RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 E2F7Q96AV8 911 aa16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 EEF2KMTQ96G04 330 aa16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 ZNF512Q96ME7 567 aaPredicted RBP16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 CEP63Q96MT8 703 aa16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 TMEM209Q96SK2 561 aa16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 DUSP9Q99956 384 aaKnown RBP16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 ACBD6Q9BR61 282 aa16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 XYLT2Q9H1B5 865 aa16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 C8orf33Q9H7E9 229 aaPredicted RBP16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 HSFX1Q9UBD0 423 aa16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 ATG2BQ96BY7 2078 aa16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 SLC38A8A6NNN8 435 aa16.79■□□□□ 0.28
CHMP1A-206ENST00000549139 ZNF806P0C7X5 589 aa16.79■□□□□ 0.28
CHMP1A-206ENST00000549139 MYL4P12829 197 aa16.79■□□□□ 0.28
CHMP1A-206ENST00000549139 KCNA4P22459 653 aa16.79■□□□□ 0.28
CHMP1A-206ENST00000549139 CTHP32929 405 aa16.79■□□□□ 0.28
CHMP1A-206ENST00000549139 MYL7Q01449 175 aa16.79■□□□□ 0.28
CHMP1A-206ENST00000549139 PPP3CAQ08209 521 aa16.79■□□□□ 0.28
CHMP1A-206ENST00000549139 PAK1Q13153 545 aa16.79■□□□□ 0.28
CHMP1A-206ENST00000549139 NCOA4Q13772 614 aa16.79■□□□□ 0.28
CHMP1A-206ENST00000549139 CCINQ13939 588 aa16.79■□□□□ 0.28
CHMP1A-206ENST00000549139 SGSM1Q2NKQ1 1148 aa16.79■□□□□ 0.28
CHMP1A-206ENST00000549139 WDR72Q3MJ13 1102 aa16.79■□□□□ 0.28
CHMP1A-206ENST00000549139 AASDHQ4L235 1098 aaPredicted RBP16.79■□□□□ 0.28
CHMP1A-206ENST00000549139 DGKKQ5KSL6 1271 aa16.79■□□□□ 0.28
CHMP1A-206ENST00000549139 DCP1BQ8IZD4 617 aaKnown RBP16.79■□□□□ 0.28
CHMP1A-206ENST00000549139 ADGRF2Q8IZF7 708 aa16.79■□□□□ 0.28
CHMP1A-206ENST00000549139 ELMOD1Q8N336 334 aa16.79■□□□□ 0.28
CHMP1A-206ENST00000549139 MLKLQ8NB16 471 aa16.79■□□□□ 0.28
CHMP1A-206ENST00000549139 CSGALNACT1Q8TDX6 532 aa16.79■□□□□ 0.28
CHMP1A-206ENST00000549139 TAF4BQ92750 862 aa16.79■□□□□ 0.28
CHMP1A-206ENST00000549139 LRRC3BQ96PB8 259 aa16.79■□□□□ 0.28
CHMP1A-206ENST00000549139 GPR88Q9GZN0 384 aa16.79■□□□□ 0.28
CHMP1A-206ENST00000549139 ASAH2Q9NR71 780 aa16.79■□□□□ 0.28
CHMP1A-206ENST00000549139 DDX43Q9NXZ2 648 aaKnown RBP16.79■□□□□ 0.28
CHMP1A-206ENST00000549139 MTMR11A4FU01 709 aa16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 SPECC1L-ADORA2AF8WAN1 911 aa16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 STX10O60499 249 aa16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 TACC1O75410 805 aa16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 VNN2O95498 520 aa16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 TRIM49P0CI25 452 aa16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 TRIM49CP0CI26 452 aa16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 WARSP23381 471 aaKnown RBP16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 RAP1GAPP47736 663 aa16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 GCLMP48507 274 aa16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 TNNC1P63316 161 aa16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 ZNF667Q5HYK9 610 aa16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 KRT39Q6A163 491 aa16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 CEP68Q76N32 757 aa16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 LRRTM3Q86VH5 581 aa16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 OSTM1Q86WC4 334 aa16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 TMC8Q8IU68 726 aa16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 C2orf15Q8WU43 125 aaKnown RBP16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 LOXL4Q96JB6 756 aa16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 PGLYRP2Q96PD5 576 aa16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 MMS19Q96T76 1030 aa16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 ARRDC1-AS1Q9H2J1 176 aa16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 METTL14Q9HCE5 456 aaKnown RBP16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 TMEM8AQ9HCN3 771 aa16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 CTNND2Q9UQB3 1225 aa16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 PTPRDP23468 1912 aa16.78■□□□□ 0.28
CHMP1A-206ENST00000549139 EML5Q05BV3 1969 aa16.77■□□□□ 0.28
CHMP1A-206ENST00000549139 AXIN1O15169 862 aa16.77■□□□□ 0.28
CHMP1A-206ENST00000549139 EPN2O95208 641 aa16.77■□□□□ 0.28
CHMP1A-206ENST00000549139 HLA-DRAP01903 254 aa16.77■□□□□ 0.28
CHMP1A-206ENST00000549139 PROS1P07225 676 aa16.77■□□□□ 0.28
CHMP1A-206ENST00000549139 PCSK1P29120 753 aa16.77■□□□□ 0.28
CHMP1A-206ENST00000549139 KPNA1P52294 538 aaPredicted RBP16.77■□□□□ 0.28
CHMP1A-206ENST00000549139 TSPY1Q01534 308 aa16.77■□□□□ 0.28
CHMP1A-206ENST00000549139 DUSP4Q13115 394 aa16.77■□□□□ 0.28
CHMP1A-206ENST00000549139 CCDC6Q16204 474 aa16.77■□□□□ 0.28
CHMP1A-206ENST00000549139 ZNF699Q32M78 642 aa16.77■□□□□ 0.28
CHMP1A-206ENST00000549139 SLC39A12Q504Y0 691 aa16.77■□□□□ 0.28
CHMP1A-206ENST00000549139 PLA2G2CQ5R387 149 aa16.77■□□□□ 0.28
CHMP1A-206ENST00000549139 RALGPS2Q86X27 583 aaPredicted RBP16.77■□□□□ 0.28
CHMP1A-206ENST00000549139 SYNPOQ8N3V7 929 aa16.77■□□□□ 0.28
CHMP1A-206ENST00000549139 ATAD1Q8NBU5 361 aa16.77■□□□□ 0.28
CHMP1A-206ENST00000549139 SPPL2BQ8TCT7 592 aa16.77■□□□□ 0.28
CHMP1A-206ENST00000549139 KBTBD7Q8WVZ9 684 aa16.77■□□□□ 0.28
CHMP1A-206ENST00000549139 DNAJC25Q9H1X3 360 aa16.77■□□□□ 0.28
CHMP1A-206ENST00000549139 NXF1Q9UBU9 619 aaKnown RBP16.77■□□□□ 0.28
CHMP1A-206ENST00000549139 ARMCX3Q9UH62 379 aaPredicted RBP16.77■□□□□ 0.28
CHMP1A-206ENST00000549139 RWDD2AQ9UIY3 292 aa16.77■□□□□ 0.28
CHMP1A-206ENST00000549139 YIPF1Q9Y548 306 aa16.77■□□□□ 0.28
CHMP1A-206ENST00000549139 AKAP13Q12802 2813 aa16.77■□□□□ 0.27
CHMP1A-206ENST00000549139 DENND4CQ5VZ89 1909 aa16.76■□□□□ 0.27
CHMP1A-206ENST00000549139 KIF26AQ9ULI4 1882 aaPredicted RBP16.76■□□□□ 0.27
CHMP1A-206ENST00000549139 KCNK5O95279 499 aa16.76■□□□□ 0.27
CHMP1A-206ENST00000549139 MBD3O95983 291 aa16.76■□□□□ 0.27
CHMP1A-206ENST00000549139 ASS1P00966 412 aaKnown RBP16.76■□□□□ 0.27
CHMP1A-206ENST00000549139 GNL1P36915 607 aaPredicted RBP16.76■□□□□ 0.27
CHMP1A-206ENST00000549139 TUFMP49411 452 aaKnown RBP16.76■□□□□ 0.27
CHMP1A-206ENST00000549139 STX17P56962 302 aa16.76■□□□□ 0.27
CHMP1A-206ENST00000549139 NLRP12P59046 1061 aa16.76■□□□□ 0.27
CHMP1A-206ENST00000549139 NFE2Q16621 373 aaPredicted RBP16.76■□□□□ 0.27
CHMP1A-206ENST00000549139 INTS6LQ5JSJ4 861 aaKnown RBP16.76■□□□□ 0.27
CHMP1A-206ENST00000549139 STXBP5Q5T5C0 1151 aa16.76■□□□□ 0.27
CHMP1A-206ENST00000549139 STPG1Q5TH74 334 aa16.76■□□□□ 0.27
CHMP1A-206ENST00000549139 ARID3BQ8IVW6 561 aaPredicted RBP16.76■□□□□ 0.27
CHMP1A-206ENST00000549139 YAF2Q8IY57 180 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms