RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 TRPV5Q9NQA5 729 aa12.56□□□□□ -0.4
LETMD1-221ENST00000550100 GKN1Q9NS71 199 aa12.56□□□□□ -0.4
LETMD1-221ENST00000550100 FRYLO94915 3013 aa12.56□□□□□ -0.4
LETMD1-221ENST00000550100 CHADO15335 359 aa12.55□□□□□ -0.4
LETMD1-221ENST00000550100 HOXC13P31276 330 aa12.55□□□□□ -0.4
LETMD1-221ENST00000550100 GTF2H1P32780 548 aa12.55□□□□□ -0.4
LETMD1-221ENST00000550100 NUBP1P53384 320 aa12.55□□□□□ -0.4
LETMD1-221ENST00000550100 STX17P56962 302 aa12.55□□□□□ -0.4
LETMD1-221ENST00000550100 FKBP3Q00688 224 aaKnown RBP12.55□□□□□ -0.4
LETMD1-221ENST00000550100 ENPEPQ07075 957 aa12.55□□□□□ -0.4
LETMD1-221ENST00000550100 ANGPT1Q15389 498 aa12.55□□□□□ -0.4
LETMD1-221ENST00000550100 MAPRE1Q15691 268 aaKnown RBP12.55□□□□□ -0.4
LETMD1-221ENST00000550100 NAIF1Q69YI7 327 aaPredicted RBP12.55□□□□□ -0.4
LETMD1-221ENST00000550100 KLHL10Q6JEL2 608 aa12.55□□□□□ -0.4
LETMD1-221ENST00000550100 BPIFB1Q8TDL5 484 aa12.55□□□□□ -0.4
LETMD1-221ENST00000550100 IRF7Q92985 503 aa12.55□□□□□ -0.4
LETMD1-221ENST00000550100 CLDN23Q96B33 292 aa12.55□□□□□ -0.4
LETMD1-221ENST00000550100 SHDQ96IW2 340 aa12.55□□□□□ -0.4
LETMD1-221ENST00000550100 FAM83CQ9BQN1 747 aa12.55□□□□□ -0.4
LETMD1-221ENST00000550100 TRPC7Q9HCX4 862 aa12.55□□□□□ -0.4
LETMD1-221ENST00000550100 HPS4Q9NQG7 708 aa12.55□□□□□ -0.4
LETMD1-221ENST00000550100 FAM49BQ9NUQ9 324 aa12.55□□□□□ -0.4
LETMD1-221ENST00000550100 TDP1Q9NUW8 608 aa12.55□□□□□ -0.4
LETMD1-221ENST00000550100 NDRG2Q9UN36 371 aaKnown RBP12.55□□□□□ -0.4
LETMD1-221ENST00000550100 PIAS3Q9Y6X2 628 aa12.55□□□□□ -0.4
LETMD1-221ENST00000550100 CFAP54Q96N23 3096 aa12.55□□□□□ -0.4
LETMD1-221ENST00000550100 GPR179Q6PRD1 2367 aa12.54□□□□□ -0.4
LETMD1-221ENST00000550100 ZNF840PA6NDX5 716 aa12.54□□□□□ -0.4
LETMD1-221ENST00000550100 CLSTN1O94985 981 aa12.54□□□□□ -0.4
LETMD1-221ENST00000550100 EPB41P11171 864 aaKnown RBP12.54□□□□□ -0.4
LETMD1-221ENST00000550100 ARSAP15289 507 aa12.54□□□□□ -0.4
LETMD1-221ENST00000550100 CD58P19256 250 aa12.54□□□□□ -0.4
LETMD1-221ENST00000550100 UBE2HP62256 183 aa12.54□□□□□ -0.4
LETMD1-221ENST00000550100 INCA1Q0VD86 236 aa12.54□□□□□ -0.4
LETMD1-221ENST00000550100 TAF10Q12962 218 aa12.54□□□□□ -0.4
LETMD1-221ENST00000550100 GAS6Q14393 721 aa12.54□□□□□ -0.4
LETMD1-221ENST00000550100 KRT39Q6A163 491 aa12.54□□□□□ -0.4
LETMD1-221ENST00000550100 DENND5BQ6ZUT9 1274 aa12.54□□□□□ -0.4
LETMD1-221ENST00000550100 GPRIN1Q7Z2K8 1008 aa12.54□□□□□ -0.4
LETMD1-221ENST00000550100 CELF5Q8N6W0 485 aaKnown RBP12.54□□□□□ -0.4
LETMD1-221ENST00000550100 SLC2A14Q8TDB8 520 aa12.54□□□□□ -0.4
LETMD1-221ENST00000550100 NELFBQ8WX92 580 aa12.54□□□□□ -0.4
LETMD1-221ENST00000550100 MRPS31Q92665 395 aaKnown RBP12.54□□□□□ -0.4
LETMD1-221ENST00000550100 ATOH1Q92858 354 aaPredicted RBP12.54□□□□□ -0.4
LETMD1-221ENST00000550100 SLC35C1Q96A29 364 aa12.54□□□□□ -0.4
LETMD1-221ENST00000550100 E2F7Q96AV8 911 aa12.54□□□□□ -0.4
LETMD1-221ENST00000550100 CCDC34Q96HJ3 373 aa12.54□□□□□ -0.4
LETMD1-221ENST00000550100 DHTKD1Q96HY7 919 aaPredicted RBP12.54□□□□□ -0.4
LETMD1-221ENST00000550100 GCNAQ96QF7 691 aa12.54□□□□□ -0.4
LETMD1-221ENST00000550100 PRRX2Q99811 253 aa12.54□□□□□ -0.4
LETMD1-221ENST00000550100 RAB20Q9NX57 234 aa12.54□□□□□ -0.4
LETMD1-221ENST00000550100 OBP2AQ9NY56 170 aa12.54□□□□□ -0.4
LETMD1-221ENST00000550100 IL37Q9NZH6 218 aa12.54□□□□□ -0.4
LETMD1-221ENST00000550100 CHORDC1Q9UHD1 332 aaPredicted RBP12.54□□□□□ -0.4
LETMD1-221ENST00000550100 CTNND2Q9UQB3 1225 aa12.54□□□□□ -0.4
LETMD1-221ENST00000550100 ATG2BQ96BY7 2078 aa12.54□□□□□ -0.4
LETMD1-221ENST00000550100 PTPRZ1P23471 2315 aaPredicted RBP12.54□□□□□ -0.4
LETMD1-221ENST00000550100 HHLA1C9JL84 531 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 DPYSL4O14531 572 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 TRIM66O15016 1216 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 SLC16A3O15427 465 aaKnown RBP12.53□□□□□ -0.4
LETMD1-221ENST00000550100 CILPO75339 1184 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 RFX1P22670 979 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 DDX6P26196 483 aaKnown RBP eCLIP12.53□□□□□ -0.4
LETMD1-221ENST00000550100 MRE11P49959 708 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 MXI1P50539 228 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 LRRC63Q05C16 580 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 DCAF17Q5H9S7 520 aaPredicted RBP12.53□□□□□ -0.4
LETMD1-221ENST00000550100 ZNF852Q6ZMS4 543 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 UNC93AQ86WB7 457 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 YAF2Q8IY57 180 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 FAM3CQ92520 227 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 TSG101Q99816 390 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 MED10Q9BTT4 135 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 NIF3L1Q9GZT8 377 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 LINC00597Q9H2U6 94 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 EBF3Q9H4W6 596 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 FBRSL1Q9HCM7 1045 aaKnown RBP12.53□□□□□ -0.4
LETMD1-221ENST00000550100 KRT82Q9NSB4 513 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 RBM12Q9NTZ6 932 aaKnown RBP12.53□□□□□ -0.4
LETMD1-221ENST00000550100 C2orf42Q9NWW7 574 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 UXTQ9UBK9 157 aaPredicted RBP12.53□□□□□ -0.4
LETMD1-221ENST00000550100 COQ4Q9Y3A0 265 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 MYH10P35580 1976 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 SCAMP3O14828 347 aaKnown RBP12.53□□□□□ -0.4
LETMD1-221ENST00000550100 AP1G2O75843 785 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 CHRNB1P11230 501 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 HDCP19113 662 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 ANXA13P27216 316 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 ADORA2BP29275 332 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 AVPR1AP37288 418 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 RAD23BP54727 409 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 MAP3K7CLP57077 242 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 IFRD2Q12894 506 aaPredicted RBP12.53□□□□□ -0.4
LETMD1-221ENST00000550100 ZNF77Q15935 545 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 ARHGAP29Q52LW3 1261 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 ZNF394Q53GI3 561 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 TCERG1LQ5VWI1 586 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 FRMD5Q7Z6J6 570 aa12.53□□□□□ -0.4
LETMD1-221ENST00000550100 FILIP1Q7Z7B0 1213 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms