RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 NUDT2P50583 147 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 GABPAQ06546 454 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 SLC12A1Q13621 1099 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 PDCD2Q16342 344 aaPredicted RBP10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 WLSQ5T9L3 541 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 CIAPIN1Q6FI81 312 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 SLC51AQ86UW1 340 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 EXOC8Q8IYI6 725 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 APOPT1Q96IL0 206 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 TMEM109Q9BVC6 243 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 C2orf40Q9H1Z8 148 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 SEC24DO94855 1032 aaPredicted RBP10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 HSPA8P11142 646 aaKnown RBP10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 EFHC1Q5JVL4 640 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 RWDD4Q6NW29 188 aaKnown RBP10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 KRT27Q7Z3Y8 459 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 SYTL5Q8TDW5 730 aaPredicted RBP10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 LPAR1Q92633 364 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 MKL1Q969V6 931 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 CNBD2Q96M20 576 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 TSPYL2Q9H2G4 693 aaPredicted RBP10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 MRPL46Q9H2W6 279 aaKnown RBP10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 RHBDL2Q9NX52 303 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 SNX9Q9Y5X1 595 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 KIF1AQ12756 1690 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 A8MXQ7 604 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 MRPS9P82933 396 aaKnown RBP10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 FASTKD3Q14CZ7 662 aaKnown RBP10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 SPRED3Q2MJR0 410 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 PARP6Q2NL67 630 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 IYDQ6PHW0 289 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 TTLL6Q8N841 843 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 KIF12Q96FN5 646 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 DRC3Q9H069 523 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 LRMDAQ9H2I8 198 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 LRRC4CQ9HCJ2 640 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 USP18Q9UMW8 372 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 XPO1O14980 1071 aaKnown RBP10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 MCF2P10911 925 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 RAP1GAPP47736 663 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 CLK2P49760 499 aaKnown RBP10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 KPNA2P52292 529 aaKnown RBP10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 FLOT2Q14254 428 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 MAP4K3Q8IVH8 894 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 PYDC1Q8WXC3 89 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 DTNBP1Q96EV8 351 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 PDCD2LQ9BRP1 358 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 C20orf96Q9NUD7 363 aaPredicted RBP10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 NMRK1Q9NWW6 199 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 ARHGAP26Q9UNA1 814 aa10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 FNDC3AQ9Y2H6 1198 aaKnown RBP10.63□□□□□ -0.71
SMARCC2-209ENST00000550164 E9PBE3 544 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 KLHL41O60662 606 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 APOEP02649 317 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 ZFXP17010 805 aaPredicted RBP10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 GLRA2P23416 452 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 SERPINB5P36952 375 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 PHKA2P46019 1235 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 GTF2BQ00403 316 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 EFTUD2Q15029 972 aaKnown RBP eCLIP10.62□□□□□ -0.716e-7■■■■□ 25.9
SMARCC2-209ENST00000550164 TCHHL1Q5QJ38 904 aaPredicted RBP10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 LRRC8EQ6NSJ5 796 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 POTEAQ6S8J7 498 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 VSTM1Q6UX27 236 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 DEFB107AQ8IZN7 70 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 VCPIP1Q96JH7 1222 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 CCDC138Q96M89 665 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 SLITRK1Q96PX8 696 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 CGRRF1Q99675 332 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 HAUS8Q9BT25 410 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 CCDC68Q9H2F9 335 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 DENND2DQ9H6A0 471 aaPredicted RBP10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 PIH1D1Q9NWS0 290 aaKnown RBP10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 SLC17A7Q9P2U7 560 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 ADGRA3Q8IWK6 1321 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 DPPA5A6NC42 116 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 ITGB5P18084 799 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 FOXN2P32314 431 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 IL1RL1Q01638 556 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 Q3C1V9 767 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 CLNKQ7Z7G1 428 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 SDCCAG3Q96C92 435 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 TASP1Q9H6P5 420 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 XAB2Q9HCS7 855 aaKnown RBP10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 ARL8BQ9NVJ2 186 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 SOX13Q9UN79 622 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 COL1A1P02452 1464 aaPredicted RBP10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 C2orf71A6NGG8 1288 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 C2CD2LO14523 706 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 SLC4A1P02730 911 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 ABHD2P08910 425 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 KCNA4P22459 653 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 RSBN1LQ6PCB5 846 aaPredicted RBP10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 CATSPER4Q7RTX7 472 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 RFWD2Q8NHY2 731 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 SNRNP27Q8WVK2 155 aaKnown RBP10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 ZNF669Q96BR6 464 aaPredicted RBP10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 HOXC10Q9NYD6 342 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 FAM198AQ9UFP1 575 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 AURKCQ9UQB9 309 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms