13674 534 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 ATF7P17544 494 aaPredicted RBP5.38□□□□□ -1.55
VTI1B-202ENST00000553619 CYP3A5P20815 502 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 FGFR4P22455 802 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 PAX3P23760 479 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 TBXAS1P24557 533 aaPredicted RBP5.38□□□□□ -1.55
VTI1B-202ENST00000553619 HOXA11P31270 313 aaPredicted RBP5.38□□□□□ -1.55
VTI1B-202ENST00000553619 ATICP31939 592 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 CASP14P31944 242 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 NTF4P34130 210 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 RFC2P35250 354 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 KRT9P35527 623 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 GCLMP48507 274 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 YWHAEP62258 255 aaKnown RBP5.38□□□□□ -1.55
VTI1B-202ENST00000553619 MYL7Q01449 175 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 TBX2Q13207 712 aaPredicted RBP5.38□□□□□ -1.55
VTI1B-202ENST00000553619 BIRC3Q13489 604 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 SGSM1Q2NKQ1 1148 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 TRIM71Q2Q1W2 868 aaKnown RBP5.38□□□□□ -1.55
VTI1B-202ENST00000553619 EEF1DP3Q658K8 133 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 LRRC8DQ7L1W4 858 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 FAM214BQ7L5A3 538 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 ENOSF1Q7L5Y1 443 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 HDXQ7Z353 690 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 MRPL10Q7Z7H8 261 aaKnown RBP5.38□□□□□ -1.55
VTI1B-202ENST00000553619 FAM228AQ86W67 206 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 TMTC1Q8IUR5 882 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 LRRC8AQ8IWT6 810 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 TXLNBQ8N3L3 684 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 TTC39CQ8N584 583 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 BEST2Q8NFU1 509 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 PPP1R13LQ8WUF5 828 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 CPLX3Q8WVH0 158 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 SEPT8Q92599 483 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 SYN2Q92777 582 aaPredicted RBP5.38□□□□□ -1.55
VTI1B-202ENST00000553619 JAKMIP2Q96AA8 810 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 PAWRQ96IZ0 340 aaKnown RBP5.38□□□□□ -1.55
VTI1B-202ENST00000553619 NT5C1BQ96P26 610 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 SPAG5Q96R06 1193 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 PANX2Q96RD6 677 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 RPS6KC1Q96S38 1066 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 LSM14BQ9BX40 385 aaKnown RBP5.38□□□□□ -1.55
VTI1B-202ENST00000553619 STK33Q9BYT3 514 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 MCOLN1Q9GZU1 580 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 TMEM117Q9H0C3 514 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 TRPV6Q9H1D0 765 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 TNKS2Q9H2K2 1166 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 IKZF4Q9H2S9 585 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 FAM124BQ9H5Z6 455 aaPredicted RBP5.38□□□□□ -1.55
VTI1B-202ENST00000553619 PDE11AQ9HCR9 933 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 ERVK-5Q9HDB9 667 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 PRDM7Q9NQW5 492 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 SLC38A7Q9NVC3 462 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 INTS13Q9NVM9 706 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 RAB20Q9NX57 234 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 CACNA2D2Q9NY47 1150 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 CEP72Q9P209 647 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 PADI3Q9ULW8 664 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 SIK3Q9Y2K2 1263 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 GIT1Q9Y2X7 761 aa5.38□□□□□ -1.55
VTI1B-202ENST00000553619 COQ4Q9Y3A0 265 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms