RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 MAN2B1O00754 1011 aa16.28■□□□□ 0.2
SHMT2-204ENST00000553324 CILPO75339 1184 aa16.28■□□□□ 0.2
SHMT2-204ENST00000553324 FMO5P49326 533 aa16.28■□□□□ 0.2
SHMT2-204ENST00000553324 VCPP55072 806 aaKnown RBP16.28■□□□□ 0.2
SHMT2-204ENST00000553324 MARSP56192 900 aaKnown RBP16.28■□□□□ 0.2
SHMT2-204ENST00000553324 STX17P56962 302 aa16.28■□□□□ 0.2
SHMT2-204ENST00000553324 YWHAEP62258 255 aaKnown RBP16.28■□□□□ 0.2
SHMT2-204ENST00000553324 ZNF268Q14587 947 aaPredicted RBP16.28■□□□□ 0.2
SHMT2-204ENST00000553324 TXNDC8Q6A555 127 aa16.28■□□□□ 0.2
SHMT2-204ENST00000553324 ZNF852Q6ZMS4 543 aa16.28■□□□□ 0.2
SHMT2-204ENST00000553324 FAM35AQ86V20 835 aa16.28■□□□□ 0.2
SHMT2-204ENST00000553324 BPIFB1Q8TDL5 484 aa16.28■□□□□ 0.2
SHMT2-204ENST00000553324 CSGALNACT1Q8TDX6 532 aa16.28■□□□□ 0.2
SHMT2-204ENST00000553324 MSANTD3Q96H12 275 aa16.28■□□□□ 0.2
SHMT2-204ENST00000553324 HNRNPABQ99729 332 aaKnown RBP16.28■□□□□ 0.2
SHMT2-204ENST00000553324 OSBPL6Q9BZF3 934 aa16.28■□□□□ 0.2
SHMT2-204ENST00000553324 NUP62CLQ9H1M0 184 aa16.28■□□□□ 0.2
SHMT2-204ENST00000553324 DACH1Q9UI36 760 aa16.28■□□□□ 0.2
SHMT2-204ENST00000553324 NCAM2O15394 837 aa16.27■□□□□ 0.2
SHMT2-204ENST00000553324 AP1G2O75843 785 aa16.27■□□□□ 0.2
SHMT2-204ENST00000553324 USP17L7P0C7H9 530 aa16.27■□□□□ 0.2
SHMT2-204ENST00000553324 CD58P19256 250 aa16.27■□□□□ 0.2
SHMT2-204ENST00000553324 TBXAS1P24557 533 aaPredicted RBP16.27■□□□□ 0.2
SHMT2-204ENST00000553324 YWHAQP27348 245 aa16.27■□□□□ 0.2
SHMT2-204ENST00000553324 PTPN5P54829 565 aa16.27■□□□□ 0.2
SHMT2-204ENST00000553324 CT47A1Q5JQC4 288 aaPredicted RBP16.27■□□□□ 0.2
SHMT2-204ENST00000553324 IER5LQ5T953 404 aa16.27■□□□□ 0.2
SHMT2-204ENST00000553324 CWF19L1Q69YN2 538 aaKnown RBP16.27■□□□□ 0.2
SHMT2-204ENST00000553324 PAQR9Q6ZVX9 377 aa16.27■□□□□ 0.2
SHMT2-204ENST00000553324 FUKQ8N0W3 1084 aa16.27■□□□□ 0.2
SHMT2-204ENST00000553324 TMEM105Q8N8V8 129 aa16.27■□□□□ 0.2
SHMT2-204ENST00000553324 C12orf29Q8N999 325 aa16.27■□□□□ 0.2
SHMT2-204ENST00000553324 PDZD8Q8NEN9 1154 aa16.27■□□□□ 0.2
SHMT2-204ENST00000553324 SLC2A14Q8TDB8 520 aa16.27■□□□□ 0.2
SHMT2-204ENST00000553324 OVCA2Q8WZ82 227 aa16.27■□□□□ 0.2
SHMT2-204ENST00000553324 CYFIP2Q96F07 1278 aa16.27■□□□□ 0.2
SHMT2-204ENST00000553324 DDX23Q9BUQ8 820 aaKnown RBP16.27■□□□□ 0.2
SHMT2-204ENST00000553324 CSNK1G1Q9HCP0 422 aa16.27■□□□□ 0.2
SHMT2-204ENST00000553324 CISHQ9NSE2 258 aa16.27■□□□□ 0.2
SHMT2-204ENST00000553324 RAPGEFL1Q9UHV5 662 aa16.27■□□□□ 0.2
SHMT2-204ENST00000553324 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.27■□□□□ 0.2
SHMT2-204ENST00000553324 FAM200BP0CF97 657 aa16.26■□□□□ 0.19
SHMT2-204ENST00000553324 HDCP19113 662 aa16.26■□□□□ 0.19
SHMT2-204ENST00000553324 CC2D1AQ6P1N0 951 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-204ENST00000553324 TRIM59Q8IWR1 403 aa16.26■□□□□ 0.19
SHMT2-204ENST00000553324 STKLD1Q8NE28 680 aa16.26■□□□□ 0.19
SHMT2-204ENST00000553324 USP13Q92995 863 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-204ENST00000553324 TATDN2Q93075 761 aa16.26■□□□□ 0.19
SHMT2-204ENST00000553324 TMEM176AQ96HP8 235 aa16.26■□□□□ 0.19
SHMT2-204ENST00000553324 HEXIM2Q96MH2 286 aaKnown RBP16.26■□□□□ 0.19
SHMT2-204ENST00000553324 KCNK16Q96T55 309 aa16.26■□□□□ 0.19
SHMT2-204ENST00000553324 FBXO44Q9H4M3 255 aa16.26■□□□□ 0.19
SHMT2-204ENST00000553324 C8orf33Q9H7E9 229 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-204ENST00000553324 TRPC7Q9HCX4 862 aa16.26■□□□□ 0.19
SHMT2-204ENST00000553324 HEBP1Q9NRV9 189 aa16.26■□□□□ 0.19
SHMT2-204ENST00000553324 ZNF840PA6NDX5 716 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 GALR2O43603 387 aaPredicted RBP16.25■□□□□ 0.19
SHMT2-204ENST00000553324 PI15O43692 258 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 LRRN2O75325 713 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 TADA3O75528 432 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 AFPP02771 609 aaKnown RBP16.25■□□□□ 0.19
SHMT2-204ENST00000553324 CKMP06732 381 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 CCDC130P13994 396 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 ERCC5P28715 1186 aaPredicted RBP16.25■□□□□ 0.19
SHMT2-204ENST00000553324 MAGEA9P43362 315 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 CACNA2D1P54289 1103 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 SLC8A3P57103 927 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 USP46P62068 366 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 KCNH2Q12809 1159 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 TAF10Q12962 218 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 CUL2Q13617 745 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 TPD52L1Q16890 204 aaPredicted RBP16.25■□□□□ 0.19
SHMT2-204ENST00000553324 TPRG1Q6ZUI0 275 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 GPIHBP1Q8IV16 184 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 KIAA1958Q8N8K9 716 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 PJA1Q8NG27 643 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 WHAMMQ8TF30 809 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 RSPRY1Q96DX4 576 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 FAM122AQ96E09 287 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 PNPLA8Q9NP80 782 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 KRT82Q9NSB4 513 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 FAM49BQ9NUQ9 324 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 IL37Q9NZH6 218 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 HMGXB4Q9UGU5 601 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 KIAA1257Q9ULG3 409 aa16.25■□□□□ 0.19
SHMT2-204ENST00000553324 ZDBF2Q9HCK1 2354 aa16.24■□□□□ 0.19
SHMT2-204ENST00000553324 NCANO14594 1321 aa16.24■□□□□ 0.19
SHMT2-204ENST00000553324 FAM170BA6NMN3 283 aa16.24■□□□□ 0.19
SHMT2-204ENST00000553324 ARNTLO00327 626 aa16.24■□□□□ 0.19
SHMT2-204ENST00000553324 TNFRSF10BO14763 440 aa16.24■□□□□ 0.19
SHMT2-204ENST00000553324 PRAMEF12O95522 483 aa16.24■□□□□ 0.19
SHMT2-204ENST00000553324 PRKCSHP14314 528 aaPredicted RBP16.24■□□□□ 0.19
SHMT2-204ENST00000553324 KPNA1P52294 538 aaPredicted RBP16.24■□□□□ 0.19
SHMT2-204ENST00000553324 SLC5A3P53794 718 aa16.24■□□□□ 0.19
SHMT2-204ENST00000553324 MAP3K7CLP57077 242 aa16.24■□□□□ 0.19
SHMT2-204ENST00000553324 AMPD2Q01433 879 aa16.24■□□□□ 0.19
SHMT2-204ENST00000553324 ORC1Q13415 861 aa16.24■□□□□ 0.19
SHMT2-204ENST00000553324 ZNF394Q53GI3 561 aa16.24■□□□□ 0.19
SHMT2-204ENST00000553324 SNX30Q5VWJ9 437 aa16.24■□□□□ 0.19
SHMT2-204ENST00000553324 DTWD2Q8NBA8 298 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms